Trimin1|346634|estExt_Genemark1.C_Ctg_40014 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|346634
Unique NameTrimin1|346634|estExt_Genemark1.C_Ctg_40014
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length316
Homology
BLAST of jgi.p|Trimin1|346634 vs. uniprot
Match: A0A836CCE0_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCE0_9STRA)

HSP 1 Score: 563 bits (1450), Expect = 1.450e-201
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0
Query:    1 MPTPASGFGSSPLNEPAAPSALRDGWGKATEVRAASVKDVAEKKPMDTRWEAWDVRSLRTYLQSQAATNEARQKQVCALGAFPALTKLLKCYYHKARLVKAATKGDLLELVVDWNVGFLTKEEFRAQAAGLGGVRRRVIDVWTEALAGNAMSIQLYVEQGEDIERKXXXXXXXXXXXXAPNNRMRRPLHCAVLGKSDACVRILLEGGADVGARDMDKATALHIAARQGKTVAVELLLQHGADALAKLDDGTKPGDKFDDSVTPETRXXXXXXXXXXXXEIKELLTKYIKKAADEAASPDGEGAAHADKKCCCVVS 315
            MPTPASGFGSSPLNEPAAPSALRDGWGKATEVRAASVKDVAEKKPMDTRWEAWDVRSLRTYLQSQAATNEARQKQVCALGAFPALTKLLKCYYHKARLVKAATKGDLLELVVDWNVGFLTKEEFRAQAAGLGGVRRRVIDVWTEALAGNAMSIQLYVEQGEDIERKXXXXXXXXXXXXAPNNRMRRPLHCAVLGKSDACVRILLEGGADVGARDMDKATALHIAARQGKTVAVELLLQHGADALAKLDDGTKPGDKFDDSVTPETRXXXXXXXXXXXXEIKELLTKYIKKAADEAASPDGEGAAHADKKCCCVVS
Sbjct:    1 MPTPASGFGSSPLNEPAAPSALRDGWGKATEVRAASVKDVAEKKPMDTRWEAWDVRSLRTYLQSQAATNEARQKQVCALGAFPALTKLLKCYYHKARLVKAATKGDLLELVVDWNVGFLTKEEFRAQAAGLGGVRRRVIDVWTEALAGNAMSIQLYVEQGEDIERKXXXXXXXXXXXXAPNNRMRRPLHCAVLGKSDACVRILLEGGADVGARDMDKATALHIAARQGKTVAVELLLQHGADALAKLDDGTKPGDKFDDSVTPETRXXXXXXXXXXXXEIKELLTKYIKKAADEAASPDGEGAAHADKKCCCVVS 315          
BLAST of jgi.p|Trimin1|346634 vs. uniprot
Match: A0A8C3J4H2_9CHAR (Protein phosphatase 1 regulatory subunit 16A n=1 Tax=Calidris pygmaea TaxID=425635 RepID=A0A8C3J4H2_9CHAR)

HSP 1 Score: 59.7 bits (143), Expect = 1.260e-6
Identity = 35/75 (46.67%), Postives = 43/75 (57.33%), Query Frame = 0
Query:  188 LHCAVLGKSDACVRILLEGGADVGARDMDKATALHIAARQGKTVAVELLLQHGADALAKLDDGTKPGDKFDDSVT 262
            LH   +      V +LL+GGADV ARD +  T LH AA  G  + V+LL+Q GAD LA   DG  P D  +D VT
Sbjct:  111 LHQCCIDDFGDVVTVLLDGGADVNARDSELWTPLHAAATCGHLLLVQLLIQRGADLLAVNSDGNMPYDLCEDEVT 185          
BLAST of jgi.p|Trimin1|346634 vs. uniprot
Match: UPI00071D47C3 (protein phosphatase 1 regulatory subunit 16A n=1 Tax=Calidris pugnax TaxID=198806 RepID=UPI00071D47C3)

HSP 1 Score: 60.1 bits (144), Expect = 1.270e-6
Identity = 36/75 (48.00%), Postives = 43/75 (57.33%), Query Frame = 0
Query:  188 LHCAVLGKSDACVRILLEGGADVGARDMDKATALHIAARQGKTVAVELLLQHGADALAKLDDGTKPGDKFDDSVT 262
            LH   +      V ILL+GGADV ARD +  T LH AA  G  + V+LL+Q GAD LA   DG  P D  +D VT
Sbjct:   37 LHQCCIDDFGDVVTILLDGGADVNARDSELWTPLHAAATCGHLLLVQLLIQRGADLLAVNSDGNMPYDLCEDEVT 111          
BLAST of jgi.p|Trimin1|346634 vs. uniprot
Match: F0Y731_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y731_AURAN)

HSP 1 Score: 53.1 bits (126), Expect = 1.400e-5
Identity = 30/56 (53.57%), Postives = 36/56 (64.29%), Query Frame = 0
Query:  198 ACVRILLEGGADVGARDMDKATALHIAARQGKTVAVELLLQHGADALAKLDDGTKP 253
            ACVR+LL+ GA+V   D D  TALHIA   G    V+LL+Q GA+  AK DDG  P
Sbjct:   33 ACVRLLLDAGAEVDLCDEDGDTALHIACGSGFEPIVKLLIQRGANLKAKNDDGWTP 88          
BLAST of jgi.p|Trimin1|346634 vs. uniprot
Match: UPI00105679C8 (ankyrin repeat domain-containing protein 53-like n=1 Tax=Gouania willdenowi TaxID=441366 RepID=UPI00105679C8)

HSP 1 Score: 56.6 bits (135), Expect = 2.240e-5
Identity = 38/74 (51.35%), Postives = 43/74 (58.11%), Query Frame = 0
Query:  186 RPLHCAVLGKS---DACVRILLEGGADVGARDMDKA-TALHIAARQGKTVAVELLLQHGADALAKLDDGTKPGD 255
            RPLH  V   S   DAC+R LLE GADV A   D   T LH+AA +G    VE+L+ HGAD LAK   G  P D
Sbjct:   91 RPLHMVVSSCSSNADACLRFLLEHGADVDACTTDSGQTPLHLAASKGHLDHVEMLVNHGADVLAKDRMGLTPVD 164          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|346634 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A836CCE0_9STRA1.450e-201100.00Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
A0A8C3J4H2_9CHAR1.260e-646.67Protein phosphatase 1 regulatory subunit 16A n=1 T... [more]
UPI00071D47C31.270e-648.00protein phosphatase 1 regulatory subunit 16A n=1 T... [more]
F0Y731_AURAN1.400e-553.57Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
UPI00105679C82.240e-551.35ankyrin repeat domain-containing protein 53-like n... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 216..245
e-value: 0.0045
score: 26.2
coord: 183..212
e-value: 1.3
score: 18.0
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 169..243
e-value: 1.2E-9
score: 38.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 183..215
score: 10.01842
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 216..248
score: 11.38063
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 137..309
e-value: 2.4E-22
score: 81.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 148..252
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availablePANTHERPTHR24193ANKYRIN REPEAT PROTEINcoord: 95..246
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 183..214
score: 8.95888
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 216..242
score: 11.134453

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_4contigContig_4:152208..160284 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|346634mRNA_1548Tribonema minus UTEX_B_3156 mRNAContig_4 152208..160526 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|346634|estExt_Genemark1.C_Ctg_40014 ID=Trimin1|346634|estExt_Genemark1.C_Ctg_40014|Name=jgi.p|Trimin1|346634|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=316bp
MPTPASGFGSSPLNEPAAPSALRDGWGKATEVRAASVKDVAEKKPMDTRW
EAWDVRSLRTYLQSQAATNEARQKQVCALGAFPALTKLLKCYYHKARLVK
AATKGDLLELVVDWNVGFLTKEEFRAQAAGLGGVRRRVIDVWTEALAGNA
MSIQLYVEQGEDIERKLYVDQGEDIERKAPNNRMRRPLHCAVLGKSDACV
RILLEGGADVGARDMDKATALHIAARQGKTVAVELLLQHGADALAKLDDG
TKPGDKFDDSVTPETRKYDDAVVPETRKEIKELLTKYIKKAADEAASPDG
EGAAHADKKCCCVVS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf