Trimin1|346319|estExt_Genemark1.C_Ctg_10055 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|346319
Unique NameTrimin1|346319|estExt_Genemark1.C_Ctg_10055
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length771
Homology
BLAST of jgi.p|Trimin1|346319 vs. uniprot
Match: A0A836CNG0_9STRA (Signal recognition particle subunit SRP68 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNG0_9STRA)

HSP 1 Score: 1431 bits (3703), Expect = 0.000e+0
Identity = 770/770 (100.00%), Postives = 770/770 (100.00%), Query Frame = 0
Query:    1 MGEKGVMYVELPAGGEDIESLWLTKVYAACGVQAQAGEDLSESLVLQTALLQLKRAREQRQHKHAQLLPGAERAVGDDPSDMMPVFVTDLTSRTGLDQLYQLLLLFKQRVLSGNLGTGSMEVESEQAPKLSLRIHETIKEKQSANGLRHGDYLQYRHYCSRRLRRVRTNKQVKFTFGKGKQFTKKTLTLDMAKNAAFLEIPLMFAERSWAFAMQLKQDLGSSSSTSSAERHHLMRRLSKAAKWASDLETLCAAAGDERTALEACAYAAFMCGNVLLEKESWGGALEKLTTVHRVCRELGQVGDLADQDLFSARAEEIEPSVRYCKYNLSKAGGATTATESFSLDQQNXXXXXXXLLAAKLASVVSEARLQQAKALAHVDWQARRIPVRGQGLSVALIAAREASRGLEAALRTGGGVGGRNDALSVRVLNGWDDVAGEAAKETAALQGKGGGARVEGQRMELALLSAYAKHSKLRLMVKRNEALVEGLKQASTGGSEPRNADIVHLYKALMQNVREMKDCLSVAAAATDLASSESADMXXXXXXEHEAALAEVEADEAWYRACRCFYLSEAYAEQGKWQEASALLESHAPSLCDEALDKAEDLADVQREGAKTQTLTRTDRIKELASMVEGGRLRAAASLYLAPHTEPKEQVDQDANEEGDEHEDSGTSPASEALPDRTLLERLYDFDDGADSTPAPADGSPAEPTTFRIEAIPPRLAPIPAKPLLLDGAFNLHLQFPDLSARAGAPEAAATAANTRGSLTGLVRWAFGRG 770
            MGEKGVMYVELPAGGEDIESLWLTKVYAACGVQAQAGEDLSESLVLQTALLQLKRAREQRQHKHAQLLPGAERAVGDDPSDMMPVFVTDLTSRTGLDQLYQLLLLFKQRVLSGNLGTGSMEVESEQAPKLSLRIHETIKEKQSANGLRHGDYLQYRHYCSRRLRRVRTNKQVKFTFGKGKQFTKKTLTLDMAKNAAFLEIPLMFAERSWAFAMQLKQDLGSSSSTSSAERHHLMRRLSKAAKWASDLETLCAAAGDERTALEACAYAAFMCGNVLLEKESWGGALEKLTTVHRVCRELGQVGDLADQDLFSARAEEIEPSVRYCKYNLSKAGGATTATESFSLDQQNXXXXXXXLLAAKLASVVSEARLQQAKALAHVDWQARRIPVRGQGLSVALIAAREASRGLEAALRTGGGVGGRNDALSVRVLNGWDDVAGEAAKETAALQGKGGGARVEGQRMELALLSAYAKHSKLRLMVKRNEALVEGLKQASTGGSEPRNADIVHLYKALMQNVREMKDCLSVAAAATDLASSESADMXXXXXXEHEAALAEVEADEAWYRACRCFYLSEAYAEQGKWQEASALLESHAPSLCDEALDKAEDLADVQREGAKTQTLTRTDRIKELASMVEGGRLRAAASLYLAPHTEPKEQVDQDANEEGDEHEDSGTSPASEALPDRTLLERLYDFDDGADSTPAPADGSPAEPTTFRIEAIPPRLAPIPAKPLLLDGAFNLHLQFPDLSARAGAPEAAATAANTRGSLTGLVRWAFGRG
Sbjct:    1 MGEKGVMYVELPAGGEDIESLWLTKVYAACGVQAQAGEDLSESLVLQTALLQLKRAREQRQHKHAQLLPGAERAVGDDPSDMMPVFVTDLTSRTGLDQLYQLLLLFKQRVLSGNLGTGSMEVESEQAPKLSLRIHETIKEKQSANGLRHGDYLQYRHYCSRRLRRVRTNKQVKFTFGKGKQFTKKTLTLDMAKNAAFLEIPLMFAERSWAFAMQLKQDLGSSSSTSSAERHHLMRRLSKAAKWASDLETLCAAAGDERTALEACAYAAFMCGNVLLEKESWGGALEKLTTVHRVCRELGQVGDLADQDLFSARAEEIEPSVRYCKYNLSKAGGATTATESFSLDQQNXXXXXXXLLAAKLASVVSEARLQQAKALAHVDWQARRIPVRGQGLSVALIAAREASRGLEAALRTGGGVGGRNDALSVRVLNGWDDVAGEAAKETAALQGKGGGARVEGQRMELALLSAYAKHSKLRLMVKRNEALVEGLKQASTGGSEPRNADIVHLYKALMQNVREMKDCLSVAAAATDLASSESADMXXXXXXEHEAALAEVEADEAWYRACRCFYLSEAYAEQGKWQEASALLESHAPSLCDEALDKAEDLADVQREGAKTQTLTRTDRIKELASMVEGGRLRAAASLYLAPHTEPKEQVDQDANEEGDEHEDSGTSPASEALPDRTLLERLYDFDDGADSTPAPADGSPAEPTTFRIEAIPPRLAPIPAKPLLLDGAFNLHLQFPDLSARAGAPEAAATAANTRGSLTGLVRWAFGRG 770          
BLAST of jgi.p|Trimin1|346319 vs. uniprot
Match: D8LF41_ECTSI (Signal recognition particle subunit SRP68 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF41_ECTSI)

HSP 1 Score: 430 bits (1105), Expect = 1.100e-137
Identity = 296/670 (44.18%), Postives = 390/670 (58.21%), Query Frame = 0
Query:  120 MEVESEQAP---KLSLRIHETIKEKQSANGLRHGDYLQYRHYCSRRLRRVRTNKQVKFTFGKGKQFTKKTLTLDMAKNAAFLEIPLMFAERSWAFAMQLKQDLGSSSSTSSAERHHLMRRLSKAAKWASDLETLCAAAGDERTALEACAYAAFMCGNVLLEKESWGGALEKLTTVHRVCRELGQVGDLADQDLFSARAEEIEPSVRYCKYNLSKAGGATTATESFSLDQQNXXXXXXXLLAAKLASVVSEARLQQAKALAHVDWQARRIPVRGQGLSVALIAAREASRGLEAALRTGGGVGGRNDALS---VRVLNGWDDVAGEAAKETAALQGKGGGARVEGQRMELALLSAYAKHSKLRLMVKRNEALVEGL--KQASTGGSEPRN-----ADIVHLYKALMQNVREMKDCLSVAAAATDLASSESADMXXXXXXEHEAALAEVEADEAWYRACRCFYLSEAYAEQGKWQEASALLESHAPSLCDEALDKAEDLADVQREGAKTQTLTRTDRIKELASMVEGGRLRAAA-SLYLAPHTEPKEQVDQDANEEGDEHEDSGTSPASEALPDRTLLERLYDFDDGADSTPAPADGSPAEPTTFRIEAIPPRLAPIPAKPLLLDGAFNLHLQFPDLSARAG------APEAAATAANTRGSLTGLVRWAFGR 769
            MEV  E AP   KLSL++HE  K+ Q+ NGLRHGDY QYR YC+RRL+RVR+  QV+F FGKGK F +K LT +   +A+ LEIPLM AER+WAFAMQ KQ+   ++      R H++ RL+KAAKW+ DLE LC    DERT LEA AY A+M GN+LLEKE+W  AL++ +T  R+C+ELG+VG + DQDLFS R EEIEP +RYC+YNL     AT + E   + +++       LLAAKL SVV+EAR +QA AL  V+W+ +++ VR + L VAL+ A E +R LEA    GGG  G  D      ++V   +DD  G  ++ET+ LQGKGGGA++E  R EL  L AYA+H KLRLM++RNE LV+ L  K+ + GG   R+     ADIVH+Y AL+Q+VR M          T+L   +  D         +  +    ADEA +RA RCF++ EA++ Q KW EASAL   H  +LC EA +  +D      +  + ++LT      EL  MV+G   R AA +L L    E       D    G      G +  +     R L ERL +FD     +     GS     T+RI   PP L  +P KP LLD AF+  L+FPD+  RAG        E    AA   G ++G V WA GR
Sbjct:   15 MEVAKEPAPSLAKLSLKVHEIAKDAQNRNGLRHGDYHQYRQYCTRRLKRVRSLPQVRFMFGKGKGFVQKELTPESVTSASHLEIPLMMAERAWAFAMQRKQE---TADAPYRVRRHVVTRLAKAAKWSGDLEALCLETADERTCLEATAYCAWMSGNLLLEKEAWREALDRFSTADRICQELGKVGAIEDQDLFSRRVEEIEPILRYCRYNLD----ATASEELLEMSREDSSAGGD-LLAAKLESVVAEARKKQASALDSVEWRGKKVAVRSETLRVALVKADELARRLEA----GGGSPGCEDPKPGQYLKVFGAYDDALGTISQETSRLQGKGGGAKMEAHRSELEGLRAYAQHHKLRLMLQRNERLVQELQEKRKAGGGGGERDPVGEVADIVHVYDALLQSVRSM---------VTNLGGGD--DENDDIAELEDEVIESARADEARFRAFRCFFVIEAFSAQQKWAEASALF-GHTRTLCQEAAEMLDD------DDPRAESLT------ELDEMVQGAWHRTAAHALLLKSKQEAALSAGVDGISIG-----GGVNAGACPWAGRPLQERLKEFDPAGGGSGTAERGSKKR--TYRIADFPPSLQLVPCKPRLLDLAFD-ELEFPDIDERAGIEKEPEVEEEPKGAAAGGGGISGWVGWALGR 640          
BLAST of jgi.p|Trimin1|346319 vs. uniprot
Match: A0A7S2BZZ1_9STRA (Signal recognition particle subunit SRP68 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BZZ1_9STRA)

HSP 1 Score: 302 bits (774), Expect = 1.520e-89
Identity = 230/643 (35.77%), Postives = 332/643 (51.63%), Query Frame = 0
Query:  118 GSMEVESEQAPKLSLRIHETIKEKQSANGLRHGDYLQYRHYCSRRLRRVRTNKQVKFTFGKGKQFTKKTLTL-DMAKNAAFLEIPLMFAERSWAFAMQLKQDLGSSSSTSSAERHHLMRRLSKAAKWASDLETLCAAAGDERTALEACAYAAFMCGNVLLEKESWGGALEKLTTVHRVCRELGQVGDLADQDLFSARAEEIEPSVRYCKYNLSKAGGATTATESFSLDQQNXXXXXXXLLAAKLASVVSEARLQQAKALAHVDWQARRIPVRGQGLSVALIAAREASRGLEAALRTGGGVGGRNDALSVRVLNGWDDVAGEAAKETAALQGKGGGARVEGQRMELALLSAYAKHSKLRLMVKRNEALVEGLKQ---------------ASTGGSEPRNADIVHLYKALMQNVREMKDCLSVAAAATDLASSESADMXXXXXXEHEAALAEVEADEAWYRACRCFYLSEAYAEQGKWQEASALLESHAPSLCDEALDKAEDLADVQREGAKTQTLTRTDRIKELASMVEGGRLRAAASLYLAPHTEPKEQVDQDANEEGDEHEDSGTSPASEALPDRTLLERLYDFDDGADSTPAPADGSPAEPTTFRIEAIPPRLAPIPAKPLLLDGAFNLHLQFPDLSARAG 744
            G  +  S  A  ++LR+HETI   Q  NGLRHGDY Q     +RRLRRVR  K   FT+G+G+QF ++ LT  D+  +A  L +PL+ +ER+WA+AMQLKQ++ +    ++A  +HL+RRL+KA +W++  E LC    D+ T LEA AYA++M  N+ LE+  W GALEK TT HR+C ++G VG +  QDLF+ RAEEI  S+R+C YNL+  GG++++T++              LL A+L +V+ +AR +QA+ L  + W++  I VR + L +A+++ARE    LE+          R+D    +VLN  +D         ++L    GG ++E QR +L LLS Y  H KL  M +R++ LV  L++               A+   S  R  DIVHLY +L Q +++M   L       DLA +             +A LA V       RA RC++L+E Y+   K  EA  L + HA  +  +A D  E   DVQ E A+         I  L   V G + RA A  +L+                      S  +PASE  P   L +RL  +D G                +F++  +PP   PI  KPLL D A N +L FPD   +AG
Sbjct:    2 GDEDEPSALAEPIALRVHETISSLQGLNGLRHGDYEQXXXXATRRLRRVR--KGANFTYGRGRQFVQRELTAEDVEASAPLLMVPLLNSERAWAYAMQLKQEI-TRGEGNAAVSNHLLRRLTKAVQWSAAFEELCKVRADDATRLEANAYASWMAANLDLERGEWAGALEKYTTAHRICEDMGTVGSVELQDLFTQRAEEIRQSIRFCNYNLT--GGSSSSTDA----PPTLTGSGGDLLQAQLDAVLVDARKRQAQTLEELTWRSHTIAVRDETLRLAIVSARELDGDLESTTADD-----RSDNQYSKVLNACEDALKIVNSNISSLATMTGGTKLEAQREDLRLLSGYLSHIKLTRMFERSKRLVLELRESWKIHTLTFSANKSSAAAAKSPARPEDIVHLYGSLTQILQDML-ALPGVEEDDDLADA------------LQAKLASV-------RAHRCYFLAETYSTNAKSSEALVLYD-HAAQIAAQASDLLETCEDVQDELAE---------ITLLQGAVSGAKSRAQAQAFLSSK--------------------SKEAPASEPPPSSGLQQRLAAYDAGKVGD------------SFKLAEVPPGFRPIQCKPLLFDVAHN-YLDFPDFDEKAG 567          
BLAST of jgi.p|Trimin1|346319 vs. uniprot
Match: A0A7S2B7L4_9STRA (Signal recognition particle subunit SRP68 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B7L4_9STRA)

HSP 1 Score: 284 bits (727), Expect = 1.140e-82
Identity = 219/666 (32.88%), Postives = 327/666 (49.10%), Query Frame = 0
Query:  113 GNLGTGSMEVESEQAPKLSLRIHETIKEKQSANGLRHGDYLQYRHYCSRRLRRVRTNKQVKFTFGKGKQFTKKTLTLDMAKNAAFLEIPLMFAERSWAFAMQLKQDLGSSSSTSSAERH---HLMRRLSKAAKWASDLETLCAAAGDERTALEACAYAAFMCGNVLLEKESWGGALEKLTTVHRVCRELGQVGDLADQDLFSARAEEIEPSVRYCKYNLSK---AGGATTATESFSLDQQNXXXXXXXLLAAKLASVVSEARLQQAKALAHVDWQARRIPVRGQGLSVALIAAREASRGLEA-ALRTGGGVGGRNDALSVRVLNGWDDVAGEAAKETAALQGKGGGARVEGQRMELALLSAYAKHSKLRLMVKRNEALVEGLKQ-------ASTGGSEPRNADIVHLYKALMQNVREMKDCLSVAAAATDLASSESADMXXXXXXEHEAALAEVEADEAWYRACRCFYLSEAYAEQGKWQEASALLESHAPSLCDEALDKAEDLADVQREGAKTQTLTRTDRIKELASMVEGGRLRAAASLYLAPHTEPKEQVDQDANEEGDEHEDSGTSPASEALPDRTLLERLYDFDDGADSTPAPADGSPAEPTTFRIEAIPPRLAPIPAKPLLLDGAFNLHLQFPDLSARAGAPEAAATAANTRGSLTGLVR 764
            G     +ME E+E   K  L+IHE + + Q  NG+RH DY  YR + +RRLR+VR  K + FT+G+G+ F KK +T + A+  A L I L+  ER+WA+AMQLKQ +    S    E H   H++RR +KA KW++ LE L     D RT LE  AYA++M  N+ +E+E+W  ALE  TT HR+C ELG+VG L  QDLF+ R+EEI  S+RYC YN+      GG   A     +            + A  AS V    +        ++W+  +IP+  + L   ++ A+E  R L+  AL        R ++   +V+N +DD     + +   L    GGA+ E  R +L+LL+    + KL  M++RN+ L  GL+        A  GG+  R  DIVHLY A+ Q  ++M     V                     + +  + E +A     RACRCF+L+E Y+   +  +A AL  +HA ++   A D+ E L       AK+      ++++EL S   G R R  A  +L          D  +N+E         +   + +  R+L ER++ +D       AP D    +  T  + A+PP   P+  KP+L + A + HL FPDL  +AG  E        +G L G +R
Sbjct:    1 GEARPNNMEDEAE--VKAELKIHEVVAKLQQLNGMRHSDYEAYRRFLTRRLRKVR--KSINFTYGRGRNFVKKEITAENAQ-PAHLMILLLNTERAWAYAMQLKQTMNRGES----ENHLANHMLRRFTKAVKWSTALEQLSGNLADGRTCLEINAYASWMSANLYVEQEAWSKALENFTTAHRICEELGKVGSLEQQDLFTQRSEEITQSIRYCNYNMGSDKGEGGVAEAMADGGMQSSAELEAQLDAVTASTASAVDNKDM--------MEWRHHKIPIHDEDLRKQVVKAKEVDRNLDTTALEE------RKESQYFKVINAYDDALHTLSTKLDKLSEVSGGAKAEAMRRDLSLLTGALSYLKLSRMLERNKQLATGLRATWRAETLARAGGANARPEDIVHLYDAVGQIYQDMIKLTGVE--------------------DDDDLMDEFQAKMMLNRACRCFFLAETYSNNSRPSDALALY-NHANNIAIAAADQLETLRPEDETEAKSVE-QELEQVRELQSEAAGARSRVQAQAFLRSQ-------DSKSNDE---------TTVDDRVIIRSLQERIHIYD-------APRDN---DRDTLVVAAVPPAFRPVQCKPILFNKAHD-HLTFPDLDVQAGVGEK-----ERKGGLFGWLR 589          
BLAST of jgi.p|Trimin1|346319 vs. uniprot
Match: A0A6A7G753_9CRUS (Signal recognition particle subunit SRP68 n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G753_9CRUS)

HSP 1 Score: 243 bits (619), Expect = 3.460e-67
Identity = 214/648 (33.02%), Postives = 316/648 (48.77%), Query Frame = 0
Query:  120 MEVESEQAPKLSLRIHETIKEKQSANGLRHGDYLQYRHYCSRRLRRVRTNKQVKFTFGKGKQFTKKTLTLDMAKNAAFLEIPLMFAERSWAFAMQLKQDLGSSSSTSSAERHHLMRRLSKAAKWASDLETLCAAAGDERTALEACAYAAFMCGNVLLEKESWGGALEKLTTVHRVCRELGQVGDLADQDLFSARAEEIEPSVRYCKYNLSKAGGATTATESFSLDQQNXXXXXXXLLAAKLASVVSEARLQQAKALAHVDWQARRIPVRGQGLSVALIAAREASRGLEAALRTGGGVGGRNDA-----LSVRVLNGWD--------DVAGEAAKETAALQGKGGGARVEGQRMELALLSAYAKHSKLRLMVKRNEALVEGLKQA-----------STGGSEPRNADIVHLYKALMQNVREMKDCLSVAAAATDLASSESADMXXXXXXEHEAALAEVEADEAWYRACRCFYLSEAYAEQGKWQEASALLESHAPSLCDEALDKAEDLADVQREGAKTQTLTRTDRIKELASMVEGGRLRAAASLYLAPHTEPKEQVDQDANEEGDEHEDSGTSPASEALPDRTLLERLYDFDDGADSTPAPADGSPAEPTTFRIEAIPPRLAPIPAKPLLLDGAFNLHLQFPDLSARA 743
            ME++     K++L I   IK  Q  NGLRH DY +YR YC+RRLRRVR  K +KFT G+ K F K+T+ L   K+  +L IPLM AER+WA+AMQ K ++      S   R HL+RRL+KAA W+S L  LC+ A D RTALEA AY ++M GN+LLE+E W  ALEK      V  +L ++G+L    L   R+E + PS++YC Y L  + G   +  S  L  +        +L +K+ +V+S+ R QQAK+   + W+   +P+  + + ++++ + E +  L+          G+ +A     L + V + +D        D+  EA K    ++G   G R     + L LL  Y    KLR  + RN  L E L  +           S G    + +D+V +Y+ L+ NV  + +         ++ S+ES          H+    EV    A + + RCFY++E+YA   KW EA AL +      C E       LA +Q   +     T    +++L+S     R+   A   LA   +        +    D+ +DS         P  TLL+RL  FD           GSP E   + +   PPR   IP KP+L D AFN +++F DLS RA
Sbjct:    1 MEIDEANEFKVTLPILAVIKTSQQQNGLRHNDYRRYRQYCTRRLRRVR--KTLKFTHGR-KNFVKRTVELKDIKDERYLLIPLMQAERAWAYAMQQKHEMTDDRDRS---RFHLIRRLTKAAFWSSQLTKLCSVAADARTALEAEAYCSWMNGNILLEREIWSDALEKFVHAKTVFDQLSKLGNLEQNALCHERSENLGPSIKYCSYVLGSSAGGDGSLNSELLKDRGTLDE---ILLSKVENVMSDIRTQQAKSFDTIQWKGEYVPIHNEKVRLSILRSNELTSQLD----------GQENAEKQMDLFIEVFSSYDEALVFVRNDLQNEANKR---VRGSEPGPR----EVALGLLRDYLTFHKLRNTIHRNLLLTESLTASLDSENNSDQPPSIGKKSVKPSDLVVMYEKLLNNVENLGE-------VGEMKSNESL---------HQ----EVRLKTAVFTSFRCFYVAESYAAALKWAEAYALYQR-----CVEHC-----LAAIQLFRSLEINSTEIVSLEKLSSNASARRVFVHAHGLLALEDQENSITSNVSKLAIDDRKDSHLKLFD---PKPTLLQRLNTFD----------SGSPQE--HYNLIHFPPRFEAIPCKPILFDLAFN-YVEFRDLSHRA 576          
BLAST of jgi.p|Trimin1|346319 vs. uniprot
Match: A0A2P6VBQ7_9CHLO (Signal recognition particle subunit SRP68 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VBQ7_9CHLO)

HSP 1 Score: 239 bits (611), Expect = 8.670e-66
Identity = 216/644 (33.54%), Postives = 308/644 (47.83%), Query Frame = 0
Query:  128 PKLSLRIHETIKEKQSANGLRHGDYLQYRHYCSRRLRRVRTNKQVKFTFGKGKQFTKKTLTLDMAKNAAFLEIPLMFAERSWAFAMQLKQDLGSSSSTSSAERHHLMRRLSKAAKWASDLETLCAAAGDERTALEACAYAAFMCGNVLLEKES-WGGALEKLTTVHRVCRELGQVGDLADQDLFSARAEEIEPSVRYCKYNLSKAGGATTATESFSLDQQNXXXXXXXLLAAKLASVVSEARLQQAKALAHVDWQARRIPVRGQGLSVALIAAREASRGLEAALRTGGGVGGRNDA---LSVRVLNGWDDVAGEAAKETAALQGKGGGARVEGQRMELALLSAYAKHSKLRLMVKRNEALV--------EGLKQASTGGS------EPRNA-DIVHLYKALMQNVREMKDCLSVAAAATDLASSESADMXXXXXXEHEAALAEVEADEAWYRACRCFYLSEAYAEQGKWQEASALLESHAPSLCDEALDKAEDLADVQREGAKTQTLTRTDRIKELASMVEGGRLRAAASLYLAPHTEPKEQVDQDANEEGDEHEDSGTSPASEALPDRTLLERLYDFDDGADSTPAPADGSPAEPTTFRIEAIPPRLAPIPAKPLLLDGAFNLHLQFPDLSARAGAPEAAATA 752
            P LSL + + +K+ QS +GL+H DY +YR YCSRRLRR+   K VKF  G+G+ + KK L  +  K+   L IPL+ AER+WA+AM LK  L  + + ++ +R HL+RRLSKAA+ A +L  L +A  D RT LEA AY+ +M G+VLLEKES W GAL +     ++  EL +VG L  Q +     +++EP++RYC Y +S+ GGA     S     ++       LL +KLAS+ + A+ Q+A A + + W      VR   + + L  A+E    LE A+   G      +A   L  R +N + + A  A K   AL     G   E  R EL  L    +  +L   V+RN  L          GL++A  GG        P  A D+V LY +L+ NV E+ D  ++   A                   E  + E  A +A Y+A RC +++ +Y E GK  EA  L +      C +A  K ED A  + + A T  L +          V     RAA            E  D+ A +EG +    G S   E          L +  D  +S   P    P      RI  +PP L  +P +P+ LD A N ++Q P+LS R  A  AA  A
Sbjct:   19 PTLSLEVLQIVKDAQSIHGLKHSDYQRYRQYCSRRLRRI--YKSVKFLHGRGR-YQKKQLQPEGVKDVRHLHIPLVQAERAWAYAMDLKGQLEDAPAAAAPKRQHLVRRLSKAARHAGELVALASARCDARTQLEAEAYSLWMAGSVLLEKESDWEGALARFLRAQKMFGELAKVGSLEQQGVCKHFLDQVEPTIRYCNYQISRKGGAAPDPASLL---ESIGDGGSDLLQSKLASLAAAAQAQRAAATSELHWAGESYRVREDKIRIPLTQAQELEAELEGAMEAEGAGAADLEARVSLHDRAINAYGE-ARSAIKSQLAL-----GQDSEQLRGELLALERAVQGLQLERTVRRNRFLAGDAEARFARGLRRALGGGKAGAARERPAKAEDVVRLYDSLIANVVELNDLAALLGGAAG-----------------EMLMDECSAKQAHYQAARCLFVAHSYLEGGKAAEAEGLFD-RTVQRCQQAASKYEDCA--KPDVAATADLAQVQEAAAAWGAVAAAEQRAA------------ELRDKQAAQEGLQ----GMSLEGEGKKRSAGQAFLAEEPDRFESFVGPKGVEP------RITRVPPALRTMPVRPIFLDSALN-YVQAPNLSHRLPAKSAAPAA 607          
BLAST of jgi.p|Trimin1|346319 vs. uniprot
Match: A0A7S3T9Z8_EMIHU (Signal recognition particle subunit SRP68 n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3T9Z8_EMIHU)

HSP 1 Score: 230 bits (587), Expect = 2.210e-62
Identity = 210/638 (32.92%), Postives = 301/638 (47.18%), Query Frame = 0
Query:  125 EQAPKLSLRIHETIKEKQSANGLRHGDYLQYRHYCSRRLRRVRTNKQVKFTFGKGKQFTKKTLTLDMAKNAAFLEIPLMFAERSWAFAMQLKQDLGSSSSTSSAERHHLMRRLSKAAKWASDLETLCAAAGDERTALEACAYAAFMCGNVLLEKESWGGALEKLTTVHRVCRELGQVGDLADQDLFSARAEEIEPSVRYCKYNLSKAGGATTATESFSL-DQQNXXXXXXXLLAAKLASVVSEARLQQAKALAHVDWQARRIPVRGQ----GLSVALIAAREASRGLEAALRTGGGVGGRND---ALSVRVLNGWDDVAGEAAKETAALQGKGGGARVEGQRMELALLSAYAKHSKLRLMVKRNEALVEGLKQAS-TGGSEPRNA--DIVHLYKALMQNVREMKDCLSVAAAATDLASSESADMXXXXXXEHEAALAEVEADEAWYRACRCFYLSEAYAEQGKWQEASALLESHAPSLCD-EAL--DKAEDLADVQREGAKTQTLTRTDR------IKELASMVEGGRLRAAASLYLAPHTEPKEQVDQDANEEGDEHEDSGTSPASEALPDRTLLERLYDFDDGADSTPAPADGSPAEPTTFRIEAIPPRLAPIPAKPLLLDGAFNLHLQFPDLSAR 742
            E+ P+LSL I + IK  Q+ +GLRHGDY +YR YCSRRL R+R  +    T GKG+ + K+ L  +  ++A  L +PL  AER+WAFAMQLK++   ++   +   +HL+ RL+KAA+W++ L  LCA   D+RT LEA AY+AFM GNV LE+E+W  AL    +   +C EL +V       L+   A E+EPS+R+C YNL + GG   + E+ ++ D  +       +L +KL  V++E R +QA++L  V     RIP+R      G S    A  E  R  E   +  G    + D   AL  ++    +D       E    + +   A+       L  L A     KL    +RN  L+  L++     GS  R    D+V LY A++  + EM+                          E+EA + ++ A  A  +A RC++++E+Y    KW+EA AL E  A  L + EAL  D A         GA +       +      +  LA  VEG +       YLA           +A  E     D    P    LP   LL+RL  F           D  P EP    +   PPRL P+P KPLL D A N  + +PDL  R
Sbjct:   30 EELPELSLDIIDLIKTAQAQHGLRHGDYGRYRSYCSRRLHRLR--RVTGCTHGKGR-YVKRPLEPESVRDARQLMLPLFCAERAWAFAMQLKRE---NTQQEARPHYHLLARLAKAAEWSAKLAALCAERADQRTDLEAKAYSAFMHGNVALERENWAPALASFKSTATICTELARVTMAEQAALYKQVAAEVEPSIRFCSYNLRRLGGEEVSDETDAMGDDVDGLAGASDILRSKLEQVLAETRAKQAESLTEVVVLGERIPLRTDKTRLGYSAVQQALLEVQRCEEGGGKEAGDKADKGDDLLALYDKLFVACNDALDSVRLELRETKKREQSAKSGAAEASLLTLQAALLWQKLHHTARRNLLLLGRLREGKGPAGSRKRATPEDLVRLYDAVLATLDEMRSL--------------------HGYKENEALMGQLAARSAVAKAHRCYWVAESYGAVSKWREAEALYERAAALLSEAEALLDDDAAQGGAADELGAPSADCGGFGQGEDAAALAALAEAVEGAKAXXXXXXYLASL---------EAAGEAPAEADGAGGP----LP---LLQRLDRF-----------DAKPDEP----LYEFPPRLEPVPCKPLLFDIARN-QITYPDLGPR 609          
BLAST of jgi.p|Trimin1|346319 vs. uniprot
Match: A0A388L0E0_CHABU (Signal recognition particle subunit SRP68 n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388L0E0_CHABU)

HSP 1 Score: 228 bits (581), Expect = 1.620e-61
Identity = 212/646 (32.82%), Postives = 307/646 (47.52%), Query Frame = 0
Query:  130 LSLRIHETIKEKQSANGLRHGDYLQYRHYCSRRLRRVRTNKQVKFTFGKGKQFTKKTLTLDMAKNAAFLEIPLMFAERSWAFAMQLKQDLGSSSSTSSAERHHLMRRLSKAAKWASDLETLCAAAGDERTALEACAYAAFMCGNVLLEKES-WGGALEKLTTVHRVCRELGQVGDLADQDLFSARAEEIEPSVRYCKYNLSKAGGATTATESFSLDQQNXXXXXXXLLAAKLASVVSEARLQQAKALAHVDWQARRIPVRGQGLSVALIAAREASRGLEAALRTGGGVGGRNDALSVRVLNGWDDVAGEAAKETAALQGKGGGARVEGQRMELALLSAYAKHSKLRLMVKRNEALVEG-----LKQASTGGSEPRNA-----------DIVHLYKALMQNVREMKDCLSVAAAATDLASSESADMXXXXXXEHEAALAEVEADEAWYRACRCFYLSEAYAEQGKWQEASALLESHAPSLCDEA------------LDKAE--DLADVQREGAKTQTLTRTDRIKELASMVEG--GRLRAAASLYLAPHTEPKEQVDQDANEEGDEHEDSGTSPASEALPDRTLLERLYDFDDGADSTPAPADGSPAEPTTFRIEAIPPRLAPIPAKPLLLDGAFNLHLQFPDLSAR 742
            LS+ + +TIK  Q+ +GLRHGDY +YR YC+ RLRR+   K +KF  G+GK + KKT+   M  +  +L IPL  AER+W +AM+LKQ  G     SS +R HL+RRL+KAA+W   L  LC+   D RTALEA AYA++M GNV LE+E  W GAL K      V  +LG+VG++  Q L   R EE+EPSVRYC Y + ++ G      S ++D          LL +KL +V++E R +QA  +  + W  RRIP+      + ++  +E  + L+ A  T   +  R  AL  ++   + +      ++     G     R    R E++ L A      L   ++RN+ LV       LKQ +  G E + A           D+V LY AL+QNV              DLA  E  D       E E A  ++      ++A RCFYL ++YA   K+ EA  LL   A     EA            +D+A   ++ DV  +    + L   D   + AS  +G  G +    SL +      KE       +EG + + +              L  + D  + A  + A A    A P   RI  IPP    +P +PL+L+ A +  +QFP L  R
Sbjct:   24 LSIPVLQTIKAAQAQHGLRHGDYQRYRRYCTARLRRL--YKSLKFLHGRGK-YVKKTIEPAMVADIRYLLIPLYCAERAWGYAMELKQLPGG---PSSRQRFHLIRRLTKAARWGDVLAALCSEKADSRTALEAEAYASWMWGNVKLEREDDWEGALVKFLRARTVYEQLGKVGNMEHQVLCRQRVEELEPSVRYCNYKMGRSKGGDLLEMSRAMD-----GPALDLLQSKLEAVMAEDRARQAAQMEELTWHGRRIPLNNAKTRLCILRGQELDKELQVADSTPIPLE-RKLALYDKIFVEYQEAKRHVREDLNVAGGMAAAPREV--RDEISTLDAALTTLLLHRTIERNQLLVSSAQAKLLKQQTQRGKEDKAAAGEKEKAVRPEDLVRLYDALIQNV-------------ADLAQVEVRDRRR----EDEEAEKQLAVKRLCFQAFRCFYLGQSYAAASKFAEAY-LLYKRAEEYAAEAGRAGKEGMMSGGVDEAMMLEVQDVANQARAQRCLVHADGAMQNASTADGIGGLVERVGSLSI------KENAPTAMTKEGQQQDQTAG----------VYLTDMLDRFESAVGSSAAAGRRDAPP---RIAQIPPSFRSVPCEPLMLNTALSA-IQFPSLDHR 617          
BLAST of jgi.p|Trimin1|346319 vs. uniprot
Match: A0A7S0IRP5_9EUKA (Signal recognition particle subunit SRP68 n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IRP5_9EUKA)

HSP 1 Score: 228 bits (581), Expect = 4.070e-61
Identity = 208/635 (32.76%), Postives = 297/635 (46.77%), Query Frame = 0
Query:  118 GSMEVESEQAPKLSLRIHETIKEKQSANGLRHGDYLQYRHYCSRRLRRVRTNKQVKFTFGKGKQFTKKTLTLDMAKNAAFLEIPLMFAERSWAFAMQLKQDLGSSSSTSSAERHHLMRRLSKAAKWASDLETLCAAAGDERTALEACAYAAFMCGNVLLEKESWGGALEKLTTVHRVCRELGQVGDLADQ-DLFSARAEEIEPSVRYCKYNLSKAGGATTATESFSLDQQNXXXXXXXLLAAKLASVVSEARLQQAKALAHVDWQARRIPVRGQGLSVALIAAREASRGLEAALRTGGGVGGRNDALSV---RVLNGWDDVAGEAAKETAALQGKGGGARVEGQRMELALLSAYAKHSKLRLMVKRNEALVEGLKQASTGGSEPRNADIVHLYKALMQNVREMKDCLSVAAAATDLASSESADMXXXXXXEHEAALAEVEADEAWYRACRCFYLSEAYAEQGKWQEASALLESHAPSLCDEALDKAEDLADVQREGAKTQTLTRTDR------IKELASMVEGGRLRAAASLYLAPHTEPKEQVDQDANEEGDEHEDSGTSPASEALPDRTLLERLYDFDDGADSTPAPADGSPAEPTTFRIEAIPPRLAPIPAKPLLLDGAFNLHLQFPDLSAR 742
            G +    E+  ++SL I + I+  Q+A+GLRHGDY +YR YCSRRL R+R  K +K T GKG+ F K+ L   + +    L + L  AER+WA+AMQLK++   +        +HL+ RL+KAA W+S L  LCA+ GD+RT LEA AY AFM GN+ LE+E W  AL        +C EL +V  LADQ  L+     E+EPS+R+C YNL +   A      F  D          +L +KL  V+ E R +QAK L  +D    R+P++     V+++ +++    L  A   GGG    +DAL     ++   ++D   E+ +       K   AR       L  L A     KL   V+R   LVE L+ A  G       D+V LY +++  + +M                           E E  + EV A  A  +A RC+Y +E+Y    KW EA  L E  A  L  EA+    D      + A+        R      +++L ++VEG + RA A   LA        V   + E G    DS  +  +  +P   LL+RL  F             +  E    R+   PPRL  +  KP+L D A N  +  PDLSAR
Sbjct:   76 GLVHEAMEEMEEVSLDIFDVIRSSQAAHGLRHGDYGRYRAYCSRRLHRLR--KALKMTHGKGR-FAKRPLEPQLVREPRHLMLVLFCAERAWAYAMQLKRE---NIQQEPRPHYHLLSRLAKAALWSSKLAALCASRGDKRTELEANAYEAFMAGNMHLERERWSPALGAFKRCSTICSELCRVS-LADQVHLYRTMVAEVEPSIRFCTYNLRQGEAADAKDGEF--DDIVGAEGASDILRSKLEHVLQETRAKQAKDLNEMDVLNERVPIKNDKTRVSILRSQQLLLELHEAGADGGGAEAGDDALMSLFDKLFVEYNDAL-ESVRSDLRQAAKEHSARAGASETTLLKLHAALLWQKLHHTVRRTLILVERLRSAG-GKKRASPEDLVRLYDSVLNTLGDMSQL--------------------DGYKEDERLMGEVAARAACAKAHRCYYTAESYGTVDKWAEAQVLYE-RAGVLLGEAMQLYSDAMGDDPQAAQAGEPPAFGRGEDGAALQQLVALVEGAKARAQAQAVLAILRGGSPAVVDASREMGRIALDSAPAAVAADVP---LLQRLDQF-----------HATDHE----RLIDFPPRLETVACKPILFDIARN-QITLPDLSAR 659          
BLAST of jgi.p|Trimin1|346319 vs. uniprot
Match: A0A7M7GKA6_STRPU (Signal recognition particle subunit SRP68 n=2 Tax=Echinacea TaxID=7674 RepID=A0A7M7GKA6_STRPU)

HSP 1 Score: 222 bits (566), Expect = 1.240e-59
Identity = 193/660 (29.24%), Postives = 305/660 (46.21%), Query Frame = 0
Query:  123 ESEQAPKLSLRIHETIKEKQSANGLRHGDYLQYRHYCSRRLRRVRTNKQVKFTFGKGKQFTKKTLTLDMAKNAAFLEIPLMFAERSWAFAMQLKQDLGSSSSTSSAERHHLMRRLSKAAKWASDLETLCAAAG-DERTALEACAYAAFMCGNVLLEKESWGGALEKLTTVHRVCRELGQVGDLADQDLFSARAEEIEPSVRYCKYNLSKAGGATTATESFSLDQQNXXXXXXXLLAAKLASVVSEARLQQAKALAHVDWQARRIPVRGQGLSVALIAAREASRGLEAALRTGGGVGGRNDALSVRVLNGWDDVAGEAAKETAALQGKGGGARVEGQRMELALLSAYAKHSKLRLMVKRNEALVEGLK---QASTGGSEPRNA--------DIVHLYKALMQNVREMKDCLSVAAAATDLASSESADMXXXXXXEHEAALAEVEADEAWYRACRCFYLSEAYAEQGKWQEASALLESHAPSLCDEALDKAEDLADVQREGAKTQTLTRTDRIKELASMVEGGRLRAAASLYLAPHTEPKEQVDQDANEEGDEHEDSGTSPASEALPDRTLLERLYDFDDGADSTPAPADGSPAEPTTFRIEAIPPRLAPIPAKPLLLDGAFNLHLQFPDLSARAGAPEAAATAANTRGSLTGLVRWAFGRG 770
            +S Q    +L +   IKE Q  +GLRHGDY +YR YC+RRLRRVR  K +KF++G   +F K+ +  ++ K+  FL +PL+ AERSWA+AMQLK +     +T   +R H+M RL KA K+A++LE L  +   D R+ LEA AY  +M G VL E+E W   +E L+    +  +L    +     ++  R EEI PS+RYC YN+          ES   D           ++  + S++++ R +QA  L+ V W+ R +PVR + +   L+  +E  + + + +          ++L ++  +    +  E   +  A   K  G R +G       L  Y  + +L   ++RN  L E LK   Q    G E  +A        D++ L   ++QN+ E+     +     D+   +                 EVEA    ++A RCFYL+++Y++  KW EA+AL E         A+ +AE      +             + EL   + G +  A A+  L            D++E  +       + +S +   R + ERL D+         PA  S  +PT   + A PP   P+P KPL  D A N HL+FP L  +    +AA    N +G + G +   +G G
Sbjct:   13 QSGQGLTFTLEVLSIIKESQLQHGLRHGDYQRYRSYCTRRLRRVR--KSLKFSYGNRNKFVKRQIKEEIVKDVRFLYLPLVCAERSWAYAMQLKTE----GNTEPRKRFHVMSRLRKAVKFAAELEALSQSDKCDARSKLEAKAYFGYMKGMVLFEEEKWENCIETLSEAKTIYEKLASALNEEQSAIYLQRVEEISPSIRYCAYNIGD--------ESAINDLVKMRLKSGGQMSTNIDSLLAQTREKQAATLSEVTWRGRTVPVRNEQVRAFLLTCQENEQQVSSEITDSESKVSVYESLLMQCKDSLQIIREELKADPNA---KAKGQRQDGPVSTTQYLHTYLTYIRLTRTIERNILLAETLKANLQTREDGGEQESANQKRTKPQDLIRLCDIILQNLSEIPQLPGLEG---DVELQQ-----------------EVEAKTLKFKAYRCFYLAQSYSQAKKWTEAAALFER--------AMSRAESSRKEWKAIKSISVKAELTELDELIQQINGVKYSAHAASIL------------DSSEVNESMAKLNITASSSSDTSRPVSERLGDY--------RPA--SEVDPTKPNLVAFPPAFKPVPCKPLFFDIALN-HLEFPSLEDKLETNKAA----NAKGGIGGFLSGWWGGG 600          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|346319 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CNG0_9STRA0.000e+0100.00Signal recognition particle subunit SRP68 n=1 Tax=... [more]
D8LF41_ECTSI1.100e-13744.18Signal recognition particle subunit SRP68 n=2 Tax=... [more]
A0A7S2BZZ1_9STRA1.520e-8935.77Signal recognition particle subunit SRP68 n=1 Tax=... [more]
A0A7S2B7L4_9STRA1.140e-8232.88Signal recognition particle subunit SRP68 n=1 Tax=... [more]
A0A6A7G753_9CRUS3.460e-6733.02Signal recognition particle subunit SRP68 n=2 Tax=... [more]
A0A2P6VBQ7_9CHLO8.670e-6633.54Signal recognition particle subunit SRP68 n=1 Tax=... [more]
A0A7S3T9Z8_EMIHU2.210e-6232.92Signal recognition particle subunit SRP68 n=3 Tax=... [more]
A0A388L0E0_CHABU1.620e-6132.82Signal recognition particle subunit SRP68 n=1 Tax=... [more]
A0A7S0IRP5_9EUKA4.070e-6132.76Signal recognition particle subunit SRP68 n=1 Tax=... [more]
A0A7M7GKA6_STRPU1.240e-5929.24Signal recognition particle subunit SRP68 n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026258Signal recognition particle subunit SRP68PFAMPF16969SRP68coord: 147..731
e-value: 5.8E-117
score: 392.0
IPR026258Signal recognition particle subunit SRP68PANTHERPTHR12860SIGNAL RECOGNITION PARTICLE 68 KDA PROTEINcoord: 123..757
IPR038253SRP68, N-terminal domain superfamilyGENE3D1.10.3450.40coord: 128..330
e-value: 2.0E-64
score: 219.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 638..707
IPR034652Signal recognition particle subunit SRP68, RNA-binding domainCDDcd15481SRP68-RBDcoord: 133..326
e-value: 1.51879E-51
score: 176.261

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_1contigContig_1:175173..184185 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|346319mRNA_947Tribonema minus UTEX_B_3156 mRNAContig_1 175173..184269 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|346319|estExt_Genemark1.C_Ctg_10055 ID=Trimin1|346319|estExt_Genemark1.C_Ctg_10055|Name=jgi.p|Trimin1|346319|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=771bp
MGEKGVMYVELPAGGEDIESLWLTKVYAACGVQAQAGEDLSESLVLQTAL
LQLKRAREQRQHKHAQLLPGAERAVGDDPSDMMPVFVTDLTSRTGLDQLY
QLLLLFKQRVLSGNLGTGSMEVESEQAPKLSLRIHETIKEKQSANGLRHG
DYLQYRHYCSRRLRRVRTNKQVKFTFGKGKQFTKKTLTLDMAKNAAFLEI
PLMFAERSWAFAMQLKQDLGSSSSTSSAERHHLMRRLSKAAKWASDLETL
CAAAGDERTALEACAYAAFMCGNVLLEKESWGGALEKLTTVHRVCRELGQ
VGDLADQDLFSARAEEIEPSVRYCKYNLSKAGGATTATESFSLDQQNDGG
GGGGLLAAKLASVVSEARLQQAKALAHVDWQARRIPVRGQGLSVALIAAR
EASRGLEAALRTGGGVGGRNDALSVRVLNGWDDVAGEAAKETAALQGKGG
GARVEGQRMELALLSAYAKHSKLRLMVKRNEALVEGLKQASTGGSEPRNA
DIVHLYKALMQNVREMKDCLSVAAAATDLASSESADMDVDVDDEHEAALA
EVEADEAWYRACRCFYLSEAYAEQGKWQEASALLESHAPSLCDEALDKAE
DLADVQREGAKTQTLTRTDRIKELASMVEGGRLRAAASLYLAPHTEPKEQ
VDQDANEEGDEHEDSGTSPASEALPDRTLLERLYDFDDGADSTPAPADGS
PAEPTTFRIEAIPPRLAPIPAKPLLLDGAFNLHLQFPDLSARAGAPEAAA
TAANTRGSLTGLVRWAFGRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026258SRP68
IPR038253SRP68_N_sf
IPR034652SRP68-RBD