Trimin1|346700|estExt_Genemark1.C_Ctg_40135 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|346700
Unique NameTrimin1|346700|estExt_Genemark1.C_Ctg_40135
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length446
Homology
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BLAST of jgi.p|Trimin1|346700 vs. uniprot
Match: A0A835YWF3_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWF3_9STRA)

HSP 1 Score: 646 bits (1667), Expect = 2.630e-230
Identity = 445/445 (100.00%), Postives = 445/445 (100.00%), Query Frame = 0 
Query:    1 MNSCTTDASGGGGWSALHHACDSGVDDPELIQTLLSLGVDMDARDYAGRTPLAIASRAGHVKAARAXXXXXXXXXXXXXXXXXXXXXXXXXXXRSVIAALARHGXXXXXXXXXXXAVAAVDVQREXXXXXXXXXXXXXXXXXLVRCGADARHENCWGEQGGTLAKGYKARGGREILEQLPPDLILAISDNQPLVIEVLDGGCGDASCSSSSGSDDIDQLRRWQCTSAGVEFLAIPTFRSINYLARAGGIDVSIAEGGTVYTTDMLVVSSKATECIRMLLPMALSPDSPIRCLEGPVLTIFSTNSGTWLMQEGLFMRMASASKLLENRRHNDSCTVPWREECTSTSAASGASSPLSCHSLRGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTARRARWLPGWLLRWAAPGVLAPSGGKEAIDCV 445
            MNSCTTDASGGGGWSALHHACDSGVDDPELIQTLLSLGVDMDARDYAGRTPLAIASRAGHVKAARAXXXXXXXXXXXXXXXXXXXXXXXXXXXRSVIAALARHGXXXXXXXXXXXAVAAVDVQREXXXXXXXXXXXXXXXXXLVRCGADARHENCWGEQGGTLAKGYKARGGREILEQLPPDLILAISDNQPLVIEVLDGGCGDASCSSSSGSDDIDQLRRWQCTSAGVEFLAIPTFRSINYLARAGGIDVSIAEGGTVYTTDMLVVSSKATECIRMLLPMALSPDSPIRCLEGPVLTIFSTNSGTWLMQEGLFMRMASASKLLENRRHNDSCTVPWREECTSTSAASGASSPLSCHSLRGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTARRARWLPGWLLRWAAPGVLAPSGGKEAIDCV
Sbjct:    1 MNSCTTDASGGGGWSALHHACDSGVDDPELIQTLLSLGVDMDARDYAGRTPLAIASRAGHVKAARAXXXXXXXXXXXXXXXXXXXXXXXXXXXRSVIAALARHGXXXXXXXXXXXAVAAVDVQREXXXXXXXXXXXXXXXXXLVRCGADARHENCWGEQGGTLAKGYKARGGREILEQLPPDLILAISDNQPLVIEVLDGGCGDASCSSSSGSDDIDQLRRWQCTSAGVEFLAIPTFRSINYLARAGGIDVSIAEGGTVYTTDMLVVSSKATECIRMLLPMALSPDSPIRCLEGPVLTIFSTNSGTWLMQEGLFMRMASASKLLENRRHNDSCTVPWREECTSTSAASGASSPLSCHSLRGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTARRARWLPGWLLRWAAPGVLAPSGGKEAIDCV 445
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|346700 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YWF3_9STRA2.630e-230100.00Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 123..152
e-value: 150.0
score: 11.1
coord: 80..116
e-value: 0.62
score: 19.1
coord: 47..76
e-value: 0.0092
score: 25.2
coord: 12..43
e-value: 0.0058
score: 25.8
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 80..151
e-value: 2.1E-7
score: 31.4
coord: 12..78
e-value: 1.5E-9
score: 38.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 80..104
score: 10.95327
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 12..46
score: 11.00669
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 47..79
score: 12.39561
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 85..179
e-value: 2.1E-11
score: 45.9
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 2..84
e-value: 2.4E-23
score: 84.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 7..173
NoneNo IPR availablePANTHERPTHR24134ANKYRIN REPEAT-CONTAINING PROTEIN DDB_G0279043coord: 5..104
coord: 77..232
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 80..104
score: 10.922203
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 47..78
score: 11.426298
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 12..45
score: 9.754822

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_4contigContig_4:1251640..1256142 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|346700mRNA_1670Tribonema minus UTEX_B_3156 mRNAContig_4 1251283..1256142 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|346700|estExt_Genemark1.C_Ctg_40135 ID=Trimin1|346700|estExt_Genemark1.C_Ctg_40135|Name=jgi.p|Trimin1|346700|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=446bp
MNSCTTDASGGGGWSALHHACDSGVDDPELIQTLLSLGVDMDARDYAGRT
PLAIASRAGHVKAARALLDAGADAAVRDVDGRTPLHYAALRGHRSVIAAL
ARHGGGGGGGGGGAAAVAAVDVQRETPLFAATRGGHAAAAAALVRCGADA
RHENCWGEQGGTLAKGYKARGGREILEQLPPDLILAISDNQPLVIEVLDG
GCGDASCSSSSGSDDIDQLRRWQCTSAGVEFLAIPTFRSINYLARAGGID
VSIAEGGTVYTTDMLVVSSKATECIRMLLPMALSPDSPIRCLEGPVLTIF
STNSGTWLMQEGLFMRMASASKLLENRRHNDSCTVPWREECTSTSAASGA
SSPLSCHSLRGAAATATTAAAREEAAAAHPAAAAARAPAAAPLRRGAAPC
ATVAAAAAASSGTARRARWLPGWLLRWAAPGVLAPSGGKEAIDCV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf