Trimin1|346375|estExt_Genemark1.C_Ctg_10143 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|346375
Unique NameTrimin1|346375|estExt_Genemark1.C_Ctg_10143
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length203
Homology
[Close]
BLAST of jgi.p|Trimin1|346375 vs. uniprot
Match: A0A836CRJ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRJ9_9STRA)

HSP 1 Score: 224 bits (572), Expect = 1.410e-71
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0 
Query:    1 MAAQDDARDTVQDQVDVLPQLGDVNEGTDIQQLRAAIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLERMHLEMRRNRTRAINFQAALSNQERIYSLPDANGAWPSNFPGTYAAVCALSHGECDALLAAYELPPVEGEPLHGKVKRLSSFITVGS 202
            MAAQDDARDTVQDQVDVLPQLGDVNEGTDIQQLRAAIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLERMHLEMRRNRTRAINFQAALSNQERIYSLPDANGAWPSNFPGTYAAVCALSHGECDALLAAYELPPVEGEPLHGKVKRLSSFITVGS
Sbjct:    1 MAAQDDARDTVQDQVDVLPQLGDVNEGTDIQQLRAAIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLERMHLEMRRNRTRAINFQAALSNQERIYSLPDANGAWPSNFPGTYAAVCALSHGECDALLAAYELPPVEGEPLHGKVKRLSSFITVGS 202
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|346375 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CRJ9_9STRA1.410e-71100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 30..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_1contigContig_1:863113..863721 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|346375mRNA_1052Tribonema minus UTEX_B_3156 mRNAContig_1 863113..865116 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|346375|estExt_Genemark1.C_Ctg_10143 ID=Trimin1|346375|estExt_Genemark1.C_Ctg_10143|Name=jgi.p|Trimin1|346375|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=203bp
MAAQDDARDTVQDQVDVLPQLGDVNEGTDIQQLRAAIDQLARSVQDFQQT
QQQMQQTLQQMLQTEQQMLQTEQHMQQMLQQMQEIQQPMLQSMVTLTERM
QGVEVRLGGVDGRLERMHLEMRRNRTRAINFQAALSNQERIYSLPDANGA
WPSNFPGTYAAVCALSHGECDALLAAYELPPVEGEPLHGKVKRLSSFITV
GS*
back to top