Trimin1|346718|estExt_Genemark1.C_Ctg_40183 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|346718
Unique NameTrimin1|346718|estExt_Genemark1.C_Ctg_40183
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length324
Homology
BLAST of jgi.p|Trimin1|346718 vs. uniprot
Match: A0A836CDR7_9STRA (VKc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDR7_9STRA)

HSP 1 Score: 560 bits (1443), Expect = 3.120e-200
Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0
Query:    1 MAAYGAVAALALVPLLLSSRAAREAGADAQALAMQRAAGVDGWTRSWLLVITTAMATFSAYLMGVLAFRIGAFCPYCFLSLLPLPPLLXXXXXLLLSALPLPPLLLPLTLPPLLPLLQAVLSFGMCAIAWVKGAVPGKTRAAVTGLATVLITAMGALGVFVITEITISDAGAVTTEAMRPPSISTASTPQSVRLAKRLEKLDAAMYGAYWCSHCHHQKELFGAEAFARIKYVECSTKGWQERADVCRAPQGWQAAPPSVPLRSAXXXXXXXXXRTGXXXXXXXXXAKDVPGYPTWEINGELYPGEKSLEELERISGLAPYKQP 323
            MAAYGAVAALALVPLLLSSRAAREAGADAQALAMQRAAGVDGWTRSWLLVITTAMATFSAYLMGVLAFRIGAFCPYCFLSLLPLPPLLXXXXXLLLSALPLPPLLLPLTLPPLLPLLQAVLSFGMCAIAWVKGAVPGKTRAAVTGLATVLITAMGALGVFVITEITISDAGAVTTEAMRPPSISTASTPQSVRLAKRLEKLDAAMYGAYWCSHCHHQKELFGAEAFARIKYVECSTKGWQERADVCRAPQGWQAAPPSVPLRSAXXXXXXXXXRTGXXXXXXXXXAKDVPGYPTWEINGELYPGEKSLEELERISGLAPYKQP
Sbjct:    1 MAAYGAVAALALVPLLLSSRAAREAGADAQALAMQRAAGVDGWTRSWLLVITTAMATFSAYLMGVLAFRIGAFCPYCFLSLLPLPPLLXXXXXLLLSALPLPPLLLPLTLPPLLPLLQAVLSFGMCAIAWVKGAVPGKTRAAVTGLATVLITAMGALGVFVITEITISDAGAVTTEAMRPPSISTASTPQSVRLAKRLEKLDAAMYGAYWCSHCHHQKELFGAEAFARIKYVECSTKGWQERADVCRAPQGWQAAPPSVPLRSAXXXXXXXXXRTGXXXXXXXXXAKDVPGYPTWEINGELYPGEKSLEELERISGLAPYKQP 323          
BLAST of jgi.p|Trimin1|346718 vs. uniprot
Match: A0A6H5K243_9PHAE (VKc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K243_9PHAE)

HSP 1 Score: 202 bits (513), Expect = 3.000e-58
Identity = 118/296 (39.86%), Postives = 155/296 (52.36%), Query Frame = 0
Query:   33 AMQRAAGVDGWTRSWLLVITTAMATFSAYLMGVLAFRIGAFCPYCFLSLLPLPPLLXXXXXLLLSALPLPPLLLPLTLPPLLPLLQAVLSFGMCAIAWVKGAVPGKTRAAVTGLATVLITAMGALGVFVITEITI-------SDAGAVTTEAMRPPSISTASTPQSVRLAKRLEKLDAAMYGAYWCSHCHHQKELFGAEAFARIKYVECSTKGWQERADVCRAPQGWQAAPPSVPLRSAXXXXXXXXXRTGXXXXXXXXXAKDVPGYPTWEINGELYPGEKSLEELERISGLAPYK 321
            A + +A VD  TRS LLV+TTAM  FS YL+ +L F+IG  CP+C  S                                      A LS  MC +AW K AVP KT+AAV G  T LITA   L VFV+TE  +       S    V  + + PP I T S+PQ++R+ K+L+ LDA MYGAYWC+HC +QKE+ G EA +++KY+ECS +G   + D+C+A                                       D+PG+PTW+I+G+LYPGE++LEELE I GLAPYK
Sbjct:  189 AKEESASVDKTTRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTS--------------------------------------AGLSLSMCIVAWTKRAVPEKTKAAVVGACTTLITAFACLAVFVVTETALDIRQAEASPGELVGVQLVAPPLIDTESSPQALRIGKKLKSLDAKMYGAYWCTHCFNQKEMLGKEAMSKVKYIECSNRGVDNQVDMCKA--------------------------------------ADIPGFPTWDIDGKLYPGEQTLEELEEIVGLAPYK 408          
BLAST of jgi.p|Trimin1|346718 vs. uniprot
Match: D7G9E2_ECTSI (Possible vitamin K epoxide reductase, plastid protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E2_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 1.730e-57
Identity = 115/295 (38.98%), Postives = 154/295 (52.20%), Query Frame = 0
Query:   33 AMQRAAGVDGWTRSWLLVITTAMATFSAYLMGVLAFRIGAFCPYCFLSLLPLPPLLXXXXXLLLSALPLPPLLLPLTLPPLLPLLQAVLSFGMCAIAWVKGAVPGKTRAAVTGLATVLITAMGALGVFVITEITI-------SDAGAVTTEAMRPPSISTASTPQSVRLAKRLEKLDAAMYGAYWCSHCHHQKELFGAEAFARIKYVECSTKGWQERADVCRAPQGWQAAPPSVPLRSAXXXXXXXXXRTGXXXXXXXXXAKDVPGYPTWEINGELYPGEKSLEELERISGLAPY 320
            A + +A VD  TRS LLV+TTAM  FS YL+ +L F+IG  CP+C  S                                      A LS  MC +AW+K AVP KT+AAV G  T LITA   L VFV+TE  +       S    V  + + PP I T S+PQ++R+ K+L+ LDA MYGAYWC+HC +QKE+ G +  +++KY+ECS +G   + D+C+A                                       D+PG+PTW+I+G+LYPGE++LEELE I GLAPY
Sbjct:  100 AKEESASVDKTTRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTS--------------------------------------AGLSLSMCVVAWMKRAVPEKTKAAVVGACTTLITAFACLTVFVVTETALDIRQAEASPGELVGVQLVAPPLIDTESSPQALRIGKKLKSLDAKMYGAYWCTHCFNQKEMLGKQVMSKVKYIECSNRGVDNQVDMCKA--------------------------------------ADIPGFPTWDIDGKLYPGEQTLEELEEIVGLAPY 318          
BLAST of jgi.p|Trimin1|346718 vs. uniprot
Match: A0A4D9D107_9STRA (VKc domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D107_9STRA)

HSP 1 Score: 163 bits (413), Expect = 5.600e-45
Identity = 118/329 (35.87%), Postives = 148/329 (44.98%), Query Frame = 0
Query:    3 AYGAVAALALVPLLLSSRAAREAGADAQALAMQRAAGVDGWTRSWLLVITTAMATFSAYLMGVLAFRIGAFCPYCFLSLLPLPPLLXXXXXLLLSALPLPPLLLPLTLPPLLPLLQAVLSFGMCAIAWVKGAVPGKTRAAVTGLATVLITAMGALGVFVITEITI-------SDAGAVTTEAMRPPSISTASTPQSVRLAKRLEKLDAAMYGAYWCSHCHHQKELFGAEAFARIKYVECSTKGWQERADVCRAPQGWQAAPPSVPLRSAXXXXXXXXXRTGXXXXXXXXXAKDVPGYPTWEINGELYPGEKSLEELERI-SGLAPYKQP 323
            AYG VAALAL P+L     +RE             A  D  +R+ LL +TT MATFSAYLM VLA ++   CPYC  S                                      A LSF M A+ WVK   P  T++ V     V +T + +LG F      I        + G V     RPP I+T ST +S  LA RL+ LDA MYGA+WCSHC+ QK+  G EA+ RI Y+EC+  G+   +  C+A                                      + +PGYPTWEI GELYPGEKSL++LE I  G  P   P
Sbjct:   26 AYGTVAALALWPILAGKEGSRER------------AEADLNSRAPLLTVTTGMATFSAYLMWVLATQVRELCPYCLAS--------------------------------------ASLSFSMAALTWVKQVEPNATKSLVYKAGAVAVTGLFSLGAFAYASARIMVMSQGPGEGGEV--GGSRPPPITTHSTARSEALALRLQGLDARMYGAFWCSHCYEQKQSLGQEAYRRIAYIECAPDGFASESKTCKA--------------------------------------RKIPGYPTWEIKGELYPGEKSLDQLEDIVDGKVPVPPP 264          
BLAST of jgi.p|Trimin1|346718 vs. uniprot
Match: W7TFV8_9STRA (Vitamin K epoxide reductase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFV8_9STRA)

HSP 1 Score: 164 bits (416), Expect = 5.720e-44
Identity = 117/329 (35.56%), Postives = 150/329 (45.59%), Query Frame = 0
Query:    3 AYGAVAALALVPLLLSSRAAREAGADAQALAMQRAAGVDGWTRSWLLVITTAMATFSAYLMGVLAFRIGAFCPYCFLSLLPLPPLLXXXXXLLLSALPLPPLLLPLTLPPLLPLLQAVLSFGMCAIAWVKGAVPGKTRAAVTGLATVLITAMGALGVFVITEITI-------SDAGAVTTEAMRPPSISTASTPQSVRLAKRLEKLDAAMYGAYWCSHCHHQKELFGAEAFARIKYVECSTKGWQERADVCRAPQGWQAAPPSVPLRSAXXXXXXXXXRTGXXXXXXXXXAKDVPGYPTWEINGELYPGEKSLEELERI-SGLAPYKQP 323
            AYG V ALAL P+L  +  +RE             A  D  +R+ LL +TT MATFSAYLM VLA ++   CPYC  S                                      A LSF M A+ WVK   P  T++ V     V++T + +LG F      I        + G V     RPP I+T ST +S  LA RL+ LDA MYGA+WCSHC+ QK+  G EA+ RI Y+EC+  G+   + +C+A                                      + +PGYPTWEI GELYPGEKSL++LE I  G  P   P
Sbjct:  163 AYGTVTALALWPILAGNEGSRER------------AEADLNSRAPLLTVTTGMATFSAYLMWVLATQVRELCPYCLAS--------------------------------------ASLSFSMAALTWVKQVEPNATKSLVYKAGAVVVTGLFSLGAFAYASARIMVMSQGPGEGGEV--GGSRPPPITTHSTARSEALALRLQDLDARMYGAFWCSHCYEQKQSLGQEAYRRIAYIECAPDGFASESKICKA--------------------------------------RKIPGYPTWEIKGELYPGEKSLDQLEDIVDGKVPVPPP 401          
BLAST of jgi.p|Trimin1|346718 vs. uniprot
Match: A0A0G4EVC6_VITBC (VKc domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EVC6_VITBC)

HSP 1 Score: 157 bits (397), Expect = 9.750e-41
Identity = 117/349 (33.52%), Postives = 154/349 (44.13%), Query Frame = 0
Query:    1 MAAYGAVAALALVPLLLSSRAAREAGADAQALAMQRAAGVDGWTRSWLLVITTAMATFSAYLMGVLAFRIGAFCPYCFLSLLPLPPLLXXXXXLLLSALPLPPLLLPLTLPPLLPLLQAVLSFGMCAIAWVKGAVPGKTRAAVTGLATVLITAMGALGVFVITEI-------------TISDAGAVTTEAMR----------------PPSISTASTPQSVRLAKRLEKLDAAMYGAYWCSHCHHQKELFGAEAF-ARIKYVECSTKGWQERADVCRAPQGWQAAPPSVPLRSAXXXXXXXXXRTGXXXXXXXXXAKDVPGYPTWEINGELYPGEKSLEELERISGLAP 319
            M AYG V  L+L+PL   S                     + WTR  LL +TTAMATFS YLM VL F++  FCPYC+LS                                      A LS  +  ++W+   VP   ++ +   AT ++ A+ +LGV+ + E                S AG+   E                   PP I+TAS+ +S+RLAK+L+ + A MYGAYWC HC+ QK+ FG EAF   I+YVEC+ +G     D C                                        +DVPGYPTWEINGELYPGEKSL  LE+I+G+AP
Sbjct:  149 MLAYGLVTYLSLLPLSKPS--------------------AEQWTRPMLLALTTAMATFSVYLMSVLVFQLQEFCPYCYLS--------------------------------------AGLSLTLFLMSWLWSIVPDGLQSRIIRYATAVVMAVMSLGVYSVQEPGNLAAVVAFVRNPVASLAGSEGEEGYEAGWFLDRLFESEGPFVPPEITTASSARSLRLAKKLQTMGARMYGAYWCPHCYDQKQTFGKEAFEGYIEYVECAREGLNSERDRC--------------------------------------DKRDVPGYPTWEINGELYPGEKSLATLEKIAGIAP 401          
BLAST of jgi.p|Trimin1|346718 vs. uniprot
Match: A0A7S4NFW6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NFW6_9STRA)

HSP 1 Score: 133 bits (335), Expect = 3.130e-32
Identity = 109/334 (32.63%), Postives = 146/334 (43.71%), Query Frame = 0
Query:    2 AAYGAVAALALVPLLLSSRAAREAGADAQALAMQRAAG---VDGWTRSWLLVITTAMATFSAYLMGVLAFRIGAFCPYCFLSLLPLPPLLXXXXXLLLSALPLPPLLLPLTLPPLLPLLQAVLSFGMCAIAWVKGAVPGKT--RAAVTGLATVLITAMGALGVFVITE---ITISD------------AGAVTTEAMR---PPSISTASTPQSVRLAKRLEKLDAAMYGAYWCSHCHHQKELFGAEAFARIKYVECSTKGWQERADVCRAPQGWQAAPPSVPLRSAXXXXXXXXXRTGXXXXXXXXXAKDVPGYPTWEINGELYPGEKSLEELE 312
            AAY +V ALA+ PLL  S      G D  A+      G   +D   R  L  +TT MATFS+YLMG+L   I A CP+CF+S                                      A LSF +  I W  G VP       A  GL   L +    L +F+  E   +  +D            A A T +  +   PP ++T S+ ++++LA  LE LDA M+GAYWCSHC+ QK+  G EA  R+ YVECS +G   + D+C+                                       ++VPGYPTWE+ G+LYPGE  L+ELE
Sbjct:  134 AAYASVFALAVWPLLFGSG---RKGGDFVAVDDDXXEGEEEMDVTNRLALAALTTVMATFSSYLMGLLFGVIHASCPFCFVS--------------------------------------AALSFALGGITWFGGVVPSNKAKEGARIGLGGFLASTAAILALFLSVEGNGVGTNDILAANGFTASVVANAATRQEQKDLPPPPVTTHSSERALKLALDLESLDARMFGAYWCSHCYEQKQKLGYEAMGRLPYVECSKEGLNSKRDLCQE--------------------------------------REVPGYPTWEVGGKLYPGEMELDELE 388          
BLAST of jgi.p|Trimin1|346718 vs. uniprot
Match: A0A1X6NJ04_PORUM (VKc domain-containing protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJ04_PORUM)

HSP 1 Score: 127 bits (319), Expect = 9.370e-31
Identity = 90/274 (32.85%), Postives = 122/274 (44.53%), Query Frame = 0
Query:   41 DGWTRSWLLVITTAMATFSAYLMGVLAFRIGAFCPYCFLSLLPLPPLLXXXXXLLLSALPLPPLLLPLTLPPLLPLLQAVLSFGMCAIAWVKGAVPGKTRAAVTGLATVLITAMGALGVFVITEITISDAGAVTTEAMRPPSISTASTPQSVRLAKRLEKLDAAMYGAYWCSHCHHQKELFGAEAFARIKYVECSTKGWQERADVCRAPQGWQAAPPSVPLRSAXXXXXXXXXRTGXXXXXXXXXAKDVPGYPTWEINGELYPGEKSLEELERI 314
            D  TR  +++++ AMA FSAYL+ +LA  I + C YC                                          + S G+CA  ++  A+ G  RA     AT  +   GA+    ++ +              PP I+T S   ++RLAKRLE+  A M+GAYWCSHC+ QK+LFG EAFARI+YVEC+  G Q ++ +CR                                       K VPGYPTWEING LYPGE  L +L+ I
Sbjct:   97 DAATRPLMVLLSAAMAAFSAYLLTLLAVVIRSPCAYC------------------------------------------LTSAGVCAALFLGTALIG--RAVPDAGATARLGGAGAVAAAALSGVMFLSTPVQARPPSAPPPITTVSERGAMRLAKRLEEQGATMFGAYWCSHCYAQKQLFGEEAFARIRYVECAKDGAQSQSSLCRE--------------------------------------KKVPGYPTWEINGALYPGEMDLADLQNI 288          
BLAST of jgi.p|Trimin1|346718 vs. uniprot
Match: M2X8Y0_GALSU (VKc domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X8Y0_GALSU)

HSP 1 Score: 128 bits (322), Expect = 1.390e-30
Identity = 92/277 (33.21%), Postives = 131/277 (47.29%), Query Frame = 0
Query:   43 WTRSWLLVITTAMATFSAYLMGVLAFRIGAFCPYCFLSLLPLPPLLXXXXXLLLSALPLPPLLLPLTLPPLLPLLQAVLSFGMCAIAWVK----GAVPGKTRAAVTGLATVLITAMGALGVFVITEITISDAGAVTTEAMRPPSISTASTPQSVRLAKRLEKLDAAMYGAYWCSHCHHQKELFGAEAFARIKYVECSTKGWQERADVCRAPQGWQAAPPSVPLRSAXXXXXXXXXRTGXXXXXXXXXAKDVPGYPTWEINGELYPGEKSLEELERIS 315
            +++  L ++T AM   SA+LM +L F+I +FCPYC LS                             L   L +  + L F   ++ W K      V     A++TG         GAL  F    +T S+      +   PPSI++ S  + ++LA+RL+   A MYGA+WC HC+HQK++FG EAF +I+YVECS  G   + ++CR                                       KDVPGYPTWEI+GELYPGE+S+EELE ++
Sbjct:  182 FSKKALSLLTLAMTIVSAFLMYILFFQIQSFCPYCVLSAF---------------------------LSGSLFITSSFLHFS--SVGWKKWIRHSFVVLLILASITG---------GALVAFGTASMTFSN------QVFDPPSITSHSNARMMKLAERLKSKKARMYGAFWCEHCYHQKQMFGQEAFEKIEYVECSKNGRDSQYNLCRE--------------------------------------KDVPGYPTWEIDGELYPGEQSVEELEELA 376          
BLAST of jgi.p|Trimin1|346718 vs. uniprot
Match: A0A6U4IN87_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4IN87_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.140e-28
Identity = 108/357 (30.25%), Postives = 143/357 (40.06%), Query Frame = 0
Query:    3 AYGAVAALALVPLLLSSRAAREAGADAQALAMQRAAGVDGWTRSWLLVITTAMATFSAYLMGVLAFRIGAFCPYCFLSLLPLPPLLXXXXXLLLSALPLPPLLLPLTLPPLLPLLQAVLSFGMCAIAWVKGAVP-------GKTRAAVTGLATVLI-----------------------TAMGALGVFVITEITISDAGAVTTEAM------------RPPSISTASTPQSVRLAKRLEKLDAAMYGAYWCSHCHHQKELFGAEAFARIKYVECSTKGWQERADVCRAPQGWQAAPPSVPLRSAXXXXXXXXXRTGXXXXXXXXXAKDVPGYPTWEINGELYPGEKSLEELERISGL 317
            AY ++ ALAL PL++    A E G             ++G T+  L V++T+MATFS YLMGVL F IG+ CPYC LS                                      A  SF + A++W    +P       G   AA T  ATV +                        A GA       E+  SD  A   E +            R P + T S  + +++A +L +  A  YGAYWC HC+ QK   GAEA   ++Y EC+  G   +A +CR                                       K VPGYPTWEI+GEL+PGEKSL ELE + G+
Sbjct:   66 AYLSIIALALAPLVVP---APEEGDHP----------LEGVTKVGLFVVSTSMATFSTYLMGVLGFVIGSPCPYCILS--------------------------------------AFCSFTLAALSWRGSLLPLQRALKAGAAAAAFTFAATVPMYMTARAETVNLAANPASAYKMGDAARGARQQLAAEEV--SDDAAAALELLENAEIDAALKEKRAPKVLTTSGKREMKIAGKLREKGAKFYGAYWCGHCYEQKRRLGAEAMKSVQYFECAKDGQNSQAKICRE--------------------------------------KGVPGYPTWEIDGELHPGEKSLAELEELLGM 331          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|346718 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CDR7_9STRA3.120e-200100.00VKc domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6H5K243_9PHAE3.000e-5839.86VKc domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G9E2_ECTSI1.730e-5738.98Possible vitamin K epoxide reductase, plastid prot... [more]
A0A4D9D107_9STRA5.600e-4535.87VKc domain-containing protein n=1 Tax=Nannochlorop... [more]
W7TFV8_9STRA5.720e-4435.56Vitamin K epoxide reductase n=1 Tax=Nannochloropsi... [more]
A0A0G4EVC6_VITBC9.750e-4133.52VKc domain-containing protein n=2 Tax=Vitrella bra... [more]
A0A7S4NFW6_9STRA3.130e-3232.63Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A1X6NJ04_PORUM9.370e-3132.85VKc domain-containing protein (Fragment) n=1 Tax=P... [more]
M2X8Y0_GALSU1.390e-3033.21VKc domain-containing protein n=1 Tax=Galdieria su... [more]
A0A6U4IN87_9STRA1.140e-2830.25Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038354VKOR domain superfamilyGENE3D1.20.1440.130VKOR domaincoord: 1..102
e-value: 4.4E-11
score: 44.2
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 188..322
e-value: 1.9E-24
score: 87.4
NoneNo IPR availablePANTHERPTHR34573FAMILY NOT NAMEDcoord: 281..319
coord: 1..247
IPR012932Vitamin K epoxide reductasePFAMPF07884VKORcoord: 1..82
e-value: 2.0E-10
score: 40.9
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 198..312

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_4contigContig_4:1575903..1580562 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|346718mRNA_1719Tribonema minus UTEX_B_3156 mRNAContig_4 1575903..1580847 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|346718|estExt_Genemark1.C_Ctg_40183 ID=Trimin1|346718|estExt_Genemark1.C_Ctg_40183|Name=jgi.p|Trimin1|346718|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=324bp
MAAYGAVAALALVPLLLSSRAAREAGADAQALAMQRAAGVDGWTRSWLLV
ITTAMATFSAYLMGVLAFRIGAFCPYCFLSLLPLPPLLLLLLLLLLSALP
LPPLLLPLTLPPLLPLLQAVLSFGMCAIAWVKGAVPGKTRAAVTGLATVL
ITAMGALGVFVITEITISDAGAVTTEAMRPPSISTASTPQSVRLAKRLEK
LDAAMYGAYWCSHCHHQKELFGAEAFARIKYVECSTKGWQERADVCRAPQ
GWQAAPPSVPLRSAGWQERADLCRTGWQERADLCRAKDVPGYPTWEINGE
LYPGEKSLEELERISGLAPYKQP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038354VKOR_sf
IPR012932VKOR
IPR036249Thioredoxin-like_sf