Trimin1|346738|estExt_Genemark1.C_Ctg_40216 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|346738
Unique NameTrimin1|346738|estExt_Genemark1.C_Ctg_40216
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length157
Homology
BLAST of jgi.p|Trimin1|346738 vs. uniprot
Match: A0A835YU27_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU27_9STRA)

HSP 1 Score: 336 bits (861), Expect = 4.560e-117
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
Query:    1 MCGGHPGTVTGLLFGPTLGNVPLILLRWAGYPGIGRYDGPHPEFPEDPFHDFIEPYKSMSRRGRYEPLLVHAGTQDDITVGEAKGMVKWVELYRSFNRANTERMETALHGALHEEVPLGVLLTPFILFLMVFNNEGHVNDNPGVVFNPPVKQAYGL 156
            MCGGHPGTVTGLLFGPTLGNVPLILLRWAGYPGIGRYDGPHPEFPEDPFHDFIEPYKSMSRRGRYEPLLVHAGTQDDITVGEAKGMVKWVELYRSFNRANTERMETALHGALHEEVPLGVLLTPFILFLMVFNNEGHVNDNPGVVFNPPVKQAYGL
Sbjct:    1 MCGGHPGTVTGLLFGPTLGNVPLILLRWAGYPGIGRYDGPHPEFPEDPFHDFIEPYKSMSRRGRYEPLLVHAGTQDDITVGEAKGMVKWVELYRSFNRANTERMETALHGALHEEVPLGVLLTPFILFLMVFNNEGHVNDNPGVVFNPPVKQAYGL 156          
BLAST of jgi.p|Trimin1|346738 vs. uniprot
Match: A0A835YJK5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJK5_9STRA)

HSP 1 Score: 141 bits (355), Expect = 6.220e-38
Identity = 81/151 (53.64%), Postives = 95/151 (62.91%), Query Frame = 0
Query:   29 AGYPGIGRYDGPH------PEFPEDPFHDFIEPYKSMSRRGRYEPLLVHAGTQDDITVGEAKGMVKWVELYRSFNRANTERMETALHGALHEEVPLGV---------------------LLTPFILFLMVFNNEGHVNDNPGVV-FNPPVK 151
            +GYPGIGRYDGP       P+ P DP   F EPYKSM+RRG YE LLVHAG+  DITV EA+GMVKWV+LY S NR N E +ETA+H ALH+ +PLGV                     LL PFILFLMVF  EG   ++  +V +NP VK
Sbjct:  186 SGYPGIGRYDGPDLNFPSDPDSPTDPKCTFPEPYKSMTRRGGYEQLLVHAGSGADITVKEARGMVKWVKLYSSTNRVNVELVETAVHAALHD-LPLGVRLNRARGTGASSYRVSEEGELLLAPFILFLMVFKGEGLYTEHTDIVAWNPKVK 335          
BLAST of jgi.p|Trimin1|346738 vs. uniprot
Match: A0A836CP61_9STRA (DUF3730 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP61_9STRA)

HSP 1 Score: 132 bits (333), Expect = 6.230e-33
Identity = 78/157 (49.68%), Postives = 93/157 (59.24%), Query Frame = 0
Query:   23 LILLRWAGYPGIGRYDGPHPEFPEDPFHD--FIEPYKSMSRRGRYEPLLVHAGTQDDITVGEAKGMVKWVELYRSFNRANTERMETALHGALHEEVPLGV--------------------LLTPFILFLMVFNNEGHVNDNPG-VVFNPPVKQAYGL 156
            ++  R +GYPGIGRYD P   F  D F D  F EP+KSM+RRG YE LLVHAG+  DIT  +A+GMVKW+ LY SFN  N E  ETA+H ALH  +PLGV                    LL PF+LFLMVF  EG   D    V++NP VK   G+
Sbjct: 1370 MVAGRTSGYPGIGRYDSPIDTF--DTFSDPAFKEPFKSMTRRGGYEQLLVHAGSGKDITTKQAEGMVKWIPLYWSFNSINAELAETAVHSALHH-LPLGVRLNRGRGHGASEYNVVDGELLLAPFVLFLMVFTGEGLYTDPQNKVMWNPLVKHVPGI 1523          
BLAST of jgi.p|Trimin1|346738 vs. uniprot
Match: A0A835YM62_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM62_9STRA)

HSP 1 Score: 122 bits (307), Expect = 2.040e-29
Identity = 73/144 (50.69%), Postives = 86/144 (59.72%), Query Frame = 0
Query:   29 AGYPGIGRYDGPHPEFPEDPFHDFIEPYKSMSRRGRYEPLLVHAGTQDDITVGEAKGMVKWVELYRSFNRANTERMETALHGALHEEVPLGV--------------------LLTPFILFLMVFNNEGHVNDNPG-VVFNPPVK 151
            +GY GIGRYDG   +   +P   F EP++SM+RRG YE LLVHA + DDIT  EAKGMVKW  LY SFN  NTE +ETA+H ALH  +PLGV                    LL PF+LFLMVF  EG   D    V++NP  K
Sbjct: 3094 SGYAGIGRYDGSDIDTFSNP--KFTEPFRSMTRRGGYEQLLVHAVSGDDITTKEAKGMVKWEPLYWSFNGVNTELVETAVHSALHH-LPLGVRLQRQRGAGASSYNEVDGELLLAPFVLFLMVFKGEGLYTDPQNKVMWNPQAK 3234          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|346738 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835YU27_9STRA4.560e-117100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YJK5_9STRA6.220e-3853.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CP61_9STRA6.230e-3349.68DUF3730 domain-containing protein n=1 Tax=Tribonem... [more]
A0A835YM62_9STRA2.040e-2950.69Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_4contigContig_4:1894195..1896353 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|346738mRNA_1757Tribonema minus UTEX_B_3156 mRNAContig_4 1894195..1896490 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|346738|estExt_Genemark1.C_Ctg_40216 ID=Trimin1|346738|estExt_Genemark1.C_Ctg_40216|Name=jgi.p|Trimin1|346738|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=157bp
MCGGHPGTVTGLLFGPTLGNVPLILLRWAGYPGIGRYDGPHPEFPEDPFH
DFIEPYKSMSRRGRYEPLLVHAGTQDDITVGEAKGMVKWVELYRSFNRAN
TERMETALHGALHEEVPLGVLLTPFILFLMVFNNEGHVNDNPGVVFNPPV
KQAYGL*
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