Trimin1|346712|estExt_Genemark1.C_Ctg_40171 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|346712
Unique NameTrimin1|346712|estExt_Genemark1.C_Ctg_40171
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length627
Homology
BLAST of jgi.p|Trimin1|346712 vs. uniprot
Match: A0A836CD72_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD72_9STRA)

HSP 1 Score: 798 bits (2061), Expect = 2.490e-284
Identity = 626/626 (100.00%), Postives = 626/626 (100.00%), Query Frame = 0
Query:    1 MVDMQRDEREINLSIPASAQQSAVTGRSAMSSGPAVQLLPGVYNPVSHHQPAAMQHXXXXXXXXXXXXXQXXQAAQPSHHYQWQGQRTPVATAATPPAGARYAFVAPPPAHTTSPSGSAIDHDAGAGNSGMYVLPEQGGWVEQYPEGWYTTATGGAEWAAAAAAAGWGTARLPYGGAWGYAPAPAPPAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYSPAPAYARTAGLAAAAXAATAMPANTYSSHVDPTNMRYTKLSIYAAFSDGGLLQDAADRLANGSLSPADFPQMRVVQHRGVYFSLDNRRLWAFKTAKITSVPVLVMPLFRKLRLRLETQQYKDSVELRWPNSLVAAGAAGPLETAPNTPLSHGKGLLQAEXXXXXXXXXXXXXMPAGSGPLTTDSDATTVVTNAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPDDGEELVGEMRGLTLQGVSELTRTPHKYGTGIGKHDVVPLPPRPTFGAAPVSSIAKSRDNSPTAAANAAKAPAFVGTASSGSGGDASR 626
            MVDMQRDEREINLSIPASAQQSAVTGRSAMSSGPAVQLLPGVYNPVSHHQPAAMQHXXXXXXXXXXXXXQXXQAAQPSHHYQWQGQRTPVATAATPPAGARYAFVAPPPAHTTSPSGSAIDHDAGAGNSGMYVLPEQGGWVEQYPEGWYTTATGGAEWAAAAAAAGWGTARLPYGGAWGYAPAPAPPAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYSPAPAYARTAGLAAAAXAATAMPANTYSSHVDPTNMRYTKLSIYAAFSDGGLLQDAADRLANGSLSPADFPQMRVVQHRGVYFSLDNRRLWAFKTAKITSVPVLVMPLFRKLRLRLETQQYKDSVELRWPNSLVAAGAAGPLETAPNTPLSHGKGLLQAEXXXXXXXXXXXXXMPAGSGPLTTDSDATTVVTNAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPDDGEELVGEMRGLTLQGVSELTRTPHKYGTGIGKHDVVPLPPRPTFGAAPVSSIAKSRDNSPTAAANAAKAPAFVGTASSGSGGDASR
Sbjct:    1 MVDMQRDEREINLSIPASAQQSAVTGRSAMSSGPAVQLLPGVYNPVSHHQPAAMQHXXXXXXXXXXXXXQXXQAAQPSHHYQWQGQRTPVATAATPPAGARYAFVAPPPAHTTSPSGSAIDHDAGAGNSGMYVLPEQGGWVEQYPEGWYTTATGGAEWAAAAAAAGWGTARLPYGGAWGYAPAPAPPAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYSPAPAYARTAGLAAAAXAATAMPANTYSSHVDPTNMRYTKLSIYAAFSDGGLLQDAADRLANGSLSPADFPQMRVVQHRGVYFSLDNRRLWAFKTAKITSVPVLVMPLFRKLRLRLETQQYKDSVELRWPNSLVAAGAAGPLETAPNTPLSHGKGLLQAEXXXXXXXXXXXXXMPAGSGPLTTDSDATTVVTNAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPDDGEELVGEMRGLTLQGVSELTRTPHKYGTGIGKHDVVPLPPRPTFGAAPVSSIAKSRDNSPTAAANAAKAPAFVGTASSGSGGDASR 626          
BLAST of jgi.p|Trimin1|346712 vs. uniprot
Match: UPI001FD90DEC (LysM peptidoglycan-binding domain-containing protein n=1 Tax=Asticcacaulis solisilvae TaxID=1217274 RepID=UPI001FD90DEC)

HSP 1 Score: 74.3 bits (181), Expect = 5.280e-10
Identity = 33/78 (42.31%), Postives = 55/78 (70.51%), Query Frame = 0
Query:  282 VDPTNMRYTKLSIYAAFSDGGLLQDAADRLANGSLSPADFPQMRVVQHRGVYFSLDNRRLWAFKTAKITSVPVLVMPL 359
            ++P ++R+T+ ++   FSDGG + DA  +L NG++S  DFP +R+V+H G  +SLDNRRL AF  A++ ++PV  + +
Sbjct: 1274 MNPRDIRFTQDTVSPNFSDGGTINDAVAQLRNGAVSADDFPAIRLVEHDGKLWSLDNRRLVAFNAAQLDNIPVKTLDM 1351          
BLAST of jgi.p|Trimin1|346712 vs. uniprot
Match: A0A2R5GKD9_9STRA (Replication factor C subunit 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GKD9_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 8.600e-10
Identity = 35/89 (39.33%), Postives = 56/89 (62.92%), Query Frame = 0
Query:  282 VDPTNMRYTKLSIYAAFSDGGLLQDAADRLANGSLSPADFPQMRVVQHRGVYFSLDNRRLWAFKTAKITSVPVLVMP--LFRKLRLRLE 368
            + P  + Y+   I   F DG L+++  D L    +SP D P + V++H+G+ ++LDNRRLWAFK A ++S+PV++    L  KLR +L+
Sbjct:  207 LSPEAIYYSVSEISGFFDDGRLVEETVDDLLEEIISPFDIPAITVIEHKGLMYTLDNRRLWAFKEADVSSIPVILQDSRLSYKLRRQLD 295          
BLAST of jgi.p|Trimin1|346712 vs. uniprot
Match: A0A433PUD8_9FUNG (Uncharacterized protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PUD8_9FUNG)

HSP 1 Score: 68.6 bits (166), Expect = 6.640e-9
Identity = 32/71 (45.07%), Postives = 46/71 (64.79%), Query Frame = 0
Query:  282 VDPTNMRYTKLSIYAAFSDGGLLQDAADRLANGSLSPADFPQMRVVQHRGVYFSLDNRRLWAFKTAKITSV 352
            ++P N+RYT+ SI   F +G  L   A ++ +G L+  D P +RV  H GV+++LDNRRLW  K A IT+V
Sbjct:  189 INPQNVRYTQDSIAPTFRNGNSLMQTALKIRHGLLNSNDLPSIRVRAHNGVWYALDNRRLWVLKEAGITNV 259          
BLAST of jgi.p|Trimin1|346712 vs. uniprot
Match: A0A2R6WW31_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WW31_MARPO)

HSP 1 Score: 66.6 bits (161), Expect = 1.710e-8
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 0
Query:  282 VDPTNMRYTKLSIYAAFS---DGGLLQDAADRLANGSLSPADFPQMRVVQHRGVYFSLDNRRLWAFKTAKITSVPVLVMPLFRKLRL 365
            VDP  + +T+ SI   F    +   + DA   + NG++  ++F +MRVV H G  +SLDNRRLW FK AK+  + V V+P  R  R+
Sbjct:    8 VDPDTLLFTQDSIAVRFKKPYEKEKIDDAVISILNGAVRVSEFKRMRVVDHEGRLWSLDNRRLWVFKKAKVRKIVVDVVPFHRNPRI 94          
BLAST of jgi.p|Trimin1|346712 vs. uniprot
Match: A0A484QN72_9ZZZZ (Hemagglutinin-like secreted protein n=2 Tax=plant metagenome TaxID=1297885 RepID=A0A484QN72_9ZZZZ)

HSP 1 Score: 67.4 bits (163), Expect = 4.960e-8
Identity = 36/78 (46.15%), Postives = 49/78 (62.82%), Query Frame = 0
Query:  281 HVDPTNMRYTKLSIYAAFSDGGLLQDAADRLANGSLSPADFPQMRVVQHRGVYFSLDNRRLWAFKTAKITSVPVLVMP 358
            + DP+ +R+T+ SI   F +   LQ   DRL NGS+SP DFP +RV +  G+ +SLDNRRL A   A    VPV ++P
Sbjct:  480 YADPSQIRFTQDSIANKFKNDQGLQGVVDRLKNGSISPEDFPPIRVFKKDGLVYSLDNRRLLAASQA---GVPVKIVP 554          
BLAST of jgi.p|Trimin1|346712 vs. uniprot
Match: A0A484SE57_9ZZZZ (Large exoprotein involved in heme utilization or adhesion of ShlA/HecA/FhaA family n=1 Tax=plant metagenome TaxID=1297885 RepID=A0A484SE57_9ZZZZ)

HSP 1 Score: 67.4 bits (163), Expect = 6.170e-8
Identity = 36/78 (46.15%), Postives = 49/78 (62.82%), Query Frame = 0
Query:  281 HVDPTNMRYTKLSIYAAFSDGGLLQDAADRLANGSLSPADFPQMRVVQHRGVYFSLDNRRLWAFKTAKITSVPVLVMP 358
            + DP+ +R+T+ SI   F +   LQ   DRL NGS+SP DFP +RV +  G+ +SLDNRRL A   A    VPV ++P
Sbjct:  721 YADPSQIRFTQDSIANKFKNDQGLQGVVDRLKNGSISPEDFPPIRVFKKDGLVYSLDNRRLLAASQA---GVPVKIVP 795          
BLAST of jgi.p|Trimin1|346712 vs. uniprot
Match: A0A165UK57_9HYPH (DUF637 domain-containing protein n=1 Tax=Pseudovibrio sp. Ad26 TaxID=989410 RepID=A0A165UK57_9HYPH)

HSP 1 Score: 66.2 bits (160), Expect = 1.370e-7
Identity = 35/100 (35.00%), Postives = 56/100 (56.00%), Query Frame = 0
Query:  282 VDPTNMRYTKLSIYAAFSDGGLLQDAADRLANGSLSPADFPQMRVVQHRGVYFSLDNRRLWAFKTA--KITSVPVLVMPLFRKLRLRLETQQYKDSVELR 379
            ++P+++R+T+ SI A FSDG  + D    L NGS+ P+  P +R  +  G  FSLDNRRL+A++ A   + +VP     + R  R +  T      + +R
Sbjct:  675 LNPSSVRFTQNSIGAKFSDGRSVDDLIIGLRNGSVDPSSLPPIRTFEANGQLFSLDNRRLYAYRQAGVDVPTVPATAAEIARDARFKFSTINGGQDIAVR 774          
BLAST of jgi.p|Trimin1|346712 vs. uniprot
Match: UPI00178192D2 (RHS repeat-associated core domain-containing protein n=1 Tax=Ensifer sp. ENS05 TaxID=2769277 RepID=UPI00178192D2)

HSP 1 Score: 63.9 bits (154), Expect = 3.430e-7
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 0
Query:  265 AAAXAATAMPANTYSSHVDPTNMRYTKLSIYAAFSDGGLLQDAADRLANGSLSPADFPQMRVVQHRGVYFSLDNRRLWAFKTA 347
            AAA +  A  A     +VDP+ +R+++ SI A F +GG + D    L  G++ P D P +R+V+  GV +SLDNRR+ AF+ A
Sbjct:  250 AAASSKAAKAARMAEFYVDPSAVRFSQDSIKATFKEGGSIDDLVQSLKAGTVQPKDIPAVRLVEKDGVLYSLDNRRVEAFRRA 332          
BLAST of jgi.p|Trimin1|346712 vs. uniprot
Match: UPI00112602C9 (DUF637 domain-containing protein n=1 Tax=Cupriavidus pinatubonensis TaxID=248026 RepID=UPI00112602C9)

HSP 1 Score: 64.7 bits (156), Expect = 3.540e-7
Identity = 32/72 (44.44%), Postives = 47/72 (65.28%), Query Frame = 0
Query:  276 NTYSSHVDPTNMRYTKLSIYAAFSDGGLLQDAADRLANGSLSPADFPQMRVVQHRGVYFSLDNRRLWAFKTA 347
            +T S   DP ++R+T+ SI + FS+G  LQDA   L +GSLSP   P +RV +  G++++LDNRRL+    A
Sbjct:  493 STLSGLADPNSIRFTQSSIGSTFSNGTSLQDAIGALQSGSLSPTSLPPIRVFEKDGLFYTLDNRRLFVTSQA 564          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|346712 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A836CD72_9STRA2.490e-284100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI001FD90DEC5.280e-1042.31LysM peptidoglycan-binding domain-containing prote... [more]
A0A2R5GKD9_9STRA8.600e-1039.33Replication factor C subunit 2 n=1 Tax=Hondaea fer... [more]
A0A433PUD8_9FUNG6.640e-945.07Uncharacterized protein n=1 Tax=Endogone sp. FLAS-... [more]
A0A2R6WW31_MARPO1.710e-840.23Uncharacterized protein n=1 Tax=Marchantia polymor... [more]
A0A484QN72_9ZZZZ4.960e-846.15Hemagglutinin-like secreted protein n=2 Tax=plant ... [more]
A0A484SE57_9ZZZZ6.170e-846.15Large exoprotein involved in heme utilization or a... [more]
A0A165UK57_9HYPH1.370e-735.00DUF637 domain-containing protein n=1 Tax=Pseudovib... [more]
UPI00178192D23.430e-740.96RHS repeat-associated core domain-containing prote... [more]
UPI00112602C93.540e-744.44DUF637 domain-containing protein n=1 Tax=Cupriavid... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 446..479
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 525..546
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 514..626

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_4contigContig_4:1455039..1460732 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|346712mRNA_1704Tribonema minus UTEX_B_3156 mRNAContig_4 1454625..1460754 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|346712|estExt_Genemark1.C_Ctg_40171 ID=Trimin1|346712|estExt_Genemark1.C_Ctg_40171|Name=jgi.p|Trimin1|346712|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=627bp
MVDMQRDEREINLSIPASAQQSAVTGRSAMSSGPAVQLLPGVYNPVSHHQ
PAAMQHQHYHHHHQHAPAPQHQQAAQPSHHYQWQGQRTPVATAATPPAGA
RYAFVAPPPAHTTSPSGSAIDHDAGAGNSGMYVLPEQGGWVEQYPEGWYT
TATGGAEWAAAAAAAGWGTARLPYGGAWGYAPAPAPPAHHHHHPAAAAAA
AYYAVPPHLLHHAAAAAPLLPRSSAPMRGGMAARGSLSGGGSSGGAAAAV
YSPAPAYARTAGLAAAAAAATAMPANTYSSHVDPTNMRYTKLSIYAAFSD
GGLLQDAADRLANGSLSPADFPQMRVVQHRGVYFSLDNRRLWAFKTAKIT
SVPVLVMPLFRKLRLRLETQQYKDSVELRWPNSLVAAGAAGPLETAPNTP
LSHGKGLLQAEGLLQAEGLLQAEGMPAGSGPLTTDSDATTVVTNAVTTSA
EDRRRHLLSDSATVVEHMSPPVSPSPRAAGSSGGAAAALAAAVATASAGA
AALDGGSSVGSGGAGAGAGGALSSDDEEDGMRTPPSSPDDGEELVGEMRG
LTLQGVSELTRTPHKYGTGIGKHDVVPLPPRPTFGAAPVSSIAKSRDNSP
TAAANAAKAPAFVGTASSGSGGDASR*
back to top