Trimin1|346586|estExt_Genemark1.C_Ctg_3_t10420 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|346586
Unique NameTrimin1|346586|estExt_Genemark1.C_Ctg_3_t10420
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length205
Homology
BLAST of jgi.p|Trimin1|346586 vs. uniprot
Match: A0A836CEV0_9STRA (Snf7-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEV0_9STRA)

HSP 1 Score: 374 bits (959), Expect = 2.000e-130
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0
Query:    1 MGNKVSLEEELINMRLTSKQMQRASKKCEKNEASAKNRVKLSIQKGNMEGAKIEAQNAIREKNQALNYLRLSSRIDAVSSRLETAIRTKQMNKSMEGVVKGMKSALASMDVERISSTMDQFEKQFEDMDVVAGYMENSMGTTTAMSTPPDQVDNLIQMVADEHGLEVGSKLDDAGRVGTTVPAAQQQPAQEVDALAQRLADLRK 204
            MGNKVSLEEELINMRLTSKQMQRASKKCEKNEASAKNRVKLSIQKGNMEGAKIEAQNAIREKNQALNYLRLSSRIDAVSSRLETAIRTKQMNKSMEGVVKGMKSALASMDVERISSTMDQFEKQFEDMDVVAGYMENSMGTTTAMSTPPDQVDNLIQMVADEHGLEVGSKLDDAGRVGTTVPAAQQQPAQEVDALAQRLADLRK
Sbjct:    1 MGNKVSLEEELINMRLTSKQMQRASKKCEKNEASAKNRVKLSIQKGNMEGAKIEAQNAIREKNQALNYLRLSSRIDAVSSRLETAIRTKQMNKSMEGVVKGMKSALASMDVERISSTMDQFEKQFEDMDVVAGYMENSMGTTTAMSTPPDQVDNLIQMVADEHGLEVGSKLDDAGRVGTTVPAAQQQPAQEVDALAQRLADLRK 204          
BLAST of jgi.p|Trimin1|346586 vs. uniprot
Match: A0A836C887_9STRA (Snf7-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C887_9STRA)

HSP 1 Score: 288 bits (736), Expect = 1.690e-96
Identity = 158/204 (77.45%), Postives = 179/204 (87.75%), Query Frame = 0
Query:    1 MGNKVSLEEELINMRLTSKQMQRASKKCEKNEASAKNRVKLSIQKGNMEGAKIEAQNAIREKNQALNYLRLSSRIDAVSSRLETAIRTKQMNKSMEGVVKGMKSALASMDVERISSTMDQFEKQFEDMDVVAGYMENSMGTTTAMSTPPDQVDNLIQMVADEHGLEVGSKLDDAGRVGTTVPAAQQQPAQEVDALAQRLADLRK 204
            MGNKVSLE ELIN++LT+KQMQR+S KC K EA+AK +VK++IQKGNMEGAKI AQNAIREKNQ+LNYLRL+SRIDAV++RLETA+R KQ++KSM+GVVKGM+ AL +MDVERIS TMDQFEKQFEDMDVVAGYMENSMG TTAMSTP DQVD LIQMVADEHGLEV S+LDDAG+VG  VP A    A   D L+QRLADLRK
Sbjct:    1 MGNKVSLETELINLKLTAKQMQRSSTKCNKAEAAAKAKVKVAIQKGNMEGAKIAAQNAIREKNQSLNYLRLASRIDAVAARLETAVRMKQVDKSMQGVVKGMRKALKTMDVERISKTMDQFEKQFEDMDVVAGYMENSMGATTAMSTPADQVDQLIQMVADEHGLEVASQLDDAGKVGAAVPQAGPAAA---DDLSQRLADLRK 201          
BLAST of jgi.p|Trimin1|346586 vs. uniprot
Match: A0A7S3JWC9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JWC9_9STRA)

HSP 1 Score: 247 bits (631), Expect = 1.700e-80
Identity = 139/204 (68.14%), Postives = 164/204 (80.39%), Query Frame = 0
Query:    1 MGNKVSLEEELINMRLTSKQMQRASKKCEKNEASAKNRVKLSIQKGNMEGAKIEAQNAIREKNQALNYLRLSSRIDAVSSRLETAIRTKQMNKSMEGVVKGMKSALASMDVERISSTMDQFEKQFEDMDVVAGYMENSMGTTTAMSTPPDQVDNLIQMVADEHGLEVGSKLDDAGRVGTTVPAAQQQPAQEVDALAQRLADLRK 204
            MGNKVSL++ELIN+++TS+QM  ASKKCEK   +AKN+VK +I+KGNMEGA+I AQNAIREKNQALNYLR++SRIDAV+ RLETAIRT  M+K+M  VVKGM SAL SMDVE+IS TMD FEKQFEDMDV AGYMENSM  +TA +TP DQVD+LI  VADEH L++   LDDAG V T VP  Q+Q   + D LA RL  LR+
Sbjct:    1 MGNKVSLQDELINLKITSRQMTSASKKCEKGARTAKNQVKKAIEKGNMEGARIYAQNAIREKNQALNYLRMASRIDAVAQRLETAIRTNDMSKAMGNVVKGMSSALKSMDVEKISKTMDAFEKQFEDMDVRAGYMENSMNASTASATPEDQVDSLISEVADEHQLDLSFALDDAGAVSTKVPQEQKQSEGKED-LASRLDALRR 203          
BLAST of jgi.p|Trimin1|346586 vs. uniprot
Match: D7FUT2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUT2_ECTSI)

HSP 1 Score: 236 bits (601), Expect = 7.270e-76
Identity = 139/208 (66.83%), Postives = 158/208 (75.96%), Query Frame = 0
Query:    1 MGNKVSLEEELINMRLTSKQMQRASKKCEKNEASAKNRVKLSIQKGNMEGAKIEAQNAIREKNQALNYLRLSSRIDAVSSRLETAIRTKQMNKSMEGVVKGMKSALASMDVERISSTMDQFEKQFEDMDVVAGYMENSMGTTTAMSTPPDQVDNLIQMVADEHGLEVGSKLDDAGRVGTTVPA----AQQQPAQEVDALAQRLADLRK 204
            MGNKVSLE ELIN+RLTSKQ QR + KC KNE +AK +++ +I+ GN+EGA+I  QNAIREKNQ+LN LRLSSRIDAV+SRLETAIR KQ+NKSME            MDVERIS TMD FE+QFEDMDV AGYMEN+MG +TAMSTP +QVD LIQMVADE GLE+G +LDDAG V   VPA    A    A E D LA RLA LRK
Sbjct:    1 MGNKVSLENELINLRLTSKQQQRGAIKCTKNENAAKAKLREAIKAGNIEGARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQVNKSMEXXXXXXXXXXXXMDVERISKTMDSFEQQFEDMDVRAGYMENAMGDSTAMSTPQEQVDGLIQMVADEAGLELGEQLDDAGPVSNKVPAKPAAAPAAAAGEEDELANRLAALRK 208          
BLAST of jgi.p|Trimin1|346586 vs. uniprot
Match: A0A7S2L033_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L033_9STRA)

HSP 1 Score: 233 bits (595), Expect = 5.190e-75
Identity = 125/203 (61.58%), Postives = 167/203 (82.27%), Query Frame = 0
Query:    1 MGNKVSLEEELINMRLTSKQMQRASKKCEKNEASAKNRVKLSIQKGNMEGAKIEAQNAIREKNQALNYLRLSSRIDAVSSRLETAIRTKQMNKSMEGVVKGMKSALASMDVERISSTMDQFEKQFEDMDVVAGYMENSMGTTTAMSTPPDQVDNLIQMVADEHGLEVGSKLDDAGRVGTTVPAAQQQPAQEVDALAQRLADLR 203
            MGNK+SLE+ELIN+R+TSK M R+S KC+K+E +A +R+K +I++GN EGA+I AQ+AIREKNQA+N+LR++SRIDAV++RLETAIR   +NKSM+GVVKGM   +ASM++E +S TMD+FE+QFED+DV +GYME +M TTTA  TP DQVD+LI+ VADE+ LE+G    +AG VGTTVP+  ++ A + D LA RLA+LR
Sbjct:    1 MGNKISLEDELINLRITSKSMNRSSVKCKKSEKAALDRLKKAIKQGNTEGARIYAQDAIREKNQAVNHLRMASRIDAVAARLETAIRMDTVNKSMQGVVKGMSKGMASMNIEEMSKTMDKFEQQFEDLDVKSGYMEEAMNTTTATQTPADQVDHLIKYVADENQLELGDAFLEAGPVGTTVPSQPEKVAADKDDLAARLANLR 203          
BLAST of jgi.p|Trimin1|346586 vs. uniprot
Match: A0A7S1Z7S6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z7S6_TRICV)

HSP 1 Score: 224 bits (570), Expect = 3.360e-71
Identity = 122/204 (59.80%), Postives = 159/204 (77.94%), Query Frame = 0
Query:    1 MGNKVSLEEELINMRLTSKQMQRASKKCEKNEASAKNRVKLSIQKGNMEGAKIEAQNAIREKNQALNYLRLSSRIDAVSSRLETAIRTKQMNKSMEGVVKGMKSALASMDVERISSTMDQFEKQFEDMDVVAGYMENSMGTTTAMSTPPDQVDNLIQMVADEHGLEVGSKLDDAGRVGTTVPAAQQQPAQEV-DALAQRLADLR 203
            MGNK+SLE+ELIN+R+TSKQMQR++KKCEKNE +A  ++K +I++GN EGA+I  Q+AIREKNQALN +R++SRIDAVSSR+ETA+R  Q+  SM+GVVKGM+  L SM++E++S+TMD+FE QFED+DV   YME +M  TTA STP +QVD LI MVADE+ LE+G    +AG VG   P  +Q   + V D L  RLA+LR
Sbjct:    1 MGNKISLEDELINLRITSKQMQRSAKKCEKNEKAALEKLKKAIKQGNAEGARIYGQDAIREKNQALNCIRMASRIDAVSSRIETAVRMNQVTSSMKGVVKGMEKGLQSMNIEQLSATMDKFESQFEDLDVKTQYMEGAMNATTATSTPAEQVDELITMVADENNLELGDAFAEAGPVGKKAPEVKQPEKESVQDDLEARLANLR 204          
BLAST of jgi.p|Trimin1|346586 vs. uniprot
Match: A0A6U5G2I4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A6U5G2I4_9STRA)

HSP 1 Score: 221 bits (563), Expect = 4.020e-70
Identity = 120/205 (58.54%), Postives = 161/205 (78.54%), Query Frame = 0
Query:    1 MGNKVSLEEELINMRLTSKQMQRASKKCEKNEASAKNRVKLSIQKGNMEGAKIEAQNAIREKNQALNYLRLSSRIDAVSSRLETAIRTKQMNKSMEGVVKGMKSALASMDVERISSTMDQFEKQFEDMDVVAGYMENSMGTTTAMSTPPDQVDNLIQMVADEHGLEVGSKLDDAGRVGTTVPAAQQQPAQE--VDALAQRLADLR 203
            MGNKVSLEEELIN+R+ SKQMQR+SKKCEKNE +A  ++K +IQ+GN EGA+I AQ+AIREKNQAL++L+++SRIDA ++R+ETA+R   + K M GV KG+  +LASMD+E+IS+ MD+FE+QFED+DV   YME SM  TTA STP  QVD+L++MVAD++ LE+G    +AG VG   P  +Q+ A++   D+L  RLA+LR
Sbjct:    1 MGNKVSLEEELINLRIVSKQMQRSSKKCEKNEKAATQKLKKAIQQGNSEGARIYAQDAIREKNQALSHLKMASRIDACANRVETAVRMDTVTKGMMGVTKGLDKSLASMDIEKISALMDKFEQQFEDLDVKTQYMEGSMNATTATSTPAGQVDDLVRMVADQNNLELGEAFIEAGPVGKKTPQLKQETAEDPVADSLEARLANLR 205          
BLAST of jgi.p|Trimin1|346586 vs. uniprot
Match: A0A2D4BK45_PYTIN (Charged multivesicular body protein 1b-2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK45_PYTIN)

HSP 1 Score: 220 bits (561), Expect = 8.350e-70
Identity = 119/203 (58.62%), Postives = 159/203 (78.33%), Query Frame = 0
Query:    2 GNKVSLEEELINMRLTSKQMQRASKKCEKNEASAKNRVKLSIQKGNMEGAKIEAQNAIREKNQALNYLRLSSRIDAVSSRLETAIRTKQMNKSMEGVVKGMKSALASMDVERISSTMDQFEKQFEDMDVVAGYMENSMGTTTAMSTPPDQVDNLIQMVADEHGLEVGSKLDDAGRVGTTVPAAQQQPAQEVDALAQRLADLRK 204
              K  LE+EL NM+ T+K + R +KKCEKN+A+ K ++K +I++GNMEGA+I AQN IREKNQ+L+YL+L+SRIDAV+SR++TAI   Q+  +M GVVKGM + +ASM+VE+ISSTMDQFEK FED+DV + YME +M   T++STP DQVD+LIQMVAD++GL+V  +LD AGRV T +P+A  Q  +  D L+ RLA LRK
Sbjct:    5 SRKDKLEDELFNMKFTAKNLLRCAKKCEKNQAAQKTKLKKAIEQGNMEGARIYAQNVIREKNQSLSYLQLASRIDAVASRVQTAIAMGQLKTNMRGVVKGMDTVMASMNVEKISSTMDQFEKHFEDLDVRSAYMEGAMSNGTSISTPVDQVDDLIQMVADDNGLKVAGQLDSAGRVVTDLPSAAVQEKKAEDELSMRLAALRK 207          
BLAST of jgi.p|Trimin1|346586 vs. uniprot
Match: A0A8J2SVV2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SVV2_9STRA)

HSP 1 Score: 220 bits (560), Expect = 8.830e-70
Identity = 125/204 (61.27%), Postives = 152/204 (74.51%), Query Frame = 0
Query:    1 MGNKVSLEEELINMRLTSKQMQRASKKCEKNEASAKNRVKLSIQKGNMEGAKIEAQNAIREKNQALNYLRLSSRIDAVSSRLETAIRTKQMNKSMEGVVKGMKSALASMDVERISSTMDQFEKQFEDMDVVAGYMENSMGTTTAMSTPPDQVDNLIQMVADEHGLEVGSKLDDAGRVGTTVPAAQQQPAQEVDALAQRLADLRK 204
            MG +VSL+EELINM++TSKQM  ASKKCEKNE   +  VK +I+KGN EGA+I AQNAIREKN  LNYLR+S+RIDAV+ RL+T ++ + M KS+  V KG+ SAL SM+VE+IS  MD FEKQFED+DV A YME++MG TTA +TP DQVD LI  VADEH L+V   LDDAG+VG T PA  + P      LA RL  LR+
Sbjct:    1 MGQRVSLQEELINMKITSKQMVSASKKCEKNEKKYRKDVKKAIEKGNAEGARIYAQNAIREKNSGLNYLRMSARIDAVAQRLDTVVKNQAMQKSIVKVNKGLSSALKSMNVEKISKEMDAFEKQFEDIDVRAKYMEDAMGNTTASATPEDQVDALISQVADEHQLDVSFALDDAGQVGHTAPAQAEDP------LASRLEALRR 198          
BLAST of jgi.p|Trimin1|346586 vs. uniprot
Match: A0A8K1CUU3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUU3_PYTOL)

HSP 1 Score: 219 bits (559), Expect = 1.680e-69
Identity = 120/201 (59.70%), Postives = 158/201 (78.61%), Query Frame = 0
Query:    4 KVSLEEELINMRLTSKQMQRASKKCEKNEASAKNRVKLSIQKGNMEGAKIEAQNAIREKNQALNYLRLSSRIDAVSSRLETAIRTKQMNKSMEGVVKGMKSALASMDVERISSTMDQFEKQFEDMDVVAGYMENSMGTTTAMSTPPDQVDNLIQMVADEHGLEVGSKLDDAGRVGTTVPAAQQQPAQEVDALAQRLADLRK 204
            K  LE+EL NM+ T+K + R +KKCEKN+A+ K ++K +I++GNMEGA+I AQN IREKNQAL+YL+L+SRIDAV+SR++TAI   Q+ ++M GVVKGM + +ASM+VE+IS TMDQFE+QFED+DV A YME +M   T+M+TP DQVD+LIQMVADE+GL+V  +LD AG VGT +P A     +  D L+ RLA LRK
Sbjct:    7 KNKLEDELFNMKFTAKSLIRNAKKCEKNQAAQKIKLKKAIEQGNMEGARIYAQNVIREKNQALSYLQLASRIDAVASRVQTAIAMGQLKQNMSGVVKGMDTVMASMNVEKISRTMDQFEQQFEDLDVRAAYMEGAMSNGTSMTTPVDQVDDLIQMVADENGLKVAGQLDSAGMVGTELPTAAAAEKKSQDDLSMRLAALRK 207          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|346586 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CEV0_9STRA2.000e-130100.00Snf7-domain-containing protein n=1 Tax=Tribonema m... [more]
A0A836C887_9STRA1.690e-9677.45Snf7-domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S3JWC9_9STRA1.700e-8068.14Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
D7FUT2_ECTSI7.270e-7666.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2L033_9STRA5.190e-7561.58Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1Z7S6_TRICV3.360e-7159.80Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A6U5G2I4_9STRA4.020e-7058.54Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A2D4BK45_PYTIN8.350e-7058.62Charged multivesicular body protein 1b-2 n=1 Tax=P... [more]
A0A8J2SVV2_9STRA8.830e-7061.27Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8K1CUU3_PYTOL1.680e-6959.70Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.10.140.1230coord: 3..173
e-value: 1.2E-37
score: 131.4
NoneNo IPR availablePANTHERPTHR10476:SF2CHARGED MULTIVESICULAR BODY PROTEIN 1Bcoord: 8..204
IPR005024Snf7 familyPFAMPF03357Snf7coord: 13..167
e-value: 3.5E-14
score: 52.8
IPR005024Snf7 familyPANTHERPTHR10476CHARGED MULTIVESICULAR BODY PROTEINcoord: 8..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_3contigContig_3:1453105..1458082 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|346586mRNA_425Tribonema minus UTEX_B_3156 mRNAContig_3 1452861..1458467 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|346586|estExt_Genemark1.C_Ctg_3_t10420 ID=Trimin1|346586|estExt_Genemark1.C_Ctg_3_t10420|Name=jgi.p|Trimin1|346586|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=205bp
MGNKVSLEEELINMRLTSKQMQRASKKCEKNEASAKNRVKLSIQKGNMEG
AKIEAQNAIREKNQALNYLRLSSRIDAVSSRLETAIRTKQMNKSMEGVVK
GMKSALASMDVERISSTMDQFEKQFEDMDVVAGYMENSMGTTTAMSTPPD
QVDNLIQMVADEHGLEVGSKLDDAGRVGTTVPAAQQQPAQEVDALAQRLA
DLRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam