Trimin1|346758|estExt_Genemark1.C_Ctg_50016 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|346758
Unique NameTrimin1|346758|estExt_Genemark1.C_Ctg_50016
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length894
Homology
BLAST of jgi.p|Trimin1|346758 vs. uniprot
Match: A0A835YQG6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQG6_9STRA)

HSP 1 Score: 1001 bits (2589), Expect = 0.000e+0
Identity = 839/839 (100.00%), Postives = 839/839 (100.00%), Query Frame = 0
Query:    1 MPQRRQLRRGRVHGSPYSPSQLRRHCGGGSSGSGNAALPAAAAAARAHTNRICTVARASGTTGAGLAGARAARLRSWQRGALSTRCATGLDAATRYVAATARLRASRVQELAARRAVKALRHRRMLARPWRKPPRRSRSEPGPLLLVTPSLADAVMARLNDATYCSVKGEPSEAIYGGSXXXXXXXXXXXXXXXXXXXXXCSARESDADTVATDDEARGEAPCGDDXXXXXXXXXXXXXXXXXXXXXXXXTSAAAHLAECPEMLKGGDDAQRGGTHGGLLCESASCDGGFEVTAADGKDRAGLMIAGCGGSSSCRSARSDCGGSGXXXXXXXXXXXGMFAXXXXXXXXXXXXASPRAACEAYVTDVDDEAALGSPRIASLVQGLMAMLVQPPQGEQPPWQEDTEKEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFAAIAKSMSTALPFAPLKGGYWGSEEADEVLTVASAVAAQAAAPLSDTPQVLSDAEASDGAALPDGGRGPAXXXXXXXXXXXXRQELSLHLNDMAARGDFFALYRVVARQAQVRASIVNFKFNFTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLDDEGQLTHXXXXXXXXXXXXXXXXXXTEAGHTPRQAFLRRLLAVGAPPLPALLRHTAHPDELNLEHKALGDKVVAAVAAVLPRLPCVRSVNVADNRLTDASLVPLCRTVVAMPALARLDLGFNKVDDAARIIRAYLADGSTEA 839
            MPQRRQLRRGRVHGSPYSPSQLRRHCGGGSSGSGNAALPAAAAAARAHTNRICTVARASGTTGAGLAGARAARLRSWQRGALSTRCATGLDAATRYVAATARLRASRVQELAARRAVKALRHRRMLARPWRKPPRRSRSEPGPLLLVTPSLADAVMARLNDATYCSVKGEPSEAIYGGSXXXXXXXXXXXXXXXXXXXXXCSARESDADTVATDDEARGEAPCGDDXXXXXXXXXXXXXXXXXXXXXXXXTSAAAHLAECPEMLKGGDDAQRGGTHGGLLCESASCDGGFEVTAADGKDRAGLMIAGCGGSSSCRSARSDCGGSGXXXXXXXXXXXGMFAXXXXXXXXXXXXASPRAACEAYVTDVDDEAALGSPRIASLVQGLMAMLVQPPQGEQPPWQEDTEKEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFAAIAKSMSTALPFAPLKGGYWGSEEADEVLTVASAVAAQAAAPLSDTPQVLSDAEASDGAALPDGGRGPAXXXXXXXXXXXXRQELSLHLNDMAARGDFFALYRVVARQAQVRASIVNFKFNFTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLDDEGQLTHXXXXXXXXXXXXXXXXXXTEAGHTPRQAFLRRLLAVGAPPLPALLRHTAHPDELNLEHKALGDKVVAAVAAVLPRLPCVRSVNVADNRLTDASLVPLCRTVVAMPALARLDLGFNKVDDAARIIRAYLADGSTEA
Sbjct:    1 MPQRRQLRRGRVHGSPYSPSQLRRHCGGGSSGSGNAALPAAAAAARAHTNRICTVARASGTTGAGLAGARAARLRSWQRGALSTRCATGLDAATRYVAATARLRASRVQELAARRAVKALRHRRMLARPWRKPPRRSRSEPGPLLLVTPSLADAVMARLNDATYCSVKGEPSEAIYGGSXXXXXXXXXXXXXXXXXXXXXCSARESDADTVATDDEARGEAPCGDDXXXXXXXXXXXXXXXXXXXXXXXXTSAAAHLAECPEMLKGGDDAQRGGTHGGLLCESASCDGGFEVTAADGKDRAGLMIAGCGGSSSCRSARSDCGGSGXXXXXXXXXXXGMFAXXXXXXXXXXXXASPRAACEAYVTDVDDEAALGSPRIASLVQGLMAMLVQPPQGEQPPWQEDTEKEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFAAIAKSMSTALPFAPLKGGYWGSEEADEVLTVASAVAAQAAAPLSDTPQVLSDAEASDGAALPDGGRGPAXXXXXXXXXXXXRQELSLHLNDMAARGDFFALYRVVARQAQVRASIVNFKFNFTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLDDEGQLTHXXXXXXXXXXXXXXXXXXTEAGHTPRQAFLRRLLAVGAPPLPALLRHTAHPDELNLEHKALGDKVVAAVAAVLPRLPCVRSVNVADNRLTDASLVPLCRTVVAMPALARLDLGFNKVDDAARIIRAYLADGSTEA 839          
BLAST of jgi.p|Trimin1|346758 vs. uniprot
Match: D7G5K1_ECTSI (Hypothetical leucine rich repeat calcium binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K1_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 5.610e-14
Identity = 46/110 (41.82%), Postives = 68/110 (61.82%), Query Frame = 0
Query:  724 EAGHTPRQAFLRRLLAVGAPPLPALLRHTAHPDELNLEHKALGDKVVAAVAAVLPRLPCVRSVNVADNRLTDASLVPLCRTVVAMPALARLDLGFNKVDDAARIIRAYLA 833
            E+  TPR+ FLR  LA G  P P ++R+   P  L+L  + LGD++  ++A  LP LP + S+N+ +NRLTDASL  +    V +  L  LDL  NK+D +A ++R Y+A
Sbjct:  233 ESEFTPRRLFLRDTLARGITPSPTMMRNRKDPHTLDLGFQGLGDQIGLSLATTLPLLPNLASLNLRENRLTDASLNNILAEAVRLECLTSLDLSCNKIDHSALVLREYVA 342          
BLAST of jgi.p|Trimin1|346758 vs. uniprot
Match: G5ABF5_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5ABF5_PHYSP)

HSP 1 Score: 74.7 bits (182), Expect = 5.970e-10
Identity = 43/106 (40.57%), Postives = 56/106 (52.83%), Query Frame = 0
Query:  728 TPRQAFLRRLLAVGAPPLPALLRHTAHPDELNLEHKALGDKVVAAVAAVLPRLPCVRSVNVADNRLTDASLVPLCRTVVAMPALARLDLGFNKVD-DAARIIRAYL 832
            +PR  FL   LA    PL  LLR   +    +  H+ L D  +   AA LP LP V S+NV DNRLTDA +  L R +   P L  LD+  N +  DAA ++R Y+
Sbjct:  173 SPRALFLGACLAGSQAPLTLLLRKEHNKRAFDFSHQGLDDNFIVRFAACLPELPLVESINVCDNRLTDAGISCLLRALENKPHLTSLDVSSNPMGIDAANVLRGYI 278          
BLAST of jgi.p|Trimin1|346758 vs. uniprot
Match: A0A6A3WSG6_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3WSG6_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 7.500e-10
Identity = 43/106 (40.57%), Postives = 57/106 (53.77%), Query Frame = 0
Query:  728 TPRQAFLRRLLAVGAPPLPALLRHTAHPDELNLEHKALGDKVVAAVAAVLPRLPCVRSVNVADNRLTDASLVPLCRTVVAMPALARLDLGFNKVD-DAARIIRAYL 832
            +PR  FL   LA    P   LLR   +    +  H+ LGD  +   AA LP LP V S+NV DNRLTDA++  L R +   P L  LD+  N +  DAA ++R Y+
Sbjct:  279 SPRALFLGACLAGSQAPPTLLLRKEHNKRAFDFSHQGLGDNFIVRFAACLPELPLVESINVCDNRLTDAAISCLLRALENKPHLTSLDVSSNPMGVDAASVLRGYI 384          
BLAST of jgi.p|Trimin1|346758 vs. uniprot
Match: D7FVI7_ECTSI (Hypothetical leucine rich repeat calcium binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI7_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 5.320e-9
Identity = 41/114 (35.96%), Postives = 57/114 (50.00%), Query Frame = 0
Query:  723 TEAGHTPRQAFLRRLLAVGAPPLPALLRHTAHPDELNLEHKALGDKVVAAVAAVLPRLPCVRSVNVADNRLTDASLVPLCRTVVAMPALARLDLGFNKVDDAARIIRAYLADGS 836
            ++ GHTPRQ F+R++L +G  P+P LLR  +   +LNL H+ LGD V++A A VL RLP + ++N                                  D+AA IIR YLA  S
Sbjct:  638 SQEGHTPRQEFIRKMLKMGRVPVPILLRDPSALQDLNLAHRGLGDDVMSAAAEVLTRLPHINTLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAAAIIRGYLAHPS 751          
BLAST of jgi.p|Trimin1|346758 vs. uniprot
Match: A0A024TAV6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TAV6_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.860e-8
Identity = 44/113 (38.94%), Postives = 61/113 (53.98%), Query Frame = 0
Query:  723 TEAGHTPRQAFLRRLLAVGAPP-LPALLRHTAHPDELNLEHKALGDKVVAAVAAVLPRLPCVRSVNVADNRLTDASLVPLCRTVVAMPALARLDLGFNKVD-DAARIIRAYLA 833
            T    T R  F+   L    PP L  ++R    PD +N+ H ++GD++V      L  LP V S+N+ +NRLTDA +  + R V+  P L  LDL  NKVD D A  + AY+A
Sbjct:  197 TVEAFTARHKFVSLCLDHELPPCLRLIIRSKVSPD-INVSHMSMGDELVQVFCECLVELPMVHSLNLRNNRLTDAGIAAVVRAVMNKPDLCTLDLSENKVDGDGAAALAAYMA 308          
BLAST of jgi.p|Trimin1|346758 vs. uniprot
Match: A0A482ST86_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482ST86_9ARCH)

HSP 1 Score: 67.4 bits (163), Expect = 1.310e-7
Identity = 35/95 (36.84%), Postives = 54/95 (56.84%), Query Frame = 0
Query:  728 TPRQAFLRRLLAVGAPPLPALLRHTAHPDELNLEHKALGDKVVAAVAAVLPRLPCVRSVNVADNRLTDASLVPLCRTVVAMPALARLDLGFNKVD 822
            +PR  +L   +  G  PL  L+        L+L H ++GDK+   +A  L  LPC+ S+N+ DN LTD SL  L   ++++P++  LDL  NK+D
Sbjct:  325 SPRTRYLAGCIREGIQPLSNLIVRRNVTTTLDLSHYSMGDKMGRVLAECLGDLPCLESINLNDNNLTDDSLQYLIEAIISIPSVHELDLSRNKID 419          
BLAST of jgi.p|Trimin1|346758 vs. uniprot
Match: A0A1V9ZJY5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJY5_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 4.700e-7
Identity = 39/110 (35.45%), Postives = 56/110 (50.91%), Query Frame = 0
Query:  728 TPRQAFLRRLLAVGAPPLPALLRHTAHPDELNLEHKALGDKVVAAVAAVLPRLPCVRSVNVADNRLTDASLVPLCRTVVAMPALARLDLGFNKVD-DAARIIRAYLADGS 836
            T R  F  + L     P   LL  +    E+N+ H  +GD V    AA +  +P V S+N+ +NRLTDA L  +   +   P +  LDL  NK+D +A   + AYLA+ S
Sbjct:  115 TARHEFAAQCLTKNVLPSAGLLLRSTISQEINVSHMGIGDDVAVVWAAAIGGVPNVTSLNLRNNRLTDAGLPSVIAALTTKPEIVVLDLSENKLDGEAINALAAYLAEQS 224          
BLAST of jgi.p|Trimin1|346758 vs. uniprot
Match: A0A067CIT8_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CIT8_SAPPC)

HSP 1 Score: 63.2 bits (152), Expect = 2.420e-6
Identity = 35/95 (36.84%), Postives = 50/95 (52.63%), Query Frame = 0
Query:  728 TPRQAFLRRLLAVGAPPLPALLRHTAHPDELNLEHKALGDKVVAAVAAVLPRLPCVRSVNVADNRLTDASLVPLCRTVVAMPALARLDLGFNKVD 822
            T R  F  R L    PP   LL       E+++ H  +GD +    AA +  +P V S+N+ +NRLTDA L  +   ++A P +A LDL  NK+D
Sbjct:  116 TARHEFASRCLERELPPSAGLLLRKTQTAEIDISHYGMGDDLARVWAASIVDVPNVTSLNLRNNRLTDAGLPSIIAALIAKPCIAILDLSENKLD 210          
BLAST of jgi.p|Trimin1|346758 vs. uniprot
Match: A0A7S3ZIZ3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZIZ3_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 7.710e-6
Identity = 38/93 (40.86%), Postives = 50/93 (53.76%), Query Frame = 0
Query:  733 FLRRLLAVGAPPLPALLRHTAHPDELNLEHKALGDKVVAAVAAVLPRLPCVRSVNVADNRLTDASLVPLCRTVVAMPALARLDLGFNKVDDAA 825
            F + L+ +G  P PALL+ T     L L      D V  A+A VLPRLP +  V++ADNRL D +L  +   V     +  LDL  NK+DD A
Sbjct:  288 FNKVLVDLGVAPKPALLKQT-RDGVLALRALCPNDAVARAIAKVLPRLPHLYKVDIADNRLGDVALKEIVDAVNTTSTITSLDLSRNKIDDEA 379          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|346758 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A835YQG6_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G5K1_ECTSI5.610e-1441.82Hypothetical leucine rich repeat calcium binding p... [more]
G5ABF5_PHYSP5.970e-1040.57Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A6A3WSG6_9STRA7.500e-1040.57Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
D7FVI7_ECTSI5.320e-935.96Hypothetical leucine rich repeat calcium binding p... [more]
A0A024TAV6_9STRA1.860e-838.94Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A482ST86_9ARCH1.310e-736.84Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A1V9ZJY5_9STRA4.700e-735.45Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A067CIT8_SAPPC2.420e-636.84Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A7S3ZIZ3_9STRA7.710e-640.86Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 433..453
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..220
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 325..351
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 388..461
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 419..443
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..220
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 505..532
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 444..459
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 748..875
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 730..875
e-value: 3.3E-13
score: 50.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_5contigContig_5:192932..203014 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|346758mRNA_2269Tribonema minus UTEX_B_3156 mRNAContig_5 192932..203328 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|346758|estExt_Genemark1.C_Ctg_50016 ID=Trimin1|346758|estExt_Genemark1.C_Ctg_50016|Name=jgi.p|Trimin1|346758|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=894bp
MPQRRQLRRGRVHGSPYSPSQLRRHCGGGSSGSGNAALPAAAAAARAHTN
RICTVARASGTTGAGLAGARAARLRSWQRGALSTRCATGLDAATRYVAAT
ARLRASRVQELAARRAVKALRHRRMLARPWRKPPRRSRSEPGPLLLVTPS
LADAVMARLNDATYCSVKGEPSEAIYGGSGGGGAAAAAAEPVEDGSDDGG
CSARESDADTVATDDEARGEAPCGDDAGGCAARRGGSGSAGAAAAADEQM
TSAAAHLAECPEMLKGGDDAQRGGTHGGLLCESASCDGGFEVTAADGKDR
AGLMIAGCGGSSSCRSARSDCGGSGGGDRGADDGGDGMFAGSGGGGGSGG
GGASPRAACEAYVTDVDDEAALGSPRIASLVQGLMAMLVQPPQGEQPPWQ
EDTEKEGRQQQQRQQRQPQEAQQEEEEETERGRQQREQELQHHHQQQQQQ
QQQPPAFAAIAKSMSTALPFAPLKGGYWGSEEADEVLTVASAVAAQAAAP
LSDTPQVLSDAEASDGAALPDGGRGPASDFAALPDGGRGRQELSLHLNDM
AARGDFFALYRVVARQAQVRASIVNFKFNFTKQELSLHLNDTAARGDFFA
LYRVVARQAQVRASIVNFKFNFTKQELSLHLNDTAARGDFFALYRVVARQ
AQVRASIVNFKFNFTKQELSLHLNDTAVRGDFFALYRVVARQAQVLDDEG
QLTHVLDDEEQLAHVLDDEGQLTEAGHTPRQAFLRRLLAVGAPPLPALLR
HTAHPDELNLEHKALGDKVVAAVAAVLPRLPCVRSVNVADNRLTDASLVP
LCRTVVAMPALARLDLGFNKVDDAARIIRAYLADGSTEACCTIVAMSALA
RLDLSFNKVDDTARIIRAYLADGSFKKVDDAARIIRAYLADGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf