Trimin1|346785|estExt_Genemark1.C_Ctg_50070 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|346785
Unique NameTrimin1|346785|estExt_Genemark1.C_Ctg_50070
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length630
Homology
BLAST of jgi.p|Trimin1|346785 vs. uniprot
Match: A0A835YTG9_9STRA (Sulfotransfer_1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTG9_9STRA)

HSP 1 Score: 737 bits (1903), Expect = 3.040e-260
Identity = 629/629 (100.00%), Postives = 629/629 (100.00%), Query Frame = 0
Query:    1 MTGRLGELFDVADALRVKMDLVIHLVRDPRAVLASRYSVGWLHPVMHTXXXXXXXXXXYEDTFKWAQSLCTGMMDDALAVASRPEYMLLRYEDLXXXXXXXXXXXXXXXXXXGGAEARARIVYQRIGSPLLEAAXXXXXXXRNGXXXXXXXXXXXXXXXXXXEAVLRAARXXXXXXXXXXXXXXXXXXXXXXXVYDGCGSGSEWERQLCVQDRERMAKEDDGCAQRALLLSQLCVEXXXXXXXXSEGAAQTEECVQLRERLTLRHSAEVKDKLEDKLICLDVGYNTRPRDFAEAKDKWKKSLAEEEVRAVEDAADDALSPRAXXXXXXXXXXXXXAVAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSCAAALPCKRPQLLDIVTAGAGVAAATAAATGTRHYTQSWGTGAAARPIDRTSMCTGVAAXXXXXXXXXXXXXXXXXXTLKLAACAGEGMPQCVFSTKGRGHRRDIPEHWLVLQLAHAAKQSKTMLGGATSCAERASSAQSNAFTLXXXXXXXXXXXXXXXXXXXGPLSNXXXXXXSTAAGGGSAALKHVIISGEGRSGSTLVGTLFKAPEWAYFYE 629
            MTGRLGELFDVADALRVKMDLVIHLVRDPRAVLASRYSVGWLHPVMHTXXXXXXXXXXYEDTFKWAQSLCTGMMDDALAVASRPEYMLLRYEDLXXXXXXXXXXXXXXXXXXGGAEARARIVYQRIGSPLLEAAXXXXXXXRNGXXXXXXXXXXXXXXXXXXEAVLRAARXXXXXXXXXXXXXXXXXXXXXXXVYDGCGSGSEWERQLCVQDRERMAKEDDGCAQRALLLSQLCVEXXXXXXXXSEGAAQTEECVQLRERLTLRHSAEVKDKLEDKLICLDVGYNTRPRDFAEAKDKWKKSLAEEEVRAVEDAADDALSPRAXXXXXXXXXXXXXAVAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSCAAALPCKRPQLLDIVTAGAGVAAATAAATGTRHYTQSWGTGAAARPIDRTSMCTGVAAXXXXXXXXXXXXXXXXXXTLKLAACAGEGMPQCVFSTKGRGHRRDIPEHWLVLQLAHAAKQSKTMLGGATSCAERASSAQSNAFTLXXXXXXXXXXXXXXXXXXXGPLSNXXXXXXSTAAGGGSAALKHVIISGEGRSGSTLVGTLFKAPEWAYFYE
Sbjct:    1 MTGRLGELFDVADALRVKMDLVIHLVRDPRAVLASRYSVGWLHPVMHTXXXXXXXXXXYEDTFKWAQSLCTGMMDDALAVASRPEYMLLRYEDLXXXXXXXXXXXXXXXXXXGGAEARARIVYQRIGSPLLEAAXXXXXXXRNGXXXXXXXXXXXXXXXXXXEAVLRAARXXXXXXXXXXXXXXXXXXXXXXXVYDGCGSGSEWERQLCVQDRERMAKEDDGCAQRALLLSQLCVEXXXXXXXXSEGAAQTEECVQLRERLTLRHSAEVKDKLEDKLICLDVGYNTRPRDFAEAKDKWKKSLAEEEVRAVEDAADDALSPRAXXXXXXXXXXXXXAVAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSCAAALPCKRPQLLDIVTAGAGVAAATAAATGTRHYTQSWGTGAAARPIDRTSMCTGVAAXXXXXXXXXXXXXXXXXXTLKLAACAGEGMPQCVFSTKGRGHRRDIPEHWLVLQLAHAAKQSKTMLGGATSCAERASSAQSNAFTLXXXXXXXXXXXXXXXXXXXGPLSNXXXXXXSTAAGGGSAALKHVIISGEGRSGSTLVGTLFKAPEWAYFYE 629          
BLAST of jgi.p|Trimin1|346785 vs. uniprot
Match: A0A835Z1F9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1F9_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.090e-26
Identity = 71/133 (53.38%), Postives = 84/133 (63.16%), Query Frame = 0
Query:    1 MTGRLGELFDVADALRVKMDLVIHLVRDPRAVLASRYSVGWLHPVMHTXXXXXXXXXXYEDTFKWAQSLCTGMMDDALAVASRPEYMLLRYEDLXXXXXXXXXXXXXXXXXXGGAEARARIVYQRIGSPLLEA 133
            +TG+L ELF VAD L V +DLV+HLVRDPRAVLASRYSV WL+PV  T          Y  T++WA+S C GMM DA A A R EY+LLRYEDL                  G +E RA +VYQRIG+P+ EA
Sbjct:  247 ITGKLEELFAVADELGVALDLVVHLVRDPRAVLASRYSVHWLYPVGRT----------YGPTYRWAKSTCDGMMLDASAGAGRAEYLLLRYEDLA-----------------GDSEERAHMVYQRIGAPVPEA 352          
BLAST of jgi.p|Trimin1|346785 vs. uniprot
Match: A0A835Z755_9STRA (Sulfotransfer_1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z755_9STRA)

HSP 1 Score: 110 bits (275), Expect = 6.970e-22
Identity = 98/247 (39.68%), Postives = 118/247 (47.77%), Query Frame = 0
Query:    1 MTGRLGELFDVADALRVKMDLVIHLVRDPRAVLASRYS----------------------VGWLHPVMHTXXXXXXXXXXYEDTFKWAQSLCTGMMDDALAVASRPEYMLLRYEDLXXXXXXXXXXXXXXXXXX--------GGAEARARIVYQRIGSPLLEAAXXXXXXXRNGXXXXXXXXXXXXXXXXXXEAVLRAARXXXXXXXXXXXXXXXXXXXXXXXVYDGCGSGSEWERQLCVQDRERMA 217
            MTGRLGELF  ADA+ V++DL++HLVRDPRAVLASRY                       +GW+HP   T          Y  T  WA S+C  +M DA + A R EY+LLRYEDL   XXXXXXXXXXXXXXX        G AE RAR+VY RIG+P+                                  VLRAAR                       VYDGC +G + ER+ C +D+  M+
Sbjct:  278 MTGRLGELFAAADAVGVQLDLLVHLVRDPRAVLASRYGXXXXXXXXXXXXXXXXXXXXXXIGWMHPTSRT----------YNATRAWASSICGDIMHDARSSAQRDEYLLLRYEDLAGDXXXXXXXXXXXXXXXXXXAEGRAGDAEDRARMVYARIGAPV-------------------------------PRDVLRAAR-----------------------VYDGCVAGPDDERRQCRRDKAAMS 460          
BLAST of jgi.p|Trimin1|346785 vs. uniprot
Match: A0A836CIV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIV6_9STRA)

HSP 1 Score: 109 bits (273), Expect = 2.850e-21
Identity = 76/176 (43.18%), Postives = 84/176 (47.73%), Query Frame = 0
Query:    1 MTGRLGELFDVADALRVKMDLVIHLVRDPRAVLASRY----------------------SVGWLHPVMHTXXXXXXXXXXYEDTFKWAQSL---------------------CTGMMDDALAVASRPEYMLLRYEDLXXXXXXXXXXXXXXXXXXGGAEARARIVYQRIGSPLLEA 133
            MTGRLGELF+VAD L  K DLV+HLVRDPRAVLASR+                      SVGWL P  HT          Y  TF W++S+                     C GMMDDA A A RPEY+L RYEDL                   GAEARA  VY RIG+P  EA
Sbjct:  264 MTGRLGELFEVADELGEKFDLVLHLVRDPRAVLASRWTLXXXXXXXXXXXXXXXSAGLRSVGWLTPREHT----------YRATFAWSKSIVXXXXXXXXXXXXXXXXXXXMCDGMMDDAAAGAGRPEYLLQRYEDLAH-----------------GAEARAAAVYARIGAPAPEA 412          
BLAST of jgi.p|Trimin1|346785 vs. uniprot
Match: A0A835ZE24_9STRA (Sulfotransfer_1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE24_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.960e-20
Identity = 61/127 (48.03%), Postives = 71/127 (55.91%), Query Frame = 0
Query:    1 MTGRLGELFDVADALRVKMDLVIHLVRDPRAVLASRYSVGWLHPVMHTXXXXXXXXXXYEDTFKWAQSLCTGMMDDALAVASRPEYMLLRYEDLXXXXXXXXXXXXXXXXXXGGAEARARIVYQRIG 127
            MTGRLGEL+   DAL  ++DLVI LVRDPRAVLASRYS+GW HPV  +          Y  T  WA S C  +M D +    RPEYMLLRYEDL                  G AE  AR +Y ++G
Sbjct:  419 MTGRLGELYAATDALGAQLDLVIQLVRDPRAVLASRYSIGWSHPVARS----------YNATRAWAASACGDIMYDHVNSTQRPEYMLLRYEDLA-----------------GNAEKHARDIYAKMG 518          
BLAST of jgi.p|Trimin1|346785 vs. uniprot
Match: A0A836CHU1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHU1_9STRA)

HSP 1 Score: 100 bits (249), Expect = 3.370e-18
Identity = 58/127 (45.67%), Postives = 71/127 (55.91%), Query Frame = 0
Query:    1 MTGRLGELFDVADALRVKMDLVIHLVRDPRAVLASRYSVGWLHPVMHTXXXXXXXXXXYEDTFKWAQSLCTGMMDDALAVASRPEYMLLRYEDLXXXXXXXXXXXXXXXXXXGGAEARARIVYQRIG 127
            M GRLGE+ ++A A+    DLVIHL+RDPRAVLASRYSVGW +P              Y  T  WA +LC G M DA A A+ PEYM+LRYED+                   GAE +A  +Y R+G
Sbjct:  803 MVGRLGEMLEMARAVGQMPDLVIHLIRDPRAVLASRYSVGWGYP----------GNRGYRSTLDWATNLCGGTMADATAGAAHPEYMVLRYEDMAQ-----------------GAEWQAEGLYDRLG 902          
BLAST of jgi.p|Trimin1|346785 vs. uniprot
Match: A0A835ZCJ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCJ1_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 4.210e-15
Identity = 55/127 (43.31%), Postives = 65/127 (51.18%), Query Frame = 0
Query:    1 MTGRLGELFDVADALRVKMDLVIHLVRDPRAVLASRYSVGWLHPVMHTXXXXXXXXXXYEDTFKWAQSLCTGMMDDALAVASRPEYMLLRYEDLXXXXXXXXXXXXXXXXXXGGAEARARIVYQRIG 127
            M GRLGEL ++A AL    DLVIHL+RDPRAVLASRYSVGW  P              Y+ T  WA  +C+G + DA       EY+LLRYED+                   GAE  A  +Y R G
Sbjct:  359 MPGRLGELLEMAAALGQTPDLVIHLIRDPRAVLASRYSVGWGVP----------ENRGYDATLDWANIMCSGTLLDAERGEGHDEYVLLRYEDMAR-----------------GAELAAEAIYARFG 458          
BLAST of jgi.p|Trimin1|346785 vs. uniprot
Match: A0A836CGD5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGD5_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.660e-13
Identity = 48/126 (38.10%), Postives = 67/126 (53.17%), Query Frame = 0
Query:    1 MTGRLGELFDVADALRVKMDLVIHLVRDPRAVLASRYSVGWLHPVMHTXXXXXXXXXXYEDTFKWAQSLCTGMMDDALAVASRPEYMLLRYEDLXXXXXXXXXXXXXXXXXXGGAEARARIVYQRI 126
            + G + +LF +++ L +++DLVIHL+RDPRAVLASRYSVGW  P   +          Y+ T  WA+ +C   M D+ A   R  YM LRYEDL                    A AR + +Y+R+
Sbjct:  210 INGHMDQLFALSEKLGLRVDLVIHLMRDPRAVLASRYSVGWGMPENRS----------YDATLAWARDMCGRTMADSRAGGGRVNYMALRYEDLA-----------------AAAVARTQAIYERL 308          
BLAST of jgi.p|Trimin1|346785 vs. uniprot
Match: A0A835Z7T0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T0_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 3.140e-12
Identity = 43/94 (45.74%), Postives = 51/94 (54.26%), Query Frame = 0
Query:    1 MTGRLGELFDVADALRVKMDLVIHLVRDPRAVLASRYSVGWLHPVMHTXXXXXXXXXXYEDTFKWAQSLCTGMMDDALAVASRPEYMLLRYEDL 94
            M GRL E  D A+ +   +DL IHL+RDPRAVLASR  V W  P   T          YE TF WA  +C+  M D  A   RP Y L++YE L
Sbjct:  166 MNGRLAEFMDAAERVGSGVDLWIHLLRDPRAVLASRLGVTWGRPDNRT----------YEATFAWADDMCSATMTDLAATEGRPNYKLVQYEHL 249          
BLAST of jgi.p|Trimin1|346785 vs. uniprot
Match: A0A835Z112_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z112_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 6.350e-5
Identity = 35/87 (40.23%), Postives = 44/87 (50.57%), Query Frame = 0
Query:    1 MTGRLGELFDVADALR------VKMDLVIHLVRDPRAVLASRYSVGWLHPVMHTXXXXXXXXXXYEDTFKWAQSLCTGMMDDALAVA 81
            M GRL E  +VA AL        ++DL IHL+RDPRAVLASR  + W  P              Y+ T++WA+ LC     D  A A
Sbjct:  278 MNGRLAEFMEVASALGGSISGGARVDLWIHLLRDPRAVLASRLGLTWGKPA----------DRGYKATYRWAEELCALTAKDLAADA 354          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|346785 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A835YTG9_9STRA3.040e-260100.00Sulfotransfer_1 domain-containing protein n=1 Tax=... [more]
A0A835Z1F9_9STRA1.090e-2653.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z755_9STRA6.970e-2239.68Sulfotransfer_1 domain-containing protein n=1 Tax=... [more]
A0A836CIV6_9STRA2.850e-2143.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZE24_9STRA1.960e-2048.03Sulfotransfer_1 domain-containing protein n=1 Tax=... [more]
A0A836CHU1_9STRA3.370e-1845.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZCJ1_9STRA4.210e-1543.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CGD5_9STRA1.660e-1338.10P-loop containing nucleoside triphosphate hydrolas... [more]
A0A835Z7T0_9STRA3.140e-1245.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z112_9STRA6.350e-540.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 5..163
e-value: 7.5E-8
score: 34.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 22..96
IPR000863Sulfotransferase domainPFAMPF00685Sulfotransfer_1coord: 22..95
e-value: 8.2E-6
score: 25.5
NoneNo IPR availablePANTHERPTHR10704CARBOHYDRATE SULFOTRANSFERASEcoord: 102..318
coord: 22..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_5contigContig_5:756142..763494 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|346785mRNA_2322Tribonema minus UTEX_B_3156 mRNAContig_5 756142..766833 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|346785|estExt_Genemark1.C_Ctg_50070 ID=Trimin1|346785|estExt_Genemark1.C_Ctg_50070|Name=jgi.p|Trimin1|346785|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=630bp
MTGRLGELFDVADALRVKMDLVIHLVRDPRAVLASRYSVGWLHPVMHTVG
WLHPVLHTYEDTFKWAQSLCTGMMDDALAVASRPEYMLLRYEDLAALASH
LEYMPLRYEDLAGGAEARARIVYQRIGSPLLEAARARIVYQRNGGAVARA
RGVYQRIGSPVPEAVLRAARARARVVYQRIGSPVPEAVLRAARVYDGCGS
GSEWERQLCVQDRERMAKEDDGCAQRALLLSQLCVERMAKEDDGSEGAAQ
TEECVQLRERLTLRHSAEVKDKLEDKLICLDVGYNTRPRDFAEAKDKWKK
SLAEEEVRAVEDAADDALSPRAAAAAAAALLAAAAAVAALAAAAEVAAAA
QLQLQPAAAAVAAAALLQLQPAAAAVATAALLAAAAAAAAAAPAAAAAMT
LAAAAVAMAAARSCAAALPCKRPQLLDIVTAGAGVAAATAAATGTRHYTQ
SWGTGAAARPIDRTSMCTGVAAAAALAAAAASVTVAAAVLTLKLAACAGE
GMPQCVFSTKGRGHRRDIPEHWLVLQLAHAAKQSKTMLGGATSCAERASS
AQSNAFTLAEEAVSCHSVAPGYAPHAAGPLSNATGAAPSTAAGGGSAALK
HVIISGEGRSGSTLVGTLFKAPEWAYFYE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR000863Sulfotransferase_dom