Trimin1|346748|estExt_Genemark1.C_Ctg_40232 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|346748
Unique NameTrimin1|346748|estExt_Genemark1.C_Ctg_40232
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length209
Homology
BLAST of jgi.p|Trimin1|346748 vs. uniprot
Match: A0A835Z388_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z388_9STRA)

HSP 1 Score: 384 bits (987), Expect = 1.460e-134
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0
Query:    1 MADGRAPLGLVVPAVDSPLFASAVSALRKHKPQLAVSPSQLGVIYSSLLQLPARRLVRLGLVSQEDMRSAITAQVTTSDLSGEQSRAFRIDNGIVAGLAGLAVSGSGAAALSVPAAGPIRKLLLEYGVDLPPRQIALLLHAIQAPPILFAKLGLIPAEALRKTPDGLPATEHCTSGSPPCEASAPPGGSGDADGARCTLLGSQGSAGF 208
            MADGRAPLGLVVPAVDSPLFASAVSALRKHKPQLAVSPSQLGVIYSSLLQLPARRLVRLGLVSQEDMRSAITAQVTTSDLSGEQSRAFRIDNGIVAGLAGLAVSGSGAAALSVPAAGPIRKLLLEYGVDLPPRQIALLLHAIQAPPILFAKLGLIPAEALRKTPDGLPATEHCTSGSPPCEASAPPGGSGDADGARCTLLGSQGSAGF
Sbjct:    1 MADGRAPLGLVVPAVDSPLFASAVSALRKHKPQLAVSPSQLGVIYSSLLQLPARRLVRLGLVSQEDMRSAITAQVTTSDLSGEQSRAFRIDNGIVAGLAGLAVSGSGAAALSVPAAGPIRKLLLEYGVDLPPRQIALLLHAIQAPPILFAKLGLIPAEALRKTPDGLPATEHCTSGSPPCEASAPPGGSGDADGARCTLLGSQGSAGF 208          
BLAST of jgi.p|Trimin1|346748 vs. uniprot
Match: A0A835YIH5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIH5_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.390e-17
Identity = 66/155 (42.58%), Postives = 84/155 (54.19%), Query Frame = 0
Query:    2 ADGRAPLGLVVPAVDSPLFASAVSALRKHKPQLA-VSPSQLGVIYSSLLQLPARRLVRLGLVSQEDMRSAITAQVTTSDLSGEQSRAFRIDNGIVAGLAGLAVSGSGAAALSVPAAGPIRKLLLEYGVDLPPRQIALLLHAIQAPPILFAKLGLI 155
            A   A  GLV PA  SPL+A A   L      L  ++P  L  +++ LL LPARRLVRLGLVS + MR+ + AQ  +S        +   D  +V G    A     A        GPIR LL ++GVDLPPRQ+A LL A+Q PP +F K GL+
Sbjct:  182 AQAAAAPGLVTPAFKSPLYAKAAKTLVSRDRVLRNITPEMLATLFT-LLDLPARRLVRLGLVSHDAMRTEMVAQKISSSGDAAAGSSDGKDFVVVDGETKKAFEDKPANV------GPIRSLLQQHGVDLPPRQMAALLTALQTPPSMFVKKGLV 329          
BLAST of jgi.p|Trimin1|346748 vs. uniprot
Match: A0A835YIX8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIX8_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.880e-16
Identity = 67/156 (42.95%), Postives = 87/156 (55.77%), Query Frame = 0
Query:    9 GLVVPAVDSPLFASAVSAL--RKHKPQLAVSPSQLGVIYSSLLQLPARRLVRLGLVSQEDMRSAITAQVTTSDLSGEQSRAFRIDNGIVAGLAGLAVSGSGAAALSVPAA--GPIRKLLLEYGVDLPPRQIALLLHAIQAPPILFAKLGLIPAEAL 160
            GL  PA DS L+  A   L  R       V+P+ L  I+S LLQLPARRLVRLGLV ++ MR+ + AQ      SGE              L+G +    G    S PAA  GPIR +L ++GVDL PRQ+A LL A++ PP ++ K G++  EAL
Sbjct:   27 GLATPAADSALYVHAAKVLVERDSASLRKVTPAHLATIFS-LLQLPARRLVRLGLVPRDVMRAEMLAQKKQPVASGENKD-----------LSGSSTDKDGNDT-SEPAANVGPIRAVLQQHGVDLGPRQMAALLTALETPPRMWVKRGVVSKEAL 169          
BLAST of jgi.p|Trimin1|346748 vs. uniprot
Match: A0A835YLU8_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLU8_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 8.300e-14
Identity = 64/163 (39.26%), Postives = 84/163 (51.53%), Query Frame = 0
Query:    9 GLVVPAVDSPLFASAVSAL--RKHKPQLAVSPSQLGVIYSSLLQLPARRLVRLGLVSQEDMRSAITAQ-------VTTSDLSGEQSRAFRIDNGIVAGLAGLAVSGSGAAALSVPAA--GPIRKLLLEYGVDLPPRQIALLLHAIQAPPILFAKLGLIPAEAL 160
            GL  PA DS L+  A   L  R       V+P+ L  I++ LLQLPARRLVRLGLV ++ MR+ + AQ       V+  D     S   +  N                   S PAA  GPIR  L ++GVDL PRQ+A LL A++ PP ++ K G++  EAL
Sbjct:   15 GLATPAADSALYVHAAKVLGQRDSASLRKVTPAHLATIFT-LLQLPARRLVRLGLVPRDVMRAEMLAQKKKPEPTVSEGDKDLSASNTDKDGNDT-----------------SEPAANVGPIRAALQQHGVDLGPRQMAALLTALETPPRMWVKRGVVSKEAL 159          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|346748 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835Z388_9STRA1.460e-134100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YIH5_9STRA1.390e-1742.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YIX8_9STRA2.880e-1642.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YLU8_9STRA8.300e-1439.26Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_4contigContig_4:2001984..2002669 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|346748mRNA_1775Tribonema minus UTEX_B_3156 mRNAContig_4 2001846..2002669 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|346748|estExt_Genemark1.C_Ctg_40232 ID=Trimin1|346748|estExt_Genemark1.C_Ctg_40232|Name=jgi.p|Trimin1|346748|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=209bp
MADGRAPLGLVVPAVDSPLFASAVSALRKHKPQLAVSPSQLGVIYSSLLQ
LPARRLVRLGLVSQEDMRSAITAQVTTSDLSGEQSRAFRIDNGIVAGLAG
LAVSGSGAAALSVPAAGPIRKLLLEYGVDLPPRQIALLLHAIQAPPILFA
KLGLIPAEALRKTPDGLPATEHCTSGSPPCEASAPPGGSGDADGARCTLL
GSQGSAGF*
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