Trimin1|346324|estExt_Genemark1.C_Ctg_10066 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|346324
Unique NameTrimin1|346324|estExt_Genemark1.C_Ctg_10066
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1640
Homology
BLAST of jgi.p|Trimin1|346324 vs. uniprot
Match: A0A835ZEC8_9STRA (C3H1-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEC8_9STRA)

HSP 1 Score: 2833 bits (7344), Expect = 0.000e+0
Identity = 1639/1639 (100.00%), Postives = 1639/1639 (100.00%), Query Frame = 0
Query:    1 MQLEDRSLLLSVLQISRKQTACLAAFVEYGGLRVLRHWVFSWFNKKDLDKTAKAYLTELLLQVCTRLPVNFTALLQSRVSTIFKLISNESYLGSDNIKALCKELKKEWKTSGARTEPQHAAQYMQIKAYLDTKARLRDEAAKQEAEXXXXXXXXXXXXXXXXXXXXALKRAPSLTIAAPSANAKAEERSAKSTSTLKSSGGDTPGAXXXXXXGAARPGFKRQLSDSSKLLDVGPLQPGGVARPRKQNKIQLIDATQVKAKQQGGVVTGEASVKRAPDADAXXXXEMADAQAVTRGETAAAEPGKKKSILKVPKKEEAVAAAPAVSVITGKAPKPITSKVSLAVMGAVAXXXXXXXXXXXXXXRMLAFGDDKKRAGKAHVFTIKWADQVQKSLREVKEFKMDDESMKVMQTATAHELHHHEPRAWRDMVKKERLNERESLQQSRLKPVDAEAASEGKENAVMTPQIPWATPRPLPKRLNADGVEADDTIESTELEAQQLRCRGVMTAGLSVPVAVPDPMGAQHLYRDLLLPNMATMVAHWLSDCKQRSAEELLVRPAAALDQQRRLARAAAWVSAPASGTVAAAAXHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDSLKARQLRTPRQRHRAQALVVVVAEDDGDGGQRLAQPQEVFYISAADIPDTPSEVGTVIVPFNPNKPLKQIQWLAEDERDSNIDLAQQAGAPEAPIAPPALQQRPDAFGGPAAYPPQHPPAPMYGHQDPHAPQQQRYGEAPFGDQQPPPFGAPPQFPPYGQQGPXXXXDARGGPGGPRPGGFEGPXXGRQAPPFRHGGGVEGXXXXXXXXXXXXXXXXXAGXXXXXXXXXXXXXXXXXXXXGPIHPTHAREGAPPCAFWGHNVRTCRKGEICDFVHDDNNTNLTVPGGXXXXXXXXGDMGXXXXXXXXXXXXXXXXXFSSRGGRATXXXRGGSVILEEYRKQQLTERIKDLVTPSTGLNEDGEPCAKFNGFVYLGGGRKADGNYVLSVAHALDSAAVAYRAVVKGKTVDLIEIKRSPHVDAVVFRCQQPLPALTAPIPYSGGQVGNHAFMLTRRGDAEHERQLIRGVITSLKSHGTAAMVTDARDAGAPIFTPNGYFIGLMLGRSCVDNGDAAFVPAEDLYAFLWMAESVPQLPMLKDEICDFVRDDNNTNLTVPGGGRGRAGAGGTWAGGSLGLGEYRKQQLTERIKDLVTPSTGLNKDGEPCAKFNGFVYLGGGQKADGNVLSVAHALDSAAVAYRAVVKGKTVDLIEIKRSPRADAVLFRCKEPLPALTAPIPPSEGIVGRLAFMLTRRGDAEHEHELIEGTITSLKRHGTTLMVTDARDAGAPIFTPNGYFIGLMLGRSCVDNGDAAFVPAEDLYAFLWMAESVPQLPESKQXXXXXXXXXLQPQHTGAMEPVAVISAPPSSHGNLEEFHQQQLTERIKDLVTPITGYDKDGKPCAKFNGFLYLGGGQKADGNYVLSVAHALDSAAVAYRAVVKGKTVDLIEIKRSPRADAVVFRCKEPLPALTAPIPPSEGKVGRLAFMLTRRGDAEHEHELIKGTITSLKRHGTTLMVTDARDAGAPIFTPNCYFIGLMLGRSCVDNGDAEFVTAGPLCAFLWMAESVPQLPESKVRDTN 1639
            MQLEDRSLLLSVLQISRKQTACLAAFVEYGGLRVLRHWVFSWFNKKDLDKTAKAYLTELLLQVCTRLPVNFTALLQSRVSTIFKLISNESYLGSDNIKALCKELKKEWKTSGARTEPQHAAQYMQIKAYLDTKARLRDEAAKQEAEXXXXXXXXXXXXXXXXXXXXALKRAPSLTIAAPSANAKAEERSAKSTSTLKSSGGDTPGAXXXXXXGAARPGFKRQLSDSSKLLDVGPLQPGGVARPRKQNKIQLIDATQVKAKQQGGVVTGEASVKRAPDADAXXXXEMADAQAVTRGETAAAEPGKKKSILKVPKKEEAVAAAPAVSVITGKAPKPITSKVSLAVMGAVAXXXXXXXXXXXXXXRMLAFGDDKKRAGKAHVFTIKWADQVQKSLREVKEFKMDDESMKVMQTATAHELHHHEPRAWRDMVKKERLNERESLQQSRLKPVDAEAASEGKENAVMTPQIPWATPRPLPKRLNADGVEADDTIESTELEAQQLRCRGVMTAGLSVPVAVPDPMGAQHLYRDLLLPNMATMVAHWLSDCKQRSAEELLVRPAAALDQQRRLARAAAWVSAPASGTVAAAAXHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDSLKARQLRTPRQRHRAQALVVVVAEDDGDGGQRLAQPQEVFYISAADIPDTPSEVGTVIVPFNPNKPLKQIQWLAEDERDSNIDLAQQAGAPEAPIAPPALQQRPDAFGGPAAYPPQHPPAPMYGHQDPHAPQQQRYGEAPFGDQQPPPFGAPPQFPPYGQQGPXXXXDARGGPGGPRPGGFEGPXXGRQAPPFRHGGGVEGXXXXXXXXXXXXXXXXXAGXXXXXXXXXXXXXXXXXXXXGPIHPTHAREGAPPCAFWGHNVRTCRKGEICDFVHDDNNTNLTVPGGXXXXXXXXGDMGXXXXXXXXXXXXXXXXXFSSRGGRATXXXRGGSVILEEYRKQQLTERIKDLVTPSTGLNEDGEPCAKFNGFVYLGGGRKADGNYVLSVAHALDSAAVAYRAVVKGKTVDLIEIKRSPHVDAVVFRCQQPLPALTAPIPYSGGQVGNHAFMLTRRGDAEHERQLIRGVITSLKSHGTAAMVTDARDAGAPIFTPNGYFIGLMLGRSCVDNGDAAFVPAEDLYAFLWMAESVPQLPMLKDEICDFVRDDNNTNLTVPGGGRGRAGAGGTWAGGSLGLGEYRKQQLTERIKDLVTPSTGLNKDGEPCAKFNGFVYLGGGQKADGNVLSVAHALDSAAVAYRAVVKGKTVDLIEIKRSPRADAVLFRCKEPLPALTAPIPPSEGIVGRLAFMLTRRGDAEHEHELIEGTITSLKRHGTTLMVTDARDAGAPIFTPNGYFIGLMLGRSCVDNGDAAFVPAEDLYAFLWMAESVPQLPESKQXXXXXXXXXLQPQHTGAMEPVAVISAPPSSHGNLEEFHQQQLTERIKDLVTPITGYDKDGKPCAKFNGFLYLGGGQKADGNYVLSVAHALDSAAVAYRAVVKGKTVDLIEIKRSPRADAVVFRCKEPLPALTAPIPPSEGKVGRLAFMLTRRGDAEHEHELIKGTITSLKRHGTTLMVTDARDAGAPIFTPNCYFIGLMLGRSCVDNGDAEFVTAGPLCAFLWMAESVPQLPESKVRDTN
Sbjct:    1 MQLEDRSLLLSVLQISRKQTACLAAFVEYGGLRVLRHWVFSWFNKKDLDKTAKAYLTELLLQVCTRLPVNFTALLQSRVSTIFKLISNESYLGSDNIKALCKELKKEWKTSGARTEPQHAAQYMQIKAYLDTKARLRDEAAKQEAEXXXXXXXXXXXXXXXXXXXXALKRAPSLTIAAPSANAKAEERSAKSTSTLKSSGGDTPGAXXXXXXGAARPGFKRQLSDSSKLLDVGPLQPGGVARPRKQNKIQLIDATQVKAKQQGGVVTGEASVKRAPDADAXXXXEMADAQAVTRGETAAAEPGKKKSILKVPKKEEAVAAAPAVSVITGKAPKPITSKVSLAVMGAVAXXXXXXXXXXXXXXRMLAFGDDKKRAGKAHVFTIKWADQVQKSLREVKEFKMDDESMKVMQTATAHELHHHEPRAWRDMVKKERLNERESLQQSRLKPVDAEAASEGKENAVMTPQIPWATPRPLPKRLNADGVEADDTIESTELEAQQLRCRGVMTAGLSVPVAVPDPMGAQHLYRDLLLPNMATMVAHWLSDCKQRSAEELLVRPAAALDQQRRLARAAAWVSAPASGTVAAAAXHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDSLKARQLRTPRQRHRAQALVVVVAEDDGDGGQRLAQPQEVFYISAADIPDTPSEVGTVIVPFNPNKPLKQIQWLAEDERDSNIDLAQQAGAPEAPIAPPALQQRPDAFGGPAAYPPQHPPAPMYGHQDPHAPQQQRYGEAPFGDQQPPPFGAPPQFPPYGQQGPXXXXDARGGPGGPRPGGFEGPXXGRQAPPFRHGGGVEGXXXXXXXXXXXXXXXXXAGXXXXXXXXXXXXXXXXXXXXGPIHPTHAREGAPPCAFWGHNVRTCRKGEICDFVHDDNNTNLTVPGGXXXXXXXXGDMGXXXXXXXXXXXXXXXXXFSSRGGRATXXXRGGSVILEEYRKQQLTERIKDLVTPSTGLNEDGEPCAKFNGFVYLGGGRKADGNYVLSVAHALDSAAVAYRAVVKGKTVDLIEIKRSPHVDAVVFRCQQPLPALTAPIPYSGGQVGNHAFMLTRRGDAEHERQLIRGVITSLKSHGTAAMVTDARDAGAPIFTPNGYFIGLMLGRSCVDNGDAAFVPAEDLYAFLWMAESVPQLPMLKDEICDFVRDDNNTNLTVPGGGRGRAGAGGTWAGGSLGLGEYRKQQLTERIKDLVTPSTGLNKDGEPCAKFNGFVYLGGGQKADGNVLSVAHALDSAAVAYRAVVKGKTVDLIEIKRSPRADAVLFRCKEPLPALTAPIPPSEGIVGRLAFMLTRRGDAEHEHELIEGTITSLKRHGTTLMVTDARDAGAPIFTPNGYFIGLMLGRSCVDNGDAAFVPAEDLYAFLWMAESVPQLPESKQXXXXXXXXXLQPQHTGAMEPVAVISAPPSSHGNLEEFHQQQLTERIKDLVTPITGYDKDGKPCAKFNGFLYLGGGQKADGNYVLSVAHALDSAAVAYRAVVKGKTVDLIEIKRSPRADAVVFRCKEPLPALTAPIPPSEGKVGRLAFMLTRRGDAEHEHELIKGTITSLKRHGTTLMVTDARDAGAPIFTPNCYFIGLMLGRSCVDNGDAEFVTAGPLCAFLWMAESVPQLPESKVRDTN 1639          
BLAST of jgi.p|Trimin1|346324 vs. uniprot
Match: A0A835ZH68_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH68_9STRA)

HSP 1 Score: 217 bits (552), Expect = 8.990e-54
Identity = 173/453 (38.19%), Postives = 239/453 (52.76%), Query Frame = 0
Query:  967 LTERIKDLVTPSTGLNEDGEPCAKFNGFVYLGGGRKADGNYVLSVAH--ALDSAAVAYRAVVKGKTVDLIEIK--RSPHVDAVVFRCQQPLPALTAPIPYSGGQVGNHAFMLTRRGDAEHERQLIRGVITSLKSHGTAAMVTDARDA---GAPIFTPNGYFIGLMLGRSCVDNGDAAFVPAEDLYAFLWMAESVPQLPMLKDEICDFVRDDN-NTNLTVPGGGRGRAGAGGTWAG-GSLGLGEYRKQQ--------LTERIKDLVTPSTGLNKDGEPCAKFNGFVYLGGGQKADGNVLSVAHALDSA--AVAYRAVVKGKTVDLIEIK--RSPRADAVLFRCKEPLPALTAPIPPSEGIVGRLAFMLTRRGDAEHEHELIEGTITSLKRHGTTLMVTDARDA---GAPIFTPNGYFIGLMLGRSCVDNGDAAFVPAEDLYAFLWMAESVPQLP 1395
            LT+R+++LV     ++ +G  C  FNG +YLGGG++  G YV+SV H  A D A   YRA+V+G TV L +IK  R  + D VVFRC++ LP L AP+P + G  G  A++  RR DA H   L+RG I S +       +TD  DA   GAP+ TP G  +GL+  RS  DN   A+V    +   L+   S P LP        F R     + +  P           T AG   + + +Y            LT+R+++LV     ++ +G+    F+G +YLGGGQK    V+SV H L +A  AV YRAVV+G TV L +IK  R    D V+FRC+E LP L AP+P + G  GR A++  RR DA +   L+ G ITS +    T+ +TD  DA   GAP+ TP G  +GL+  RS  D    A+V    +   L+   S P LP
Sbjct:  516 LTQRMQNLVILIQAIDSNGGTCKTFNGVLYLGGGQQK-GCYVISVVHMPAADDA-TTYRALVQGTTVRLTQIKTGRKVNGDVVVFRCEEALPELPAPMPVAMGYAGRRAYVFARRDDATHV--LLRGKIASWELREGTISLTDHVDACYAGAPVVTPQGILVGLLDSRSG-DNQPTAYVSIGIIDVILYA--SPPHLPA-------FPRLQGLESQVGAP-----------TTAGIKPIVVQDYASPTYEADLPHLLTQRMQNLVILIQAIDSEGDTFKTFDGVLYLGGGQKKGSYVISVMH-LPAAGEAVTYRAVVQGTTVRLTQIKTGRKVNMDVVVFRCEEALPELPAPMPVAMGYAGRSAYVFARRDDATYV--LLRGKITSWELREGTISLTDHVDACYAGAPVVTPQGILVGLLDSRSA-DKQPTAYVSIGIIDVILYA--SPPHLP 937          
BLAST of jgi.p|Trimin1|346324 vs. uniprot
Match: A0A836CCZ8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCZ8_9STRA)

HSP 1 Score: 150 bits (380), Expect = 8.830e-36
Identity = 97/214 (45.33%), Postives = 129/214 (60.28%), Query Frame = 0
Query:  957 VILEEYRKQQLTERIKDLVTPSTGLNEDGEPCAKFNGFVYLGGGRKADGNYVLSVAHAL-DSAAVAYRAVVKGKTVDLIEIKRSPH--VDAVVFRCQQPLPALTAPIPYSGGQVGNHAFMLTRRGDAEHERQLIRGVITS-LKSHGTAAMVTDARDA-GAPIFTPNGYFIGLMLGRSCVDNGDAAFVPAEDLYAFLWMAESVPQL---PMLKDE 1162
            V  E+ R+Q +TER+K LVTP    N   +PCA+ NG +YLGGG K +GN+VLSVAH    +  + Y+AVV+GK VDL+E+KR     VDAVVFRCQQ +PAL AP+P+  G +G   +++  +GDA  E  L  G I S  +  GT A+  +     GAP+ T  G  +GLMLG +   N +A F  A  +  FL M  S PQL   PM  +E
Sbjct:   11 VYSEQARRQFITERVKTLVTPIVAFNSSNDPCARSNGILYLGGGEK-EGNHVLSVAHLFYPNQMMTYQAVVQGKPVDLVEVKRGTFMDVDAVVFRCQQGVPALPAPMPFDAGLIGCLVYVVAYQGDATPE--LTEGKIISWARRQGTVALDDEGPCCPGAPLLTQEGALLGLMLGSTV--NKEATFASAPVIDTFLLM--SPPQLQGLPMRPEE 217          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|346324 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835ZEC8_9STRA0.000e+0100.00C3H1-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835ZH68_9STRA8.990e-5438.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CCZ8_9STRA8.830e-3645.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 126..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 702..826
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1395..1414
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..247
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1395..1418
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 735..749
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 769..787
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 873..902
score: 10.990506
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 1232..1381
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 991..1143
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 1439..1607

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_1contigContig_1:290869..309024 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|346324mRNA_967Tribonema minus UTEX_B_3156 mRNAContig_1 290869..309024 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|346324|estExt_Genemark1.C_Ctg_10066 ID=Trimin1|346324|estExt_Genemark1.C_Ctg_10066|Name=jgi.p|Trimin1|346324|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1640bp
MQLEDRSLLLSVLQISRKQTACLAAFVEYGGLRVLRHWVFSWFNKKDLDK
TAKAYLTELLLQVCTRLPVNFTALLQSRVSTIFKLISNESYLGSDNIKAL
CKELKKEWKTSGARTEPQHAAQYMQIKAYLDTKARLRDEAAKQEAEEAAA
ATAAAEKEAAAALPPPALKRAPSLTIAAPSANAKAEERSAKSTSTLKSSG
GDTPGASAAAAAGAARPGFKRQLSDSSKLLDVGPLQPGGVARPRKQNKIQ
LIDATQVKAKQQGGVVTGEASVKRAPDADADADAEMADAQAVTRGETAAA
EPGKKKSILKVPKKEEAVAAAPAVSVITGKAPKPITSKVSLAVMGAVAAA
ASGGGGGAGGPPRMLAFGDDKKRAGKAHVFTIKWADQVQKSLREVKEFKM
DDESMKVMQTATAHELHHHEPRAWRDMVKKERLNERESLQQSRLKPVDAE
AASEGKENAVMTPQIPWATPRPLPKRLNADGVEADDTIESTELEAQQLRC
RGVMTAGLSVPVAVPDPMGAQHLYRDLLLPNMATMVAHWLSDCKQRSAEE
LLVRPAAALDQQRRLARAAAWVSAPASGTVAAAAAHRAHCAEPALAARRC
HRQRRCRMCRAAAAAAAGGSGWDSLKARQLRTPRQRHRAQALVVVVAEDD
GDGGQRLAQPQEVFYISAADIPDTPSEVGTVIVPFNPNKPLKQIQWLAED
ERDSNIDLAQQAGAPEAPIAPPALQQRPDAFGGPAAYPPQHPPAPMYGHQ
DPHAPQQQRYGEAPFGDQQPPPFGAPPQFPPYGQQGPPPFGDARGGPGGP
RPGGFEGPPPGRQAPPFRHGGGVEGGAAAAMAGGGGGGGGGGAGAGAGAG
VGGGAGGGAGGLAGGPIHPTHAREGAPPCAFWGHNVRTCRKGEICDFVHD
DNNTNLTVPGGGRGRGRGRGDMGRGRGEFGRGGVRGGRGGFSSRGGRATR
GGRGGSVILEEYRKQQLTERIKDLVTPSTGLNEDGEPCAKFNGFVYLGGG
RKADGNYVLSVAHALDSAAVAYRAVVKGKTVDLIEIKRSPHVDAVVFRCQ
QPLPALTAPIPYSGGQVGNHAFMLTRRGDAEHERQLIRGVITSLKSHGTA
AMVTDARDAGAPIFTPNGYFIGLMLGRSCVDNGDAAFVPAEDLYAFLWMA
ESVPQLPMLKDEICDFVRDDNNTNLTVPGGGRGRAGAGGTWAGGSLGLGE
YRKQQLTERIKDLVTPSTGLNKDGEPCAKFNGFVYLGGGQKADGNVLSVA
HALDSAAVAYRAVVKGKTVDLIEIKRSPRADAVLFRCKEPLPALTAPIPP
SEGIVGRLAFMLTRRGDAEHEHELIEGTITSLKRHGTTLMVTDARDAGAP
IFTPNGYFIGLMLGRSCVDNGDAAFVPAEDLYAFLWMAESVPQLPESKQQ
QQQQQQQQLQPQHTGAMEPVAVISAPPSSHGNLEEFHQQQLTERIKDLVT
PITGYDKDGKPCAKFNGFLYLGGGQKADGNYVLSVAHALDSAAVAYRAVV
KGKTVDLIEIKRSPRADAVVFRCKEPLPALTAPIPPSEGKVGRLAFMLTR
RGDAEHEHELIKGTITSLKRHGTTLMVTDARDAGAPIFTPNCYFIGLMLG
RSCVDNGDAEFVTAGPLCAFLWMAESVPQLPESKVRDTN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
IPR009003Peptidase_S1_PA