Trimin1|346660|estExt_Genemark1.C_Ctg_40062 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|346660
Unique NameTrimin1|346660|estExt_Genemark1.C_Ctg_40062
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1452
Homology
BLAST of jgi.p|Trimin1|346660 vs. uniprot
Match: A0A836CD41_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD41_9STRA)

HSP 1 Score: 2353 bits (6099), Expect = 0.000e+0
Identity = 1451/1451 (100.00%), Postives = 1451/1451 (100.00%), Query Frame = 0
Query:    1 MVDYEGEGKQMPDFNALDKLKNSELPPWAVRQQKVFTNWINNKVAIRLLKADNLFRTPTDGVAVRLLKXXXXXXXXXXXXXXXXXXXVLYNLLEVLSRQSLAVLGKIRPERNRIKKVANMNIVWKYLGTTVRLVGIGPIDIVDGNTTLTLGMIWSLIVFFMAKDLGESEKEDLASLKRKIMEWLKGRTKHHPDINVHNFTDSLADGKAFMAIMEGAXXXXXXXXXXXXXXXXXXXXXXXXXADPVQCPYTPSADPKENLRRAFKNAENLFGVGSILDPEDPACCSDKKANITNLAELLKVMPEVETAPXXXXXXXXXXXXXXXXXXXXXVVKKGDPRQQALDYAAAHPGDPIDRLKELCAIRPRDEQAAAAKALDCAXXXXXXXXXXXXXXXXRAGSGCKXXXXXXXXXXXXRPKDEQAAAAKVAQFMEDAGMQGVHVMPANVAGSSAPYIVGEREGPAGAPTVLLYCTYGSEEDDEATAAKWASDPFDAKIEDGRITAKAAFQDKANVVAPLAAIEALLKGPQCKDLPCTLRILVGGTPPPQAQKGDAPLALTDGLADFIRAHPGDVGVPDYVIVSDPGGSTLAPDKATVGFGCRGFATMDIRVSTFVEEKDASKQXXXXXXXGKWRFMCNYGPIARGKRRSVCDYGGPLLDPAFVLATILASLRDSETGELCVEGVKGAPDKVTSEKLRHIHFGEHHLRPHTGYKPEIPCAKESYVRDGVVSXXXXXXVVGATIAEQLTLLPAVTVTSLAMSSGKENGPVSAEFALWASASLHLCLAPEQDVGQTIKALKAHINAAVPFGVEVEYSNIRGHRGWSTHPNAAIVEALSAARGLAECRRGAVAVGSPNFQPLPCAFAAALXXXXXXXXXXXXXXXXXXVVTFGVHDADAHAAAANESARAEDISDYVRTTIELLHYLAHGPPKPEEPLSPSAAADGGGDARTAYAAKHMDDLERRQAANXXXXXXXXXXXXXKMRAGGSLSPGALLPPPPLSAHTRDRSNSGHRLSLQHGTGLTPVSVSHPPSPTTFFGGPSPLPPGSLSMGNSPMAGAAAAADARRSSGRMAYMEGVVKGPPPPLPPRSHARGGSILDPSMLPAKILDEVSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGINTVRADPAGYALRELEPLLHCYGAGGVYTPPGGGQPRVTSEGANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKALEDALLVLKRTPPAPPLSRIPEMDKASQDHASDLGETGQTSHAGSDGSKTADRINRYGQASAAYSSFFQVAGEVISVYESSAVGIVCQMLINDGERTRQNEAKHEKIXXXXXXXXXXRKSIIGQHFKVCGVATAPHPSVGTVGVVTLAGGWGPKSLEREALVSVEPGEDPSPEFERVLESIPVPQVTDEVRKAIAAGLAVELDYKPGEVKLTVKQRDGSASLLSCQWG 1451
            MVDYEGEGKQMPDFNALDKLKNSELPPWAVRQQKVFTNWINNKVAIRLLKADNLFRTPTDGVAVRLLKXXXXXXXXXXXXXXXXXXXVLYNLLEVLSRQSLAVLGKIRPERNRIKKVANMNIVWKYLGTTVRLVGIGPIDIVDGNTTLTLGMIWSLIVFFMAKDLGESEKEDLASLKRKIMEWLKGRTKHHPDINVHNFTDSLADGKAFMAIMEGAXXXXXXXXXXXXXXXXXXXXXXXXXADPVQCPYTPSADPKENLRRAFKNAENLFGVGSILDPEDPACCSDKKANITNLAELLKVMPEVETAPXXXXXXXXXXXXXXXXXXXXXVVKKGDPRQQALDYAAAHPGDPIDRLKELCAIRPRDEQAAAAKALDCAXXXXXXXXXXXXXXXXRAGSGCKXXXXXXXXXXXXRPKDEQAAAAKVAQFMEDAGMQGVHVMPANVAGSSAPYIVGEREGPAGAPTVLLYCTYGSEEDDEATAAKWASDPFDAKIEDGRITAKAAFQDKANVVAPLAAIEALLKGPQCKDLPCTLRILVGGTPPPQAQKGDAPLALTDGLADFIRAHPGDVGVPDYVIVSDPGGSTLAPDKATVGFGCRGFATMDIRVSTFVEEKDASKQXXXXXXXGKWRFMCNYGPIARGKRRSVCDYGGPLLDPAFVLATILASLRDSETGELCVEGVKGAPDKVTSEKLRHIHFGEHHLRPHTGYKPEIPCAKESYVRDGVVSXXXXXXVVGATIAEQLTLLPAVTVTSLAMSSGKENGPVSAEFALWASASLHLCLAPEQDVGQTIKALKAHINAAVPFGVEVEYSNIRGHRGWSTHPNAAIVEALSAARGLAECRRGAVAVGSPNFQPLPCAFAAALXXXXXXXXXXXXXXXXXXVVTFGVHDADAHAAAANESARAEDISDYVRTTIELLHYLAHGPPKPEEPLSPSAAADGGGDARTAYAAKHMDDLERRQAANXXXXXXXXXXXXXKMRAGGSLSPGALLPPPPLSAHTRDRSNSGHRLSLQHGTGLTPVSVSHPPSPTTFFGGPSPLPPGSLSMGNSPMAGAAAAADARRSSGRMAYMEGVVKGPPPPLPPRSHARGGSILDPSMLPAKILDEVSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGINTVRADPAGYALRELEPLLHCYGAGGVYTPPGGGQPRVTSEGANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKALEDALLVLKRTPPAPPLSRIPEMDKASQDHASDLGETGQTSHAGSDGSKTADRINRYGQASAAYSSFFQVAGEVISVYESSAVGIVCQMLINDGERTRQNEAKHEKIXXXXXXXXXXRKSIIGQHFKVCGVATAPHPSVGTVGVVTLAGGWGPKSLEREALVSVEPGEDPSPEFERVLESIPVPQVTDEVRKAIAAGLAVELDYKPGEVKLTVKQRDGSASLLSCQWG
Sbjct:    1 MVDYEGEGKQMPDFNALDKLKNSELPPWAVRQQKVFTNWINNKVAIRLLKADNLFRTPTDGVAVRLLKXXXXXXXXXXXXXXXXXXXVLYNLLEVLSRQSLAVLGKIRPERNRIKKVANMNIVWKYLGTTVRLVGIGPIDIVDGNTTLTLGMIWSLIVFFMAKDLGESEKEDLASLKRKIMEWLKGRTKHHPDINVHNFTDSLADGKAFMAIMEGAXXXXXXXXXXXXXXXXXXXXXXXXXADPVQCPYTPSADPKENLRRAFKNAENLFGVGSILDPEDPACCSDKKANITNLAELLKVMPEVETAPXXXXXXXXXXXXXXXXXXXXXVVKKGDPRQQALDYAAAHPGDPIDRLKELCAIRPRDEQAAAAKALDCAXXXXXXXXXXXXXXXXRAGSGCKXXXXXXXXXXXXRPKDEQAAAAKVAQFMEDAGMQGVHVMPANVAGSSAPYIVGEREGPAGAPTVLLYCTYGSEEDDEATAAKWASDPFDAKIEDGRITAKAAFQDKANVVAPLAAIEALLKGPQCKDLPCTLRILVGGTPPPQAQKGDAPLALTDGLADFIRAHPGDVGVPDYVIVSDPGGSTLAPDKATVGFGCRGFATMDIRVSTFVEEKDASKQXXXXXXXGKWRFMCNYGPIARGKRRSVCDYGGPLLDPAFVLATILASLRDSETGELCVEGVKGAPDKVTSEKLRHIHFGEHHLRPHTGYKPEIPCAKESYVRDGVVSXXXXXXVVGATIAEQLTLLPAVTVTSLAMSSGKENGPVSAEFALWASASLHLCLAPEQDVGQTIKALKAHINAAVPFGVEVEYSNIRGHRGWSTHPNAAIVEALSAARGLAECRRGAVAVGSPNFQPLPCAFAAALXXXXXXXXXXXXXXXXXXVVTFGVHDADAHAAAANESARAEDISDYVRTTIELLHYLAHGPPKPEEPLSPSAAADGGGDARTAYAAKHMDDLERRQAANXXXXXXXXXXXXXKMRAGGSLSPGALLPPPPLSAHTRDRSNSGHRLSLQHGTGLTPVSVSHPPSPTTFFGGPSPLPPGSLSMGNSPMAGAAAAADARRSSGRMAYMEGVVKGPPPPLPPRSHARGGSILDPSMLPAKILDEVSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGINTVRADPAGYALRELEPLLHCYGAGGVYTPPGGGQPRVTSEGANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKALEDALLVLKRTPPAPPLSRIPEMDKASQDHASDLGETGQTSHAGSDGSKTADRINRYGQASAAYSSFFQVAGEVISVYESSAVGIVCQMLINDGERTRQNEAKHEKIXXXXXXXXXXRKSIIGQHFKVCGVATAPHPSVGTVGVVTLAGGWGPKSLEREALVSVEPGEDPSPEFERVLESIPVPQVTDEVRKAIAAGLAVELDYKPGEVKLTVKQRDGSASLLSCQWG 1451          
BLAST of jgi.p|Trimin1|346660 vs. uniprot
Match: D8LHC6_ECTSI (Allergen V5/Tpx-1 related n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHC6_ECTSI)

HSP 1 Score: 613 bits (1581), Expect = 3.580e-193
Identity = 506/1428 (35.43%), Postives = 667/1428 (46.71%), Query Frame = 0
Query:  125 KYLGTTVRLVGIGPIDIVDGNTTLTLGMIWSLIVFFMAKDLGESEKEDLASLKRKIMEWLKGRTKHHPDINVHNFTDSLADGKAFMAIMEGAXXXXXXXXXXXXXXXXXXXXXXXXXADPVQCPYTPSADPKENLRRAFKNAENLFGVGSILDPEDPACCSDKKANITNLAELLKVMPEVETAPXXXXXXXXXXXXXXXXXXXXXVVKKGDPRQQALDYAA-AHPGDPIDRLKELCAIRPRDEQAAAAKALDCAXXXXXXXXXXXXXXXXRAGSGCKXXXXXXXXXXXXRPKDEQAAAAKVAQFMEDAGMQGVHVMPANVAGSSA-----PYIVGEREGPAGAPTVLLYCTYGS-EEDDEATAA-----------------KWASDPF---------------DAKIEDG--RITAKAAFQDKANVVAPLAAIEALLKGPQCKDLPCTLRILVGGTPPPQAQKGDAPLALTDGLADFIRAHPGDVGVPDYVIVSDPGGSTLAPDKATVGFGCRGFATMDIRVSTFVEEKDASKQXXXXXXXGKWRFMCNYGPIARGKRRSVCDYGGPLLDPAFVLATILASLRDSETGELCVEGVKGAPDK---VTSEKLRHIHFGEHHLRPHTGYKPEIPCAKESYVRDGVVSXXXXXXVVGATI--AEQLTLLPAVTVTSLAMSSGKENGP--------VSAEFALWASASLHLCLAPEQDVGQTIKALKAHINAAVPFGVEVEYSNIRGHRGW--STHPNAAIVEALSAARGLAECRRGA---------VAVGSPNFQPLPCAFAAALXXXXXXXXXXXXXXXXXXVVTFGVHDADAHAAAANESARAEDISDYVRTTIELLHYLAHGPPKPEEPLSPSAAA-DGGG-DARTAYAAKHMDDLERRQAANXXXXXXXXXXXXXKMRAGGSLSPGALLPPPPLSAHTRDRSNSGHRLSLQHGTGLTPVSVSHPPS--PTTFFGGPSPLPPGSLSMGNSPMAGAAAAADARRSSGRMAYMEGVVKGP-PPPLPPRSHARGGSILDPSMLPAKILDE--------------------------------VSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGINTVRADPAGYALRELEPLLHCYGAGGVYTPPGGGQPRVTSEGANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKALEDALLVLKRTPPAPPLSRIPEMDKASQDHASDLGETGQTSHAGSDGSKTADRINRYGQASAAYSSFFQVAGEVISVYESSAVGIVCQMLINDGERTRQNEAKHEKIXXXXXXXXXXRKSIIGQHFKVCGVATAPHPSVGTVGVVTLAGGWGPKSLEREALVSVEPGEDPSPEFERVLESIPVPQVTDEVRKAIAAGLAVELDYKPGEVKLTVKQRDGSASLLSCQW 1450
            +YLG TV+LVGIGP DIVDGN TLTLGMIWSLIVFFMA DLG++  + L  LK++IMEW+  RTK  PD+ V NFT SLADG+  +AI+                             DP Q PY PS+ P +NLRRAF++ + L+GVGSILDP+DP CC D+KANIT LAEL+K MPE E                        VV     RQ A+  +  + P   + RL+ELCA  P D                              G+ C                     A++VA+ M DAG+  V V+  +     A     P +VGE+ GP G+PTVL Y +YG+ +E  EA  A                 +WASDP                 A    G  R+ A+ + QDKANVV  +AA+EA+L+G     LPC ++++VG TPPP +  GDAPL + D LADF+RAHP   G+PD V+VS+P GS LAPDK  +  GCRGFA +++ VSTF +                            G RR   D+GGPL+DPA VLA I+ASL   ETGEL VEGV     K     +E +  + +GE  LR  TGY  E+ CA+    + G  S    XX        AEQL LLPAV++TS+                  + + F   A+A +H+CL P  +    ++AL++H     P G +V +  + G  GW   T  +  +   L++ R   +   G          V    P F  +P AFA AL                  VV  GV+D ++   AANES   +D+  +VR+ + L+H +A    K E+  S S    +G G DA TAY+ + +DDL+RR A N             ++R GG LS    +  P  SA+T  R  +   ++   G G +PV    P S  P+ F          +L        G                +    K P  P  PP S    G     S   A++L                                      X       XXXXXXXXXXXXXXXXX         L  IN +RADP GYA + LE L   Y  G   +P G   P  T+EG                                     K L + + +LK T    PL     M +A+ DH  DL ET +T H+GSDGS  ADR+NRYGQ       FFQVAGEV + ++++A GIV Q+L++DGER+R N                 RK+++  HFKVCG+A   HP+VG   V+TLAGG+GP+ L R A V  E G  PS EF  VLESIPVPQ+T+EV K +  G+ V+L Y PG +K T  Q  G+   + C+W
Sbjct:    2 RYLGNTVKLVGIGPTDIVDGNVTLTLGMIWSLIVFFMALDLGDAG-DGLTVLKKRIMEWMTRRTKDFPDVEVTNFTTSLADGRVLLAILNDY--------------------------DPSQSPYKPSSSPADNLRRAFEDFQRLYGVGSILDPDDPQCCEDEKANITYLAELMKAMPEYED----DDGEGGGRRGRKGVREAAAVVTT---RQAAIKISEDSFPETVVGRLRELCAFGPGD------------------------------GAAC---------------------ASRVAKMMRDAGLGDVKVVEPSQGREDASMRGDPIVVGEKAGPPGSPTVLFYASYGTVDESSEAGPAEGSGSPAQGSTINNDIERWASDPLCLTPTKRPSSSSPSQAAGSPKGGERLAARGSAQDKANVVCQIAAVEAMLEGGA--GLPCGVKVVVGATPPPGSLAGDAPLEVADRLADFLRAHPSLAGLPDLVVVSEPAGSRLAPDKNALLVGCRGFAFLEVAVSTFGD--------------------------GSGHRRGCADFGGPLIDPARVLANIVASLHHPETGELRVEGVSDLAPKEGEALAEAIGGLRYGEGQLRRDTGYSSEVACARGVCYKPGGSSPDKSXXXXXXXXXXAEQLALLPAVSITSIXXXXXXXXXXXXXXXXSLLGSRFPSTATAGIHMCLPPGAEYASAVRALQSHCAKRAPHGAKVRFDKVLGRAGWLAPTSGSPMVSGVLASLREEDDGEAGGPVEGGGRETVLASDPGFSAIPSAFARALPDSA--------------VVGLGVNDPESKGGAANESVLVDDLKGFVRSAVRLVHGVAESGGKKEKAGSSSGXVKEGAGEDAPTAYSNRFIDDLDRRNAVN-------------QLR-GGKLSN---VSSPAGSANTTPRGTNSRGIT-HSGAGGSPVRSRSPASRFPSGFS---------TLERNLEREGGGXXXXXXXXXXXXGGPLTPNAKHPLSPNRPPSSATTAGLSPADSASIAELLQSSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLGVMTPXXXXXXXXXXXXXXXXXVGGGTPETVLAEINELRADPKGYATK-LEALEEFYDKGMYQSPTG--PPVQTTEGV------------------------------------KPLLEVVAMLKTTEALAPLESKEGMQQAAADHVKDLAETSRTGHSGSDGSGAADRMNRYGQ-------FFQVAGEVCTYFDATAEGIVAQLLVSDGERSRHN-----------------RKALLAAHFKVCGIAIGTHPTVGAACVITLAGGYGPRPLSRSADVVCEAGSAPSAEFREVLESIPVPQITEEVSKCVEVGMEVQLQYTPGSIKCTFVQASGARKSMGCKW 1212          
BLAST of jgi.p|Trimin1|346660 vs. uniprot
Match: A0A7S2SPW9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPW9_9STRA)

HSP 1 Score: 194 bits (492), Expect = 7.520e-49
Identity = 128/349 (36.68%), Postives = 181/349 (51.86%), Query Frame = 0
Query:   28 WAVRQQKVFTNWINNKVAIRLLKADNLFRTPTDGVAVRLLKXXXXXXXXXXXXXXXXXXXVLYNLLEVLSRQSLAVLGKIRPERNRIKKVANMNIVWKYLGTTVRLVGIGPIDIVDGNTTLTLGMIWSLIVFFMAKDLGESEKEDLASLKRKIMEWLKGRTKHHPDIN-VHNFTDSLADGKAFMAIMEGAXXXXXXXXXXXXXXXXXXXXXXXXXADPVQCPYTPSADPKENLRRAFKNAENLFGVGSILDPEDPACCSDKKANITNLAELLKVMPEVETAPXXXXXXXXXXXXXXXXXXXXXVVKKGDPRQQALDYAAAHPGDPIDRLKELCAI--RPRDEQAAAAKA 373
            W  +Q+KVF+ WI+ K+A R +  DN++    DG                          VLYNLLEVLS QSL  LGK+   + RI+ VANMNIV+KYL  TV++VGIGP D+VDGN  L LG+IWS++VFF+AKDLG     D+ +++ KI++W+K  T  +PDI+ V +   SLADG+  MA++                             +P QCPY PS++PK++L +A  +AE ++GV  ++DPEDP   +D+K  I  LA L+  + E   AP                       + G     A+     +P D +D L  LCAI   P +E+   A A
Sbjct:   60 WVKQQEKVFSKWISVKLADRGVVVDNIYEDLKDGF-------------------------VLYNLLEVLSGQSLRPLGKMSKGKMRIQHVANMNIVFKYLEHTVKMVGIGPTDVVDGNF-LILGLIWSILVFFIAKDLGGLA--DMRAIRNKILKWIKKHTAKNPDIDDVEDLAQSLADGRVLMAVLNDF--------------------------NPHQCPYAPSSNPKQDLTQALDDAEKVYGVEKMIDPEDPLSTADEKFTIPYLANLMDKLHEA--APP----------------------QYGKVADDAVANVDKNPQDFVDDLVALCAIPSTPSNEEGLTAAA 330          
BLAST of jgi.p|Trimin1|346660 vs. uniprot
Match: A0A7S3JRK8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRK8_9STRA)

HSP 1 Score: 172 bits (436), Expect = 2.540e-40
Identity = 105/289 (36.33%), Postives = 155/289 (53.63%), Query Frame = 0
Query:   22 NSELPPWAVRQQKVFTNWINNKVAIR--LLKADNLFRTPTDGVAVRLLKXXXXXXXXXXXXXXXXXXXVLYNLLEVLSRQSLAVLGKIRP-----ERNRIKKVANMNIVWKYLGTTVRLVGIGPIDIVDGNTTLTLGMIWSLIVFFMAKDLGESEKEDLASLKRKIMEWLKGRTKHHPDINVHNFTDSLADGKAFMAIMEGAXXXXXXXXXXXXXXXXXXXXXXXXXADPVQCPYTPSADPKENLRRAFKNAENLFGVGSILDPEDPACCSDKKANITNLAELLKVMPE 303
            N   P W  RQ+++FTN+ N K+A R  +    ++     DG                          VLY LLEVLS QSLA LGKI+      E + I KVAN++I ++Y+  T ++VGIGP D+ DG+++L LG+IWSLIVFF AKDLG  +  D+++LK+KI++W + RT+ +PD+ + N  DS   G AF+AI+                             DPV  PY P++   +N ++AF +A   +GV  +LD  D     D ++ +T L+EL+K +PE
Sbjct:   19 NESEPKWLRRQRRLFTNFCNAKLADRDDIPPMTDILEDIKDG-------------------------RVLYALLEVLSGQSLAPLGKIKKPKAGKELSHIDKVANLSISFRYIHQTTKIVGIGPGDVADGHSSLVLGLIWSLIVFFTAKDLGGLD--DVSALKKKILKWCQKRTEKNPDVEIKNLKDSFMGGNAFLAILHDV--------------------------DPVGSPYEPTSSASKNYQKAFDDAAEKYGVPQLLDANDEDLWKDDQSMVTYLSELMKRLPE 254          
BLAST of jgi.p|Trimin1|346660 vs. uniprot
Match: F0Y3Q6_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3Q6_AURAN)

HSP 1 Score: 155 bits (392), Expect = 4.730e-39
Identity = 93/273 (34.07%), Postives = 145/273 (53.11%), Query Frame = 0
Query:   32 QQKVFTNWINNKVAIRLLKADNLFRTPTDGVAVRLLKXXXXXXXXXXXXXXXXXXXVLYNLLEVLSRQSLAVLGKIRPERNRIKKVANMNIVWKYL-GTTVRLVGIGPIDIVDGNTTLTLGMIWSLIVFFMAKDLGESEKEDLASLKRKIMEWLKGRTKHHPDINVHNFTDSLADGKAFMAIMEGAXXXXXXXXXXXXXXXXXXXXXXXXXADPVQCPYTPSADPKENLRRAFKNAENLFGVGSILDPEDPACCSDKKANITNLAELLKVMPE 303
            Q++ FT +IN+K+  R L   +L+    DG                          VLYN LEVL+  SL   GK+   + RI+ VANMN+V+K+     V+L  IG +D+VDG  T TLG+IWS+I F++ +DLG ++ +DL ++K+K+++W K + K H  + V + T S ADGKAF+AI+                             D    PY P+ D + N RRAF +AE+ +G+  +LDP+D +   D+ + +T LA ++  +P+
Sbjct:    2 QKRTFTRYINSKLKARNLVVGDLYEDLKDG-------------------------RVLYNFLEVLTGASLKKYGKLNSGKMRIQHVANMNVVFKFFPDADVKLENIGVMDVVDGTPTPTLGLIWSIIAFYLIRDLGGAD-DDLGAVKKKVLKWAKKKAKTH--VAVSDLTRSFADGKAFLAILNDT--------------------------DAAGSPYDPADDARANFRRAFGDAEDKYGLPQMLDPDDASLWEDEISMLTYLASMMDALPD 220          
BLAST of jgi.p|Trimin1|346660 vs. uniprot
Match: F0XZG2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZG2_AURAN)

HSP 1 Score: 154 bits (388), Expect = 5.960e-37
Identity = 93/262 (35.50%), Postives = 135/262 (51.53%), Query Frame = 0
Query:   26 PPWAVRQQKVFTNWINNKVAIR-LLKADNLFRTPTDGVAVRLLKXXXXXXXXXXXXXXXXXXXVLYNLLEVLSRQSLAVLGKIRPE------RNRIKKVANMNIVWKYLGTTVRLVGIGPIDIVDGNTTLTLGMIWSLIVFFMAKDLGESEKEDLASLKRKIMEWLKGRTKHHPDINVHNFTDSLADGKAFMAIMEGAXXXXXXXXXXXXXXXXXXXXXXXXXADPVQCPYTPSADPKENLRRAFKNAENLFGVGSILDPED 280
            P W  RQ+K+FTN++N K+  R +    N+F    DG                          +LY LLE LS QSLA +GKI+ +        RI  V+N++IV++Y+  T ++ GIGP D+ DGN TL LG++WSLIVFF A+DLG  +  D+++LK+K++ W + RT  +PD+ V N  DS   G+AF+AI+                             D    PY PSA    N + AF +A + +GV  +LD +D
Sbjct:   14 PKWLKRQRKLFTNFVNAKLMDRDISPVTNIFEDLKDG-------------------------RILYALLEELSGQSLAPIGKIKKKAPLKKAETRIDHVSNLSIVFRYINQTTKITGIGPADVADGNETLILGLLWSLIVFFTARDLGGVD--DVSALKKKLLRWAQKRTAKNPDVEVRNLKDSFKGGRAFLAILHDV--------------------------DAEGSPYEPSAVATHNFKTAFDDAADKYGVPVLLDGDD 222          
BLAST of jgi.p|Trimin1|346660 vs. uniprot
Match: A0A7S2SPY0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPY0_9STRA)

HSP 1 Score: 154 bits (388), Expect = 5.150e-34
Identity = 109/312 (34.94%), Postives = 154/312 (49.36%), Query Frame = 0
Query: 1142 INTVRADPAGYALRELEPLLHCYGAGGVYTPPGGGQPRVTSEGANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKALEDALLVLKRTPPAPPLSRIPEMDKASQDHASDLGETGQTSHAGSDGSKTADRINRYGQASAAYSSFFQVAGEVISVYESSAVGIVCQMLINDGERTRQNEAKHEKIXXXXXXXXXXRKSIIGQHFKVCGVATAPHPSVGTVGVVTLAGGWGPKSLEREALVSVEPGEDPSPE--FERVLESIPVPQVTDEVRKAIAAGLAVELDYKPG-EVKLTVKQRDGSASLLSCQW 1450
            +N +RADP  YA   LE  +  Y A  V+ PPG    + T EGA                                     A+ +A+  L+ T P P L R   MD+A++ HA+DL     T H GSDGSK++ R+ RYG+       + ++AGEVI+  E SA   V Q++I DGE+ R N                 R +++   F+VCG+A + HPS+ +V VV LAGG+GPK L    + S+        +  F+ VL+SIPVPQ+ ++V  A+  G  V LDYKPG     T KQ  G A+ ++C W
Sbjct:  766 LNRLRADPRAYAA-VLEASIAHYNAEKVFAPPGASVLKATHEGA------------------------------------AAVTEAVAQLQSTAPLPLLRRHALMDQAAKAHATDLATNDTTGHVGSDGSKSSARLRRYGE-------WHEIAGEVIAYREGSAAAFVEQLIICDGEQRRHN-----------------RTAVLSPEFRVCGIAASEHPSLESVVVVPLAGGFGPKPLAEATVASLSAASTAEEQETFQAVLDSIPVPQLHEQVAAALEDGAEVTLDYKPGGTATATFKQPSGEANAVACDW 1016          
BLAST of jgi.p|Trimin1|346660 vs. uniprot
Match: A0A8J2SPP9_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SPP9_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.260e-30
Identity = 86/279 (30.82%), Postives = 140/279 (50.18%), Query Frame = 0
Query:   26 PPWAVRQQKVFTNWINNKVAIRLLKADNLFRTPTDGVAVRLLKXXXXXXXXXXXXXXXXXXXVLYNLLEVLSRQSLAVLGKIRPERNRIKKVANMNIVWKYL-GTTVRLVGIGPIDIVDGNTTLTLGMIWSLIVFFMAKDLGESEKEDLASLKRKIMEWLKGRTKHHPDINVHNFTDSLADGKAFMAIMEGAXXXXXXXXXXXXXXXXXXXXXXXXXADPVQCPYTPSADPKENLRRAFKNAENLFGVGSILDPEDPACCSDKKANITNLAELLKVMPE 303
            P W   Q+K FT +IN K+A + L+ ++L+    DG                          +LY+ LE L+  SL   G++   R +I++VANMN+V+ +L    V++  IG +DIVDG     LG++WS+I F++ +D+G   + D+A++KR+++ W + R      I+  + T S  DGKAF+AI+                             D    PY PS +P EN  RAF +AE  +G+  +LD  +  C  D+ + +T LA +++ +PE
Sbjct:    5 PVWQQLQKKTFTRYINGKLASKGLQINDLYEDVKDG-------------------------KILYHFLEALTGASLKKYGRLNNGRMKIQRVANMNVVFAFLPDADVKISNIGVLDIVDGKPKSVLGLVWSIIAFYLVRDIGGGGERDVAAVKRRVLRWARRRCGRRAPIS--DLTKSFKDGKAFLAILNDV--------------------------DASGSPYEPSQNPVENFERAFSDAEQKYGLPRMLDTSED-CWRDEISMLTYLASMMETLPE 229          
BLAST of jgi.p|Trimin1|346660 vs. uniprot
Match: A0A7S2RXV1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RXV1_9STRA)

HSP 1 Score: 112 bits (279), Expect = 2.220e-24
Identity = 73/206 (35.44%), Postives = 110/206 (53.40%), Query Frame = 0
Query: 1246 MDKASQDHASDLGETGQTSHAGSDGSKTADRINRYGQASAAYSSFFQVAGEVISVYESSAVGIVCQMLINDGERTRQNEAKHEKIXXXXXXXXXXRKSIIGQHFKVCGVATAPHPSVGTVGVVTLAGGWGPKSLEREALVSVEPGEDP-SPEFERVLESIPVPQVTDEVRKAIAAGLAVELDYKPGEVKLTVKQRDGSASLLSCQW 1450
            MD ++  HA  L +  +T H G  GSK A+R++ +G+       + +VA E++    S    +V Q+L  DG+ +R N                 R S++ + F VCG+AT  HPS+G+V V+ LAGG+GPK L     VS      P + +F+RVLESIPVP + D +R A+A G  V+++Y PG+ ++      G      CQW
Sbjct:    2 MDLSAASHADFLRDGDRTGHTGPQGSKVAERLSEHGE-------WHEVAAEMLLYGSSDPRELVQQLLTCDGDPSRHN-----------------RLSLLSEEFHVCGLATRSHPSLGSVTVIPLAGGYGPKPLNDSVTVSCSHPVIPRTSQFQRVLESIPVPPMHDRIRAALAHGTTVQIEYAPGKARVLFIT-GGMRRTARCQW 182          
BLAST of jgi.p|Trimin1|346660 vs. uniprot
Match: A0A7S2RZ24_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZ24_9STRA)

HSP 1 Score: 120 bits (301), Expect = 5.870e-24
Identity = 99/313 (31.63%), Postives = 140/313 (44.73%), Query Frame = 0
Query: 1139 LRGINTVRADPAGYALRELEPLLHCYGAGGVYTPPGGGQPRVTSEGANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKALEDALLVLKRTPPAPPLSRIPEMDKASQDHASDLGETGQTSHAGSDGSKTADRINRYGQASAAYSSFFQVAGEVISVYESSAVGIVCQMLINDGERTRQNEAKHEKIXXXXXXXXXXRKSIIGQHFKVCGVATAPHPSVGTVGVVTLAGGWGPKSLEREALVSVEPGEDP-SPEFERVLESIPVPQVTDEVRKAIAAGLAVELDYKPGEVKLTVKQRDGSASLLSCQW 1450
            L  IN  R  P  YA    E L H       + PPG   PR T+EG                                     +AL  A+      P   PL+R   MD A+  HA  L +  +T H G  GSK A+R++ +G+       + +VA E++    S    +V Q+L  DG+ +R N                 R S++ + F VCG+AT  HPS+G+V V+ LAGG+GPK L     VS      P + +F+RVLESIPVP + D +R A+A G  V+++Y PG+ ++      G      CQW
Sbjct:  443 LHEINRARQSPGAYASEMAESLTHFRDK--RFAPPGR-PPRETNEGTEAVQEAVASL--------------------------RALAAAVEKHSGIPGVAPLARHHLMDLAAASHADFLRDGDRTGHTGPQGSKVAERLSEHGE-------WHEVAAEMLLYGSSDPRELVQQLLTCDGDPSRHN-----------------RLSLLSEEFHVCGLATRSHPSLGSVTVIPLAGGYGPKPLNDSVTVSCSHPVIPRTSQFQRVLESIPVPPMHDRIRAALAHGTTVQIEYAPGKARVLFIT-GGMRRTARCQW 701          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|346660 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CD41_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LHC6_ECTSI3.580e-19335.43Allergen V5/Tpx-1 related n=2 Tax=Ectocarpus TaxID... [more]
A0A7S2SPW9_9STRA7.520e-4936.68Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S3JRK8_9STRA2.540e-4036.33Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
F0Y3Q6_AURAN4.730e-3934.07Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
F0XZG2_AURAN5.960e-3735.50Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2SPY0_9STRA5.150e-3434.94Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8J2SPP9_9STRA1.260e-3030.82Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]
A0A7S2RXV1_9STRA2.220e-2435.44Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2RZ24_9STRA5.870e-2431.63Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001715Calponin homology domainSMARTSM00033ch_5coord: 32..159
e-value: 2.2E-9
score: 47.2
coord: 176..297
e-value: 0.18
score: 14.7
IPR001715Calponin homology domainPFAMPF00307CHcoord: 175..300
e-value: 1.2E-7
score: 31.9
coord: 33..159
e-value: 8.2E-10
score: 38.8
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 174..302
score: 13.070171
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 30..161
score: 16.201239
IPR035940CAP superfamilyGENE3D3.40.33.10CAPcoord: 1210..1368
e-value: 1.2E-9
score: 40.3
IPR036872CH domain superfamilyGENE3D1.10.418.10coord: 220..324
e-value: 6.9E-7
score: 31.2
coord: 175..219
e-value: 2.3E-5
score: 26.3
IPR036872CH domain superfamilyGENE3D1.10.418.10coord: 15..163
e-value: 8.2E-26
score: 92.4
IPR036872CH domain superfamilySUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 25..297
NoneNo IPR availableGENE3D3.30.70.360coord: 596..815
e-value: 4.7E-32
score: 113.5
NoneNo IPR availableGENE3D3.40.630.10Zn peptidasescoord: 417..901
e-value: 4.7E-32
score: 113.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1255..1275
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1174..1195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 944..971
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1235..1275
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1004..1019
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 917..1019
NoneNo IPR availablePANTHERPTHR11915SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINcoord: 26..294
NoneNo IPR availablePANTHERPTHR11915:SF435SPECTRIN BETA CHAINcoord: 26..294
NoneNo IPR availableCDDcd05379CAP_bacterialcoord: 1235..1371
e-value: 6.80088E-10
score: 56.2341
NoneNo IPR availableSUPERFAMILY53187Zn-dependent exopeptidasescoord: 378..918
IPR001589Actinin-type actin-binding domain, conserved sitePROSITEPS00019ACTININ_1coord: 32..41
IPR001589Actinin-type actin-binding domain, conserved sitePROSITEPS00020ACTININ_2coord: 133..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_4contigContig_4:639494..664981 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|346660mRNA_1599Tribonema minus UTEX_B_3156 mRNAContig_4 639395..664981 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|346660|estExt_Genemark1.C_Ctg_40062 ID=Trimin1|346660|estExt_Genemark1.C_Ctg_40062|Name=jgi.p|Trimin1|346660|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1452bp
MVDYEGEGKQMPDFNALDKLKNSELPPWAVRQQKVFTNWINNKVAIRLLK
ADNLFRTPTDGVAVRLLKVAVRLLKVDNLFTDLTDGVVLYNLLEVLSRQS
LAVLGKIRPERNRIKKVANMNIVWKYLGTTVRLVGIGPIDIVDGNTTLTL
GMIWSLIVFFMAKDLGESEKEDLASLKRKIMEWLKGRTKHHPDINVHNFT
DSLADGKAFMAIMEGAADGKAFMAIIEGAADGKAFMAIMEGADPVQCPYT
PSADPKENLRRAFKNAENLFGVGSILDPEDPACCSDKKANITNLAELLKV
MPEVETAPKANITYLAELMKVMPEVETAPVVKKGDPRQQALDYAAAHPGD
PIDRLKELCAIRPRDEQAAAAKALDCAAHPGDPVDRLKELCAIRAGSGCK
DPVDRLKELRAIRPKDEQAAAAKVAQFMEDAGMQGVHVMPANVAGSSAPY
IVGEREGPAGAPTVLLYCTYGSEEDDEATAAKWASDPFDAKIEDGRITAK
AAFQDKANVVAPLAAIEALLKGPQCKDLPCTLRILVGGTPPPQAQKGDAP
LALTDGLADFIRAHPGDVGVPDYVIVSDPGGSTLAPDKATVGFGCRGFAT
MDIRVSTFVEEKDASKQEKDASKQGKWRFMCNYGPIARGKRRSVCDYGGP
LLDPAFVLATILASLRDSETGELCVEGVKGAPDKVTSEKLRHIHFGEHHL
RPHTGYKPEIPCAKESYVRDGVVSYVRDGVVVGATIAEQLTLLPAVTVTS
LAMSSGKENGPVSAEFALWASASLHLCLAPEQDVGQTIKALKAHINAAVP
FGVEVEYSNIRGHRGWSTHPNAAIVEALSAARGLAECRRGAVAVGSPNFQ
PLPCAFAAALPSAKPLPCAFAAALPSAKVVTFGVHDADAHAAAANESARA
EDISDYVRTTIELLHYLAHGPPKPEEPLSPSAAADGGGDARTAYAAKHMD
DLERRQAANKHMDDLERRQAANKMRAGGSLSPGALLPPPPLSAHTRDRSN
SGHRLSLQHGTGLTPVSVSHPPSPTTFFGGPSPLPPGSLSMGNSPMAGAA
AAADARRSSGRMAYMEGVVKGPPPPLPPRSHARGGSILDPSMLPAKILDE
VSAAAAAAAAAALLPLPLLLMRCCRCCCAAAAAPLPLPLRGINTVRADPA
GYALRELEPLLHCYGAGGVYTPPGGGQPRVTSEGANGGKPRATSEGINGG
QLRVTSEGVNGGKPRDTSEGVKALEDALLVLKRTPPAPPLSRIPEMDKAS
QDHASDLGETGQTSHAGSDGSKTADRINRYGQASAAYSSFFQVAGEVISV
YESSAVGIVCQMLINDGERTRQNEAKHEKIINDGERTRQNRKSIIGQHFK
VCGVATAPHPSVGTVGVVTLAGGWGPKSLEREALVSVEPGEDPSPEFERV
LESIPVPQVTDEVRKAIAAGLAVELDYKPGEVKLTVKQRDGSASLLSCQW
G*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001715CH-domain
IPR035940CAP_sf
IPR036872CH_dom_sf
IPR001589Actinin_actin-bd_CS