Trimin1|346426|estExt_Genemark1.C_Ctg_10219 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|346426
Unique NameTrimin1|346426|estExt_Genemark1.C_Ctg_10219
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length614
Homology
BLAST of jgi.p|Trimin1|346426 vs. uniprot
Match: A0A835ZL91_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL91_9STRA)

HSP 1 Score: 1095 bits (2832), Expect = 0.000e+0
Identity = 613/613 (100.00%), Postives = 613/613 (100.00%), Query Frame = 0
Query:    1 MRILALAALLLGRRLDDTEVAARNVTRPTWQVLDDTLSDFFGGAEVVQMYHLGAIDTLYEQGGLNHALNFRLTALAFKSMETESSQVVLCYQPSNMTISLVPIISDDGLSVTWSHLGASAVYTKDIDXXXXXXXXXXXXXXXXXXXXXXXXXYWSSASYLASTTGSMFSAAVQLAAKYHQENPHYQPFSVYQKYPGRQLVAASSCDEFVWVLVEAANSKGVQVTPSILPKKIKIIVYADNKPVLIDIDDPSDGGGAAPRLEAVSYYRNLVIRLHPGDXXXXXXXXXXXXXXXXGVCLQTRKYSFITSLSDFAKYFDCLSSVAYIGLDQYRYLRINLTSSVMDHVVAPAVLPDIKRNRPSWIDIALITAILMGMTAGCQAALWRAEIPQHIRKRKWQRSARTSQDLSPEPPDIELLDMEGRESPDYSAELGEPPRAHRWEGVGAGEGDRGHVRGRTTGSFCAEEGARGGAADSPTAPDTPPGMRDTLSEPCPQRSGSLPLVPQPLFFWGGVTSALTVNEEDLDYYSDARPPWGRQETPKRLRSAGGLVPRAVDHYPWYLIIAQGXXXXXXXXXXXXXXVVQPARRHARGGSKLPHSPAHKSRLSRAETLREPPR 613
            MRILALAALLLGRRLDDTEVAARNVTRPTWQVLDDTLSDFFGGAEVVQMYHLGAIDTLYEQGGLNHALNFRLTALAFKSMETESSQVVLCYQPSNMTISLVPIISDDGLSVTWSHLGASAVYTKDIDXXXXXXXXXXXXXXXXXXXXXXXXXYWSSASYLASTTGSMFSAAVQLAAKYHQENPHYQPFSVYQKYPGRQLVAASSCDEFVWVLVEAANSKGVQVTPSILPKKIKIIVYADNKPVLIDIDDPSDGGGAAPRLEAVSYYRNLVIRLHPGDXXXXXXXXXXXXXXXXGVCLQTRKYSFITSLSDFAKYFDCLSSVAYIGLDQYRYLRINLTSSVMDHVVAPAVLPDIKRNRPSWIDIALITAILMGMTAGCQAALWRAEIPQHIRKRKWQRSARTSQDLSPEPPDIELLDMEGRESPDYSAELGEPPRAHRWEGVGAGEGDRGHVRGRTTGSFCAEEGARGGAADSPTAPDTPPGMRDTLSEPCPQRSGSLPLVPQPLFFWGGVTSALTVNEEDLDYYSDARPPWGRQETPKRLRSAGGLVPRAVDHYPWYLIIAQGXXXXXXXXXXXXXXVVQPARRHARGGSKLPHSPAHKSRLSRAETLREPPR
Sbjct:    1 MRILALAALLLGRRLDDTEVAARNVTRPTWQVLDDTLSDFFGGAEVVQMYHLGAIDTLYEQGGLNHALNFRLTALAFKSMETESSQVVLCYQPSNMTISLVPIISDDGLSVTWSHLGASAVYTKDIDXXXXXXXXXXXXXXXXXXXXXXXXXYWSSASYLASTTGSMFSAAVQLAAKYHQENPHYQPFSVYQKYPGRQLVAASSCDEFVWVLVEAANSKGVQVTPSILPKKIKIIVYADNKPVLIDIDDPSDGGGAAPRLEAVSYYRNLVIRLHPGDXXXXXXXXXXXXXXXXGVCLQTRKYSFITSLSDFAKYFDCLSSVAYIGLDQYRYLRINLTSSVMDHVVAPAVLPDIKRNRPSWIDIALITAILMGMTAGCQAALWRAEIPQHIRKRKWQRSARTSQDLSPEPPDIELLDMEGRESPDYSAELGEPPRAHRWEGVGAGEGDRGHVRGRTTGSFCAEEGARGGAADSPTAPDTPPGMRDTLSEPCPQRSGSLPLVPQPLFFWGGVTSALTVNEEDLDYYSDARPPWGRQETPKRLRSAGGLVPRAVDHYPWYLIIAQGXXXXXXXXXXXXXXVVQPARRHARGGSKLPHSPAHKSRLSRAETLREPPR 613          
BLAST of jgi.p|Trimin1|346426 vs. uniprot
Match: A0A6H5KI22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI22_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 8.140e-63
Identity = 157/543 (28.91%), Postives = 225/543 (41.44%), Query Frame = 0
Query:   27 RPTWQVLDD----TLSDFFGGAEVVQMYHLGAIDTLYEQGGLNHALNFRLTALAFKSMETESSQVVLCYQPSNMTISLVPIISDDGLSVTWSHLGASAVYTKDIDXXXXXXXXXXXXXXXXXXXXXXXXXYWSSASYLASTTGSMFSAAVQLAAKYHQENPHYQPFSVYQKYPGRQLVAASSCDEFVWVLVEAANSKGVQVTPSILPKKIKIIVYADNKPVLI---------------DIDDPSDGGG------------------------------------------AAPRLE------------------------AVSYYRN----------------------------------LVIRLHPGDXXXXXXXXXXXXXXXXG-----------------------------------------------------------VCLQTRKYSFITSLSDFAKYFDCLSSVAYIGLDQYRYLRINLTSSVMDHVVAPAVLPDIKRNRPSW--IDIALITAILMGMTAGCQAALWRAEIPQH 389
            RP W+ LDD    T+   F  +EV+QMYHL A   LYEQGGLNH ++F LT +A+ S+E    +V + Y P+NMTISL+P+IS+DG  + W H  AS  Y   ++                         YW++ SY+  TTG+ FS AV+ + +YH+ +P YQPFSVY+ YPGR+ + AS CDEFVW L+ AA ++GV++ P++LP+K KI++Y+ +KP +I               D D+P +GG                                           AAP  E                        +V   RN                                   ++   PG                 G                                                           +CLQ RK+SF+TSL DF +YFDCL  VA+I +  + Y ++N+TS+ +DH+  P  LP++KR   S+  +D AL   ILM +  G    LW+A + QH
Sbjct:   19 RPDWKSLDDASGATVGAVFRSSEVLQMYHLQATAELYEQGGLNHDMSFFLTGVAYYSVERPDVKVSIAYHPTNMTISLLPVISEDGRELRWDHQAASVSYVMGVEQA-----------------------YWNAGSYMGETTGAFFSYAVEFSLEYHRLHPRYQPFSVYEDYPGREFLTASGCDEFVWALLSAAQTRGVRLIPALLPQKHKIVIYSHSKPEIIVFSGDGSSASGGGNGDADEPVEGGAVPGEAGXXXXXXXXXXXXXXXXEVGXXXXXXXXXXXXXXXSDAAPVREEEEGHASGXXXXXXXXXXXXXXXPSVDETRNNSSVSSSTGQEGQEEDGNGSSAGGEERQRLLRGRTLLWGSPGSDSAGNAGEAGALDREAGEVEDEGTEEPGVTGVDEAEATGAPLSTVSPMEAAVQTRAPAAEPTDEWQEVVGYYQSLQLCLQERKFSFVTSLKDFVRYFDCLDDVAFIAIGPHEYYKVNITSTKLDHISLPEELPEVKRRYESFTGVDTALAVWILMIIACGIHGVLWQAAVIQH 538          
BLAST of jgi.p|Trimin1|346426 vs. uniprot
Match: D7FTM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTM5_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 8.190e-60
Identity = 135/380 (35.53%), Postives = 197/380 (51.84%), Query Frame = 0
Query:   27 RPTWQVLDD----TLSDFFGGAEVVQMYHLGAIDTLYEQGGLNHALNFRLTALAFKSMETESSQVVLCYQPSNMTISLVPIISDDGLSVTWSHLGASAVYTKDIDXXXXXXXXXXXXXXXXXXXXXXXXXYWSSASYLASTTGSMFSAAVQLAAKYHQENPHYQPFSVYQKYPGR-------QLVAASSCDEFVWV----LVEAANSKGVQVTPSILPKKIKIIVYADNKPVLIDIDDPSDGGGAAPRLEAVSYYRNLVIRLHPGDXXXXXXXXXXXXXXXXGVCLQTRKYSFITSLSDFAKYFDCLSSVAYIGLDQYRYLRINLTSSVMDHVVAPAVLPDIKRNRPSW--IDIALITAILMGMTAGCQAALWRAEIPQH 389
            RP W+ LDD    T+ + F  +EV+QMYHL A   LYEQGGLNH ++F LT +AF S+E    +V + Y P+NMTISL+P+IS+DG  + W H  AS  Y   +D                         YW++ SY+  TTG+ FS AV+ + ++H+ +P YQPFSVY+ YPG           A    DE   V     V+ A + G  ++ ++ P ++ +  +A          +P+D        E V YY++L +                        CLQ RK+SF+TSL DF +YFDCL  VA+I +  + Y ++N+TS+ +DH+  P  LP++KR   S+  +D AL   ILM +  G    LW+A + QH
Sbjct:   19 RPDWKSLDDASGATVGEVFRSSEVLQMYHLQATAQLYEQGGLNHDMSFFLTGVAFYSVERPDVKVSIAYHPTNMTISLLPVISEDGRELRWDHQAASVSYVMGVDQA-----------------------YWNAGSYMGETTGAFFSYAVEFSLEHHRLHPRYQPFSVYEDYPGSAGEAGALDQEAGEPEDEGTEVPGVASVDEAEATGAPLS-TVSPTEMAVQTHAPAA-------EPTDEW-----QEVVGYYQSLQL------------------------CLQERKFSFVTSLKDFVRYFDCLDDVAFIAIGPHEYYKVNITSTKLDHISLPEELPEVKRRYESFTQVDTALAVWILMIIACGIHGVLWQAAVIQH 338          
BLAST of jgi.p|Trimin1|346426 vs. uniprot
Match: A0A7S2V1C8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1C8_9STRA)

HSP 1 Score: 107 bits (266), Expect = 4.450e-22
Identity = 82/289 (28.37%), Postives = 129/289 (44.64%), Query Frame = 0
Query:   92 QPSNMTISLVPIISD--DG---LSVTWSHLGASAVYTKDIDXXXXXXXXXXXXXXXXXXXXXXXXXYWSSASYLASTTGSMFSAAVQLAAKYHQENPHYQPFSVYQKYPGRQLVAASSCDEFVWVLVEAANSKGVQVTPSILPKKIKIIVYADNKPVLIDIDDPSDGGGAAPRLEAVSYYRNLVIRLHPGDXXXXXXXXXXXXXXXXGVCLQTRKYSFITSLSDFAKYFD-CLSSVAYIGLDQYRYLRINLTSSVMDHVVAPAVLPDIKR--NRPSWIDIALITAILMG 372
            +P ++TIS++P I +  DG    ++ W H  AS  Y  DID                          W S +Y+ +  GS F   +  A  Y  ++  YQPFSVY  YPG   + A SCDEF W L E   +  + + P ++PKK+KII+Y+  +P +  +++       A + E   Y+  ++                         CL  R    IT+LS+F  ++  CL   AYI  D    +++NLT    D+V     +P   +     +W+DI+L T I++G
Sbjct:    1 EPVDLTISMLPEIQEKEDGSQDATLVW-HNAASIYYESDIDSTV-----------------------WDSITYMGTMGGSTFRYLLDYALDYGVKHTFYQPFSVYDAYPGHLYIPAISCDEFTWKLFEKLANLQITLNPVVVPKKVKIILYSPCEPEVYALNN------TARQTEITDYFTEMM------------------------QCLNVRSLQHITTLSEFTGFYSGCLVDFAYIYHDPTTIIKVNLTIPFADNVNPTEDVPQPYQIIEGFTWVDISL-TCIILG 234          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|346426 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835ZL91_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KI22_9PHAE8.140e-6328.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTM5_ECTSI8.190e-6035.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2V1C8_9STRA4.450e-2228.37Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 599..613
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 395..495
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 413..452
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 579..613
IPR026138Ceroid-lipofuscinosis neuronal protein 5PANTHERPTHR15380CEROID-LIPOFUSCINOSIS, NEURONAL 5coord: 114..356

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_1contigContig_1:1426911..1441263 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|346426mRNA_1125Tribonema minus UTEX_B_3156 mRNAContig_1 1426439..1441263 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|346426|estExt_Genemark1.C_Ctg_10219 ID=Trimin1|346426|estExt_Genemark1.C_Ctg_10219|Name=jgi.p|Trimin1|346426|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=614bp
MRILALAALLLGRRLDDTEVAARNVTRPTWQVLDDTLSDFFGGAEVVQMY
HLGAIDTLYEQGGLNHALNFRLTALAFKSMETESSQVVLCYQPSNMTISL
VPIISDDGLSVTWSHLGASAVYTKDIDSDDGLSVTWSHLGASAAYTKDID
SDYWSSASYLASTTGSMFSAAVQLAAKYHQENPHYQPFSVYQKYPGRQLV
AASSCDEFVWVLVEAANSKGVQVTPSILPKKIKIIVYADNKPVLIDIDDP
SDGGGAAPRLEAVSYYRNLVIRLHPGDGGSSPRLEVVSYYRDLGVCLQTR
KYSFITSLSDFAKYFDCLSSVAYIGLDQYRYLRINLTSSVMDHVVAPAVL
PDIKRNRPSWIDIALITAILMGMTAGCQAALWRAEIPQHIRKRKWQRSAR
TSQDLSPEPPDIELLDMEGRESPDYSAELGEPPRAHRWEGVGAGEGDRGH
VRGRTTGSFCAEEGARGGAADSPTAPDTPPGMRDTLSEPCPQRSGSLPLV
PQPLFFWGGVTSALTVNEEDLDYYSDARPPWGRQETPKRLRSAGGLVPRA
VDHYPWYLIIAQGTPKRLRATGGLVPRVVQPARRHARGGSKLPHSPAHKS
RLSRAETLREPPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026138CLN5