Trimin1|346468|estExt_Genemark1.C_Ctg_10311 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|346468
Unique NameTrimin1|346468|estExt_Genemark1.C_Ctg_10311
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length261
Homology
BLAST of jgi.p|Trimin1|346468 vs. uniprot
Match: A0A835ZG58_9STRA (BTB_2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG58_9STRA)

HSP 1 Score: 461 bits (1186), Expect = 3.600e-163
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0
Query:    1 MSNACASPDNTRTPTAATAXXXXXXXXXXXXXXXXXXXXXXXXXAPLENDPASGAFFLDRDWWVFRYVLQFLRSGALPHDAALLREMHEEAAFYRLDTLRRAIAGRMESAATAQQQRHHCSSKPGGATMLETSPIRAYGGPSWATTQRGDAHYLDDYGRSGGAVGGGHWRDGGSGGAELRTQARTPLPDPPSLLPQSSIPCHQCRLCLSAAAATAPPFFAPPAPLRDSDVTVPTLHAGSLTDERFSHAASTMIASFTADV 260
            MSNACASPDNTRTPTAATAXXXXXXXXXXXXXXXXXXXXXXXXXAPLENDPASGAFFLDRDWWVFRYVLQFLRSGALPHDAALLREMHEEAAFYRLDTLRRAIAGRMESAATAQQQRHHCSSKPGGATMLETSPIRAYGGPSWATTQRGDAHYLDDYGRSGGAVGGGHWRDGGSGGAELRTQARTPLPDPPSLLPQSSIPCHQCRLCLSAAAATAPPFFAPPAPLRDSDVTVPTLHAGSLTDERFSHAASTMIASFTADV
Sbjct:    1 MSNACASPDNTRTPTAATAXXXXXXXXXXXXXXXXXXXXXXXXXAPLENDPASGAFFLDRDWWVFRYVLQFLRSGALPHDAALLREMHEEAAFYRLDTLRRAIAGRMESAATAQQQRHHCSSKPGGATMLETSPIRAYGGPSWATTQRGDAHYLDDYGRSGGAVGGGHWRDGGSGGAELRTQARTPLPDPPSLLPQSSIPCHQCRLCLSAAAATAPPFFAPPAPLRDSDVTVPTLHAGSLTDERFSHAASTMIASFTADV 260          
BLAST of jgi.p|Trimin1|346468 vs. uniprot
Match: A0A835ZHY9_9STRA (BTB/POZ protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHY9_9STRA)

HSP 1 Score: 220 bits (561), Expect = 7.040e-68
Identity = 120/176 (68.18%), Postives = 125/176 (71.02%), Query Frame = 0
Query:   45 APLENDPASGAFFLDRDWWVFRYVLQFLRSGALPHDAALLREMHEEAAFYRLDTLRRAIAGR-----------------------------MESAATAQQQRHHCSSKPGGATMLETSPIRAYGGPSWATTQRGD-AHYLDDYGRSGGAVGGGHWRDGGSGGAELRTQARTPLPDP 190
            AP+E DPASGAFFLDRDWWVFRYVLQFLRSGALP D ALLREMHEEAAFYRL+TLRRAIAGR                             ME A TAQQQRHHCSS+ GG TML+TSPIRAYGGPSWATTQR D AHYLDDYG SG      HWR   S  A+ RTQARTPLPDP
Sbjct:  104 APVEKDPASGAFFLDRDWWVFRYVLQFLRSGALPDDGALLREMHEEAAFYRLETLRRAIAGRCAQAXXXXXXXXXXXXXXXXXXXXXXXXXMELALTAQQQRHHCSSESGGQTMLQTSPIRAYGGPSWATTQRDDDAHYLDDYGGSGXXXXXXHWRGXXSXXAQGRTQARTPLPDP 279          
BLAST of jgi.p|Trimin1|346468 vs. uniprot
Match: A0A7S3UWV8_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWV8_HETAK)

HSP 1 Score: 88.6 bits (218), Expect = 1.810e-17
Identity = 41/55 (74.55%), Postives = 49/55 (89.09%), Query Frame = 0
Query:   52 ASGAFFLDRDWWVFRYVLQFLRSGALPHDAALLREMHEEAAFYRLDTLRRAIAGR 106
            A GAFFLDRDW++FRY+LQFLRSG LP DAALLRE++ EA+FYRL+TLR+AI  R
Sbjct:  128 ADGAFFLDRDWFLFRYILQFLRSGTLPEDAALLRELYVEASFYRLNTLRKAIKER 182          
BLAST of jgi.p|Trimin1|346468 vs. uniprot
Match: A0A7S2FDC8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FDC8_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.160e-15
Identity = 45/93 (48.39%), Postives = 62/93 (66.67%), Query Frame = 0
Query:   52 ASGAFFLDRDWWVFRYVLQFLRSGALPHDAALLREMHEEAAFYRLDTLRRAIAGRMESAATAQQQRHHCSSKPGGATMLETSPIRAYGGPSWA 144
            +SGAFFLDRDWW+FR++LQFLR+ +LP D  LL EM+ EA FYRL +LR+AI  R  +A+T   +    +++P   T  ET P+    G + A
Sbjct:  115 SSGAFFLDRDWWIFRHILQFLRTDSLPDDPLLLEEMYNEATFYRLGSLRKAIEDR-NAASTYYLRERAEATRP---TYDETRPVYERSGVNMA 203          
BLAST of jgi.p|Trimin1|346468 vs. uniprot
Match: A0A7S2S0D9_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S0D9_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 2.640e-13
Identity = 33/52 (63.46%), Postives = 43/52 (82.69%), Query Frame = 0
Query:   52 ASGAFFLDRDWWVFRYVLQFLRSGALPHDAALLREMHEEAAFYRLDTLRRAI 103
            A+G+ F+DRDWW+FRYVLQFLR+G LP D  LL E+++EA+FYRL  L+ AI
Sbjct:  118 AAGSVFIDRDWWIFRYVLQFLRTGDLPSDPRLLGELYDEASFYRLSLLKNAI 169          
BLAST of jgi.p|Trimin1|346468 vs. uniprot
Match: A0A482SJR7_9ARCH (BTB domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJR7_9ARCH)

HSP 1 Score: 72.4 bits (176), Expect = 2.910e-12
Identity = 29/58 (50.00%), Postives = 46/58 (79.31%), Query Frame = 0
Query:   46 PLENDPASGAFFLDRDWWVFRYVLQFLRSGALPHDAALLREMHEEAAFYRLDTLRRAI 103
            PL    A G+F+ DRDWW+FR++L F+RS  LP++   L+E+++EA++YRL++L+RAI
Sbjct:   56 PLIERSADGSFYFDRDWWLFRHILSFMRSRKLPNELQTLKELYKEASYYRLESLQRAI 113          
BLAST of jgi.p|Trimin1|346468 vs. uniprot
Match: A0A2D4BYU4_PYTIN (BTB_2 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYU4_PYTIN)

HSP 1 Score: 75.5 bits (184), Expect = 4.970e-12
Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = 0
Query:   46 PLENDPASGAFFLDRDWWVFRYVLQFLRSGALPHDAALLREMHEEAAFYRLDTLRRAIAGRMESAATAQQQRHHCSSKPGGATMLETSPIRAYGGPSWA 144
            PLE     G F +DRDWW+FRYVL FLR G LP D  LLRE++ E+ F++L+++R+AI  +       +QQ H   +    A +L ++P  A G  + A
Sbjct:  192 PLE----CGCFRVDRDWWLFRYVLHFLRDGLLPQDPKLLRELYLESEFWKLESMRKAIEMKNMELLQLKQQ-HDAKTAAAAAAVLASAPTTASGNAAHA 285          
BLAST of jgi.p|Trimin1|346468 vs. uniprot
Match: A0A2D4BZS6_PYTIN (BTB_2 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZS6_PYTIN)

HSP 1 Score: 75.5 bits (184), Expect = 7.040e-12
Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = 0
Query:   46 PLENDPASGAFFLDRDWWVFRYVLQFLRSGALPHDAALLREMHEEAAFYRLDTLRRAIAGRMESAATAQQQRHHCSSKPGGATMLETSPIRAYGGPSWA 144
            PLE     G F +DRDWW+FRYVL FLR G LP D  LLRE++ E+ F++L+++R+AI  +       +QQ H   +    A +L ++P  A G  + A
Sbjct:  192 PLE----CGCFRVDRDWWLFRYVLHFLRDGLLPQDPKLLRELYLESEFWKLESMRKAIEMKNMELLQLKQQ-HDAKTAAAAAAVLASAPTTASGNAAHA 285          
BLAST of jgi.p|Trimin1|346468 vs. uniprot
Match: A0A8K1CRI1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRI1_PYTOL)

HSP 1 Score: 74.7 bits (182), Expect = 9.870e-12
Identity = 36/81 (44.44%), Postives = 53/81 (65.43%), Query Frame = 0
Query:   54 GAFFLDRDWWVFRYVLQFLRSGALPHDAALLREMHEEAAFYRLDTLRRAIAGRMESAATAQQQRHHCSSKPGGATMLETSP 134
            G F +DRDWW+FRYVL FLR G LP D  LLRE++ E+ F+++D+LR+AI  +       +Q+    ++    AT+L T+P
Sbjct:  185 GCFRVDRDWWLFRYVLHFLRDGLLPPDPKLLRELYIESEFWKIDSLRKAIEMKNMELLQIKQESDAKAAAXXXATLLSTTP 265          
BLAST of jgi.p|Trimin1|346468 vs. uniprot
Match: A0A7S3MDK2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MDK2_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.260e-11
Identity = 29/58 (50.00%), Postives = 44/58 (75.86%), Query Frame = 0
Query:   46 PLENDPASGAFFLDRDWWVFRYVLQFLRSGALPHDAALLREMHEEAAFYRLDTLRRAI 103
            P+      G F+ DRDWW+FR++L FLRS ALP++   L+E++ EA++YRL++L+RAI
Sbjct:   96 PIVEPGTDGVFYFDRDWWLFRHILAFLRSSALPNELETLKELYVEASYYRLESLQRAI 153          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|346468 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZG58_9STRA3.600e-163100.00BTB_2 domain-containing protein n=1 Tax=Tribonema ... [more]
A0A835ZHY9_9STRA7.040e-6868.18BTB/POZ protein n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A7S3UWV8_HETAK1.810e-1774.55Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S2FDC8_9STRA1.160e-1548.39Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2S0D9_9STRA2.640e-1363.46Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A482SJR7_9ARCH2.910e-1250.00BTB domain-containing protein n=1 Tax=archaeon Tax... [more]
A0A2D4BYU4_PYTIN4.970e-1241.41BTB_2 domain-containing protein n=1 Tax=Pythium in... [more]
A0A2D4BZS6_PYTIN7.040e-1241.41BTB_2 domain-containing protein n=1 Tax=Pythium in... [more]
A0A8K1CRI1_PYTOL9.870e-1244.44Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S3MDK2_9STRA1.260e-1150.00Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011333SKP1/BTB/POZ domain superfamilyGENE3D3.30.710.10Potassium Channel Kv1.1; Chain Acoord: 16..113
e-value: 2.1E-13
score: 52.3
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 47..106
IPR003131Potassium channel tetramerisation-type BTB domainPFAMPF02214BTB_2coord: 50..99
e-value: 2.7E-8
score: 34.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 165..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_1contigContig_1:2293447..2296573 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|346468mRNA_1220Tribonema minus UTEX_B_3156 mRNAContig_1 2293447..2296573 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|346468|estExt_Genemark1.C_Ctg_10311 ID=Trimin1|346468|estExt_Genemark1.C_Ctg_10311|Name=jgi.p|Trimin1|346468|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=261bp
MSNACASPDNTRTPTAATAALLRAAAASGGCLLAALCRGGGGGAAPLEND
PASGAFFLDRDWWVFRYVLQFLRSGALPHDAALLREMHEEAAFYRLDTLR
RAIAGRMESAATAQQQRHHCSSKPGGATMLETSPIRAYGGPSWATTQRGD
AHYLDDYGRSGGAVGGGHWRDGGSGGAELRTQARTPLPDPPSLLPQSSIP
CHQCRLCLSAAAATAPPFFAPPAPLRDSDVTVPTLHAGSLTDERFSHAAS
TMIASFTADV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011333SKP1/BTB/POZ_sf
IPR003131T1-type_BTB