Trimin1|346358|estExt_Genemark1.C_Ctg_10115 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|346358
Unique NameTrimin1|346358|estExt_Genemark1.C_Ctg_10115
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length375
Homology
BLAST of jgi.p|Trimin1|346358 vs. uniprot
Match: A0A836CPN9_9STRA (TB2/DP1, HVA22 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPN9_9STRA)

HSP 1 Score: 655 bits (1690), Expect = 3.690e-236
Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 0
Query:    1 MDTAKEKLDVVHKQILAAMDRHPLLTFRDSLLHWEKQSGWSRAWLLCSVASFLTMAVWVLGGVPFIAKLVAFVYPAYASFKTIDTPSSHESETWLTYWIVFAAVGIVEPIAWPLLNVIPLYQFVKMGFLVWCYNPRTRGASTIYRQVLRPYVLPAIGVVGXXXXXXXXXXXXXXXXXXXXXXXXSVAKPDDADAQAADTMPLFASEFIYTYGVITTTTSRSXXXXXXXXXXXXXXXXAAAEQEVSVRVLSAAGLPLMEAGATDAYVLLYVMGADGKTVSDKCKTKTKPNSTEPRWGEELSLRVRASDVAPGACVVAIVCHKTGFGQDLTIGTVQVPLTSLAGGEEMQGDFALEDKAKDNPVGVSGKLSLALRLQ 374
            MDTAKEKLDVVHKQILAAMDRHPLLTFRDSLLHWEKQSGWSRAWLLCSVASFLTMAVWVLGGVPFIAKLVAFVYPAYASFKTIDTPSSHESETWLTYWIVFAAVGIVEPIAWPLLNVIPLYQFVKMGFLVWCYNPRTRGASTIYRQVLRPYVLPAIGVVGXXXXXXXXXXXXXXXXXXXXXXXXSVAKPDDADAQAADTMPLFASEFIYTYGVITTTTSRSXXXXXXXXXXXXXXXXAAAEQEVSVRVLSAAGLPLMEAGATDAYVLLYVMGADGKTVSDKCKTKTKPNSTEPRWGEELSLRVRASDVAPGACVVAIVCHKTGFGQDLTIGTVQVPLTSLAGGEEMQGDFALEDKAKDNPVGVSGKLSLALRLQ
Sbjct:    1 MDTAKEKLDVVHKQILAAMDRHPLLTFRDSLLHWEKQSGWSRAWLLCSVASFLTMAVWVLGGVPFIAKLVAFVYPAYASFKTIDTPSSHESETWLTYWIVFAAVGIVEPIAWPLLNVIPLYQFVKMGFLVWCYNPRTRGASTIYRQVLRPYVLPAIGVVGXXXXXXXXXXXXXXXXXXXXXXXXSVAKPDDADAQAADTMPLFASEFIYTYGVITTTTSRSXXXXXXXXXXXXXXXXAAAEQEVSVRVLSAAGLPLMEAGATDAYVLLYVMGADGKTVSDKCKTKTKPNSTEPRWGEELSLRVRASDVAPGACVVAIVCHKTGFGQDLTIGTVQVPLTSLAGGEEMQGDFALEDKAKDNPVGVSGKLSLALRLQ 374          
BLAST of jgi.p|Trimin1|346358 vs. uniprot
Match: A0A7S2UZD4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZD4_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.710e-34
Identity = 104/377 (27.59%), Postives = 163/377 (43.24%), Query Frame = 0
Query:    5 KEKLDVVHKQILAAMDRHPLLTFRDSLLHWEKQSGWSRAWLLCSVASFLTMAVWVLGGVPFIAKLVAFVYPAYASFKTIDTPSSHESETWLTYWIVFAAVGIVEPIAWPLLNVIPLYQFVKMGFLVWCYNPRTRGASTIYRQVLRPYVLPAIGVVGXXXXXXXXXXXXXXXXXXXXXXXXSVAKPDDADAQAADTMPLFASEFIYTYGVITTTTSRSXXXXXXXXXXXXXXXXAAAEQEVSVRVLSAAGLPLME--AGATDAYVLLYVMGADGKTVSDK------CKTKTKPNSTEPRWGEELSLRVRASDVAPGACVVAIVCHKTGFGQDLTIGTVQVPLTSLAGGEEMQGDFALEDKAKDNPVGVSGKLSLALRL 373
            K  + ++ K++   MDR+P   F   +  +EK  G+S+A++  +    L +  +V  G  F+  ++A++YPA AS++ I  PS      WLTYW++F    + E     L++ IPLY F+++GFL+WCY+P+T GAS +Y    RP++L  +                            S A P              A E        T +                          ++V V++A  LP+ME  +G +D Y LL +    G+  + +       KT  KP +  P W E + L+   S    G  VV ++  K   G D  IG V+V L+SL      +    L D    N  GVSG++ L L L
Sbjct:    7 KSDIKLMTKKVEQWMDRNPKFCFNAQMKDFEKMVGFSKAYIFSASVIILMLIAYVFFGKTFMGDIIAYLYPALASWRAIKQPSPDNRRQWLTYWVIFGMCSLCEKFLHFLVSWIPLYFFIRLGFLIWCYHPKTLGASVVYGAT-RPHLLQLLPA--------------------------STAAPSTKAKAGGAKKSGGAGEAAPAPSASTVSAGT-----------------------LNVTVVAAENLPVMELFSGTSDPYCLLRMDPPAGEKRAPRGVEKISYKTTCKPKTLSPSWNERIVLKPLES--LDGKLVVTVM-DKQSVGMDDFIGKVEVKLSSLPKNSVEEAWLTLTDPENMNEKGVSGEIHLKLEL 330          
BLAST of jgi.p|Trimin1|346358 vs. uniprot
Match: A0A1Z5K1S1_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K1S1_FISSO)

HSP 1 Score: 129 bits (324), Expect = 1.310e-32
Identity = 59/136 (43.38%), Postives = 87/136 (63.97%), Query Frame = 0
Query:   19 MDRHPLLTFRDSLLHWEKQSGWSRAWLLCSVASFLTMAVWVLGGVPFIAKLVAFVYPAYASFKTIDTPSSHESETWLTYWIVFAAVGIVEPIAWPLLNVIPLYQFVKMGFLVWCYNPRTRGASTIYRQVLRPYVLP 154
            MD+HP  T  D L   E+++G+ + +   + A     A+W+LGGV  +  L+ FVYPAY SFK++D+  SH+   WLTYW+VF+ + IVE +   ++  IP Y ++KMG +VW Y P TRGA  +Y+Q LRP + P
Sbjct:   21 MDKHPTTTMNDKLQDLEQKTGYHKVYFFVTGAVASLSALWLLGGVKLLVDLLGFVYPAYMSFKSMDS-GSHDDTQWLTYWVVFSFLSIVENLLSVIVTAIPFYFWIKMGIIVWMYAPSTRGAEVMYQQGLRPLLAP 155          
BLAST of jgi.p|Trimin1|346358 vs. uniprot
Match: A0A7S1B895_9STRA (Hypothetical protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B895_9STRA)

HSP 1 Score: 129 bits (323), Expect = 3.090e-32
Identity = 60/152 (39.47%), Postives = 92/152 (60.53%), Query Frame = 0
Query:    3 TAKEKLDVVHKQILAAMDRHPLLTFRDSLLHWEKQSGWSRAWLLCSVASFLTMAVWVLGGVPFIAKLVAFVYPAYASFKTIDTPSSHESETWLTYWIVFAAVGIVEPIAWPLLNVIPLYQFVKMGFLVWCYNPRTRGASTIYRQVLRPYVLP 154
            TA E L+     +   M++HP +   +     E ++G+S+ + L       T+ +  +GG  FI+ L+ FVYPAY SFK ID+ ++ E   WLTYW+VFA+  I+E  A  L++ IP Y F+K+ FL+W Y+P   GA  +Y+QVLRP ++P
Sbjct:   12 TAMETLNAALTNVDTLMEKHPSVFQYEKFKKLENKTGYSKVFFLFGAVVAGTLFLIAMGGTQFISDLIGFVYPAYCSFKAIDSANTEEDVQWLTYWVVFASFSIIESAASFLVSWIPFYFFIKLSFLIWLYHPTFLGAQLVYKQVLRPLIIP 163          
BLAST of jgi.p|Trimin1|346358 vs. uniprot
Match: A0A485KPL0_9STRA (Aste57867_9847 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPL0_9STRA)

HSP 1 Score: 128 bits (321), Expect = 5.100e-32
Identity = 57/147 (38.78%), Postives = 96/147 (65.31%), Query Frame = 0
Query:    6 EKLDVVHKQILAAMDRHPLLTFRDSLLHWEKQSGWSRAWLLCSVASFLTMAVWVLGGVPFIAKLVAFVYPAYASFKTIDTPSSHESETWLTYWIVFAAVGIVEPIAWPLLNVIPLYQFVKMGFLVWCYNPRTRGASTIYRQVLRPYV 152
            E++++  ++I   ++R+      + L   EKQ+G  + ++ C  A  + + ++V+GG   I+ LV FVYPAY SFK ++T ++ +   WLTYW+V++A  + E I   LL  +P+Y F+K+GFLVWCY+P T GA+TIY  +++PY+
Sbjct:    2 EQINIYREKINQRLERY------EQLKELEKQTGVDKFYIFCGAAVIVGILLFVVGGAHLISNLVGFVYPAYMSFKALNTDTAGDDTQWLTYWVVYSAFNLTEQITDTLLFWVPMYFFIKIGFLVWCYHPSTLGATTIYENLIKPYL 142          
BLAST of jgi.p|Trimin1|346358 vs. uniprot
Match: A0A7S2S481_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S481_9STRA)

HSP 1 Score: 126 bits (316), Expect = 2.380e-31
Identity = 57/158 (36.08%), Postives = 94/158 (59.49%), Query Frame = 0
Query:    3 TAKEKLDVVHKQILAAMDRHPLLTFRDSLLHWEKQSGWSRAWLLCSVASFLTMAVWVLGGVPFIAKLVAFVYPAYASFKTIDTPSSHESETWLTYWIVFAAVGIVEPIAWPLLNVIPLYQFVKMGFLVWCYNPRTRGASTIYRQVLRPYVLPAIGVVG 160
            TA  ++    K++   + ++P L   +   + EK++G+S+ +   +        ++VLGG   I+ LV+F+YPAY SFK +D+    +   WLTYW+VFA V I+E  A   +  IP+Y F K+GF +WCY+P+  GA  IY QV++P+++P +   G
Sbjct:    2 TASSEVATTIKKVDVFLSKYPNLFQYEKFKNIEKKTGYSKVYFFGTFVCLFGGLLYVLGGSKLISDLVSFIYPAYMSFKAVDSADPTDDTQWLTYWVVFAFVSIIESCASFFIEYIPMYFFFKLGFFIWCYHPKFLGAGLIYTQVIKPFLVPYVKAFG 159          
BLAST of jgi.p|Trimin1|346358 vs. uniprot
Match: A0A0P1AVA6_PLAHL (Protein involved in membrane traffic (YOP1/TB2/DP1/HVA22 family) n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AVA6_PLAHL)

HSP 1 Score: 125 bits (313), Expect = 6.900e-31
Identity = 59/152 (38.82%), Postives = 94/152 (61.84%), Query Frame = 0
Query:    6 EKLDVVHKQILAAMDRHPLLTFRDSLLHWEKQSGWSRAWLLCSVASFLTMAVWVLGGVPFIAKLVAFVYPAYASFKTIDTPSSHESETWLTYWIVFAAVGIVEPIAWPLLNVIPLYQFVKMGFLVWCYNPRTRGASTIYRQVLRPYVLPAIG 157
            +K+    ++I A ++R+      D ++  EKQ+G  + ++ C  A  L + ++V GG   +  LV F+YPAY SFK I+TP + +   WLTYW+V+A   + E +   +L+ IP Y F+K+GFLVW Y+P T+G+  IY  V++PYV P +G
Sbjct:    2 DKVMEYKEKISAKLERY------DKIVELEKQTGVDKFYIFCVGALLLGIVLFVAGGEQLVVGLVGFIYPAYMSFKAINTPGTGDDTQWLTYWVVYAFFNLTESVTDLVLSWIPFYFFLKIGFLVWNYHPSTQGSKLIYNTVIKPYVAPHVG 147          
BLAST of jgi.p|Trimin1|346358 vs. uniprot
Match: A0A7S2UQE6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UQE6_9STRA)

HSP 1 Score: 124 bits (311), Expect = 1.350e-30
Identity = 56/144 (38.89%), Postives = 88/144 (61.11%), Query Frame = 0
Query:   17 AAMDRHPLLTFRDSLLHWEKQSGWSRAWLLCSVASFLTMAVWVLGGVPFIAKLVAFVYPAYASFKTIDTPSSHESETWLTYWIVFAAVGIVEPIAWPLLNVIPLYQFVKMGFLVWCYNPRTRGASTIYRQVLRPYVLPAIGVVG 160
            A + ++P L   D L   E + G+S+ +   + A   + A+  LGG+ FI+ L+AF+YPAY SFK ID+P   +   WLTYW+VF+   I+E      ++ IP Y F+K+GF +W Y+P+  GA  +Y QVL+P ++P +  +G
Sbjct:   19 AFLAKYPNLLQYDKLQQLEDKVGYSKVFFAAAFALVFSSAILALGGLKFISDLIAFLYPAYMSFKAIDSPDPSKDTQWLTYWVVFSFFSIIETTCSFFISWIPFYFFIKLGFFLWLYHPQFLGAEVLYNQVLKPCLIPYLNTIG 162          
BLAST of jgi.p|Trimin1|346358 vs. uniprot
Match: A0A024UR48_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UR48_9STRA)

HSP 1 Score: 123 bits (308), Expect = 4.500e-30
Identity = 57/145 (39.31%), Postives = 93/145 (64.14%), Query Frame = 0
Query:    6 EKLDVVHKQILAAMDRHPLLTFRDSLLHWEKQSGWSRAWLLCSVASFLTMAVWVLGGVPFIAKLVAFVYPAYASFKTIDTPSSHESETWLTYWIVFAAVGIVEPIAWPLLNVIPLYQFVKMGFLVWCYNPRTRGASTIYRQVLRP 150
            E+++V   +I A ++R+      + L   EKQ+G  + ++  ++A    + ++V+GG   I+ LV FVYPAY SFK ++T +S +   WLTYW+V++A  + E I   LL  +P+Y F+K+ FLVWCY+P T GA+TIY  +++P
Sbjct:    2 EQINVYRAKITARLERY------EQLKELEKQTGVDKFYIFVAIALLAGVLLFVVGGAHLISNLVGFVYPAYMSFKALNTETSGDDTQWLTYWVVYSAFNLTEQITDTLLFWVPMYFFIKIAFLVWCYHPSTLGATTIYESLIKP 140          
BLAST of jgi.p|Trimin1|346358 vs. uniprot
Match: A0A024G6C0_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G6C0_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.090e-29
Identity = 51/122 (41.80%), Postives = 81/122 (66.39%), Query Frame = 0
Query:   35 EKQSGWSRAWLLCSVASFLTMAVWVLGGVPFIAKLVAFVYPAYASFKTIDTPSSHESETWLTYWIVFAAVGIVEPIAWPLLNVIPLYQFVKMGFLVWCYNPRTRGASTIYRQVLRPYVLPAI 156
            EK++G  + ++  ++++     ++ +GG P + KLV FVYP+Y SF+  D  SS  S+ WL YWIV+A   ++EP+   + + +P+Y FVK+GFLVWC+ P T GA  IY+ V++PY+ P I
Sbjct:   25 EKKTGIDKFYIFVTISTIALALLYAIGGQPLMVKLVGFVYPSYQSFRAADKVSSTSSKVWLAYWIVYAVFCLIEPVLDYVFSSLPMYFFVKVGFLVWCFLPSTMGAQVIYQAVMKPYIAPYI 146          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|346358 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CPN9_9STRA3.690e-236100.00TB2/DP1, HVA22 family-domain-containing protein n=... [more]
A0A7S2UZD4_9STRA1.710e-3427.59Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1Z5K1S1_FISSO1.310e-3243.38Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S1B895_9STRA3.090e-3239.47Hypothetical protein n=3 Tax=Corethron hystrix Tax... [more]
A0A485KPL0_9STRA5.100e-3238.78Aste57867_9847 protein n=1 Tax=Aphanomyces stellat... [more]
A0A7S2S481_9STRA2.380e-3136.08Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A0P1AVA6_PLAHL6.900e-3138.82Protein involved in membrane traffic (YOP1/TB2/DP1... [more]
A0A7S2UQE6_9STRA1.350e-3038.89Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A024UR48_9STRA4.500e-3039.31Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A024G6C0_9STRA1.090e-2941.80Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainSMARTSM00239C2_3ccoord: 243..349
e-value: 4.7E-10
score: 49.4
IPR000008C2 domainPFAMPF00168C2coord: 243..351
e-value: 5.2E-12
score: 46.0
IPR000008C2 domainPROSITEPS50004C2coord: 220..350
score: 14.483866
IPR004345TB2/DP1/HVA22-related proteinPFAMPF03134TB2_DP1_HVA22coord: 75..151
e-value: 4.0E-24
score: 84.4
IPR004345TB2/DP1/HVA22-related proteinPANTHERPTHR12300HVA22-LIKE PROTEINScoord: 58..178
IPR035892C2 domain superfamilyGENE3D2.60.40.150C2 domaincoord: 238..374
e-value: 5.6E-18
score: 67.4
IPR035892C2 domain superfamilySUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 241..355
NoneNo IPR availablePIRSRPIRSR000550-2PIRSR000550-2coord: 238..309
e-value: 1.3E-4
score: 18.4
NoneNo IPR availablePANTHERPTHR12300:SF22LP05237P-RELATEDcoord: 58..178
NoneNo IPR availableCDDcd00030C2coord: 244..345
e-value: 4.80306E-12
score: 60.1583

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_1contigContig_1:607128..611853 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|346358mRNA_1018Tribonema minus UTEX_B_3156 mRNAContig_1 607128..612034 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|346358|estExt_Genemark1.C_Ctg_10115 ID=Trimin1|346358|estExt_Genemark1.C_Ctg_10115|Name=jgi.p|Trimin1|346358|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=375bp
MDTAKEKLDVVHKQILAAMDRHPLLTFRDSLLHWEKQSGWSRAWLLCSVA
SFLTMAVWVLGGVPFIAKLVAFVYPAYASFKTIDTPSSHESETWLTYWIV
FAAVGIVEPIAWPLLNVIPLYQFVKMGFLVWCYNPRTRGASTIYRQVLRP
YVLPAIGVVGGGGGGAATKSTTTSRSAAAAAAAASVAKPDDADAQAADTM
PLFASEFIYTYGVITTTTSRSAASASVVEPDDADAQAAAAEQEVSVRVLS
AAGLPLMEAGATDAYVLLYVMGADGKTVSDKCKTKTKPNSTEPRWGEELS
LRVRASDVAPGACVVAIVCHKTGFGQDLTIGTVQVPLTSLAGGEEMQGDF
ALEDKAKDNPVGVSGKLSLALRLQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR004345TB2_DP1_HVA22
IPR035892C2_domain_sf