Trimin1|346308|estExt_Genemark1.C_Ctg_10003 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|346308
Unique NameTrimin1|346308|estExt_Genemark1.C_Ctg_10003
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length767
Homology
BLAST of jgi.p|Trimin1|346308 vs. uniprot
Match: A0A835YTA0_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTA0_9STRA)

HSP 1 Score: 1373 bits (3555), Expect = 0.000e+0
Identity = 744/821 (90.62%), Postives = 745/821 (90.74%), Query Frame = 0
Query:    1 MARWARQWPSPEAKRQHRAALARARCRTHVARLRANHDLLRSRRERHLAAQKRWLAKQRGGAGGEXXDRSTGGPEPPYPPEQQAGEDGGTGTKEEEFLSVPDEARRPSSPPSVXXXXXXXRVDAGEAGADVPPRGEGDEAAEPAPAEPAAAEGEWWEEERGPSSPPPYLKDGYCPFRGLRASPPCARYYVDDPVYERLRLALERLVPGYELLAASSCSSDLLGLVHQWATCFGGETAGACLDLASAGGRGLPGRTCAARPRVDREAEGLRPKEQVLRLLGEEGRKSGSASFVDAWRSGAVQTAFVEHVRRRLVEDSPKPTILFLETAPVYYDACLTGGTLRALASLCARQGVALVTDEVMLSVRCGRPLSSDYARSFRPDAAVLGSKALGSAFVVVRRLSPLKHAFRSQPMMVGQEISAEAAEAAVRAIDYILREDLMGYIAGEGEARRRAAGASGAGYLWHDAPREVASAFRR--------------------EGAAEETVADRPPPXXTADEGRAARSRRSPLPSSPLAPLASEHVSADLSESITRGGLGCGSEYLIDYGRRALLQKANAPLLRHGRAFTPGWPDMSRPVNARRFSFRVRDTHGRLDAPGFARRALGLKIGNPRRPSEPVSEVRYCEEGEGWAFSVRCHPGSANVRRHLVECLPAPFREGWDLQTEDPNLGTSPDGREVFVERWAGRATVSSELGTEERRSRKRK-----------------------------------EGRRLQSRDARANISPARARAAPTAETSGPAASAVASVTVPALAPAXAAEGNRRDLEEAEXXXXDQDCI 766
            MARWARQWPSPEAKRQHR ALARARCRTHVARLRAN DLLRSRRERHLAAQKRWLAKQRGGAGGEXX RSTGGPEPPYPPEQQAGEDGGTGTKEEEFLSVPDEARRPSSPPSVXXXXXXXRVDAGEAGADVPPRGEGDEAAEPAPAEPAAAEGEWWEEERGPSSPPPYLKDGYCPFRGLRASPPCARYYVDDPVYERLRLALERLVPGYELLAASSCSSDLLGLVHQWATCFGGETAGACLDLASAGGRGLPGRTCAARPRVDREAEGLRPKEQVLRLLGEEGRKSGSASFVDAWRSGAVQTAFVEHVRRRLVEDSPKPTILFLETAPVYYDACLTGGTLRALASLCARQGVALVTDEVMLSVRCGRPLSSDYARSFRPDAAVLGSKALGSAFVVVRRLSPLKHAFRSQPMMVGQEISAEAAEAAVRAIDYILREDLMGYIAGEGEARRRAAGASGAG LWHDAPREVASAF                      EGAAEETVADRPP XXTADEGRA RSRRSPLPSSPLAPLASEHVSADLSES TRGGLGCGSEYLIDYGRR LLQKANAPLLRHGRAFTPGWPDMSRPVNARRFSFRVRDTHGRLDAPGFARRALGLKIGNPRRPSEPVSEVRYCEEGEGWAFSVRCHPGSANVRRHLVECLPAPFREGWDLQTEDPNLGTS DGREVFVERWAGRATVS ELGTEERR  + K                                   EGRRLQSRDARANISPARARAAPTAETSGPAASAVASVTVPALAPA AAEGNRRDLEEAE    DQD I
Sbjct:    1 MARWARQWPSPEAKRQHRVALARARCRTHVARLRANPDLLRSRRERHLAAQKRWLAKQRGGAGGEXXXRSTGGPEPPYPPEQQAGEDGGTGTKEEEFLSVPDEARRPSSPPSVXXXXXXXRVDAGEAGADVPPRGEGDEAAEPAPAEPAAAEGEWWEEERGPSSPPPYLKDGYCPFRGLRASPPCARYYVDDPVYERLRLALERLVPGYELLAASSCSSDLLGLVHQWATCFGGETAGACLDLASAGGRGLPGRTCAARPRVDREAEGLRPKEQVLRLLGEEGRKSGSASFVDAWRSGAVQTAFVEHVRRRLVEDSPKPTILFLETAPVYYDACLTGGTLRALASLCARQGVALVTDEVMLSVRCGRPLSSDYARSFRPDAAVLGSKALGSAFVVVRRLSPLKHAFRSQPMMVGQEISAEAAEAAVRAIDYILREDLMGYIAGEGEARRRAAGASGAGDLWHDAPREVASAFPAYTRGSRVLLPLDYRFPPDGGEGAAEETVADRPPXXXTADEGRATRSRRSPLPSSPLAPLASEHVSADLSESSTRGGLGCGSEYLIDYGRRGLLQKANAPLLRHGRAFTPGWPDMSRPVNARRFSFRVRDTHGRLDAPGFARRALGLKIGNPRRPSEPVSEVRYCEEGEGWAFSVRCHPGSANVRRHLVECLPAPFREGWDLQTEDPNLGTSTDGREVFVERWAGRATVSPELGTEERRVSEAKRYPWTRECAVGGVRQADEGPGAIRQDARSGAASLREGRRLQSRDARANISPARARAAPTAETSGPAASAVASVTVPALAPAPAAEGNRRDLEEAESDDDDQDYI 821          
BLAST of jgi.p|Trimin1|346308 vs. uniprot
Match: A0A835Z2G4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2G4_9STRA)

HSP 1 Score: 697 bits (1799), Expect = 2.960e-241
Identity = 406/555 (73.15%), Postives = 419/555 (75.50%), Query Frame = 0
Query:    1 MARWARQWPSPEAKRQHRAALARARCRTHVARLRANHDLLRSRRERHLAAQKRWLAKQRGGAGGEXXDRSTGGPEPPYPPEQQAGEDGGTGTKEEEFLSVPDEARRPSSPPSVXXXXXXXRVDAGEAGADVPPRGE----------------------GDEAAEPAPAEPAAAEGEWWEEERGPSSPPPYLKDGYCPFRGLRASPPCARYYVDDPVYERLRLALERLVPGYELLAASSCSSDLLGLVHQWATCFGGETAGACLDLASAGGRGLPGRTCAARPRVDREAEGLRPKEQVLRLLGEEGRKSGS--ASFVDAWRSGAVQTAFVEHVRRRLVEDSPKPTILFLETAPVYYDACLTGGTLRALASLCARQGVALVTDEVMLSVRCGRPLSSDYARSFRPDAAVLGSKALGSAFVVVRRLSPLKHAFRSQPMMVGQEISAEAAEAAVRAIDYILREDLMGYIAGEGEARRRAAGASGAGYLWHDAPREVASAFRR--------------------EGAAEETVADRPPPXXTADEGRAARSRRSPLPSSPLA 511
            MARWARQWPS  AKR HRAALARAR R H ARLRAN DLL+ RRE H  AQ+R LA+QR        +RS GGPEPP P EQ+AGE+       +    VPD  ++P SPP+V       RV     G DV                           GD  AEPA   PAAA  E WE+ERGPSSPPPYLKDGYCPFRGLRASPPCARYYVDDPVYERLRLALERLVPGYELLAASSCSSDLLGLVHQWATCFGGETAG CLDLASAGGRGLPGRTCAARPRVDREAEGLRPKEQVLRLLG EGRK G   ASFVDAWRSGAVQTAFVEHVRRRL EDSPKPTIL LETAPVYYDACLTGGTLRALASLCARQGVALVTDEVMLSVRCGRPLSSDYARSFRPDAAVLGSKALGSAFVVVRR SPLKHAFRSQPMMVGQEISA AAEAAVRAIDYILREDLM YIAGEGEARRRAAGASGAGYLWHDAPRE ASAF                      EGA    VADR PP   A E RA RS    L ++P A
Sbjct:    1 MARWARQWPSESAKRHHRAALARARNRVHAARLRANPDLLKRRRELHREAQRRCLARQRELLRAGSGNRSDGGPEPPTPREQRAGEEERAEATADGIPPVPDGVQQPPSPPAVPEPARPERVV--REGDDVAAXXXXXXXXXXXXXXXXXXXXXXXXXGD--AEPADG-PAAAAAERWEDERGPSSPPPYLKDGYCPFRGLRASPPCARYYVDDPVYERLRLALERLVPGYELLAASSCSSDLLGLVHQWATCFGGETAGVCLDLASAGGRGLPGRTCAARPRVDREAEGLRPKEQVLRLLGGEGRKGGCGPASFVDAWRSGAVQTAFVEHVRRRLAEDSPKPTILLLETAPVYYDACLTGGTLRALASLCARQGVALVTDEVMLSVRCGRPLSSDYARSFRPDAAVLGSKALGSAFVVVRRQSPLKHAFRSQPMMVGQEISAAAAEAAVRAIDYILREDLMAYIAGEGEARRRAAGASGAGYLWHDAPREAASAFPAYARGTRVLLPLDYRFPPEGGEGAVPPFVADRSPPAPAAGERRATRSGSRSLVATPPA 550          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|346308 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835YTA0_9STRA0.000e+090.62Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835Z2G4_9STRA2.960e-24173.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015421Pyridoxal phosphate-dependent transferase, major domainGENE3D3.40.640.10coord: 227..432
e-value: 1.2E-7
score: 33.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 685..705
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 684..766
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 472..516
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..141
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 305..452

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_1contigContig_1:5357..8353 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|346308mRNA_894Tribonema minus UTEX_B_3156 mRNAContig_1 5357..8353 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|346308|estExt_Genemark1.C_Ctg_10003 ID=Trimin1|346308|estExt_Genemark1.C_Ctg_10003|Name=jgi.p|Trimin1|346308|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=767bp
MARWARQWPSPEAKRQHRAALARARCRTHVARLRANHDLLRSRRERHLAA
QKRWLAKQRGGAGGEGGDRSTGGPEPPYPPEQQAGEDGGTGTKEEEFLSV
PDEARRPSSPPSVPESPRSERVDAGEAGADVPPRGEGDEAAEPAPAEPAA
AEGEWWEEERGPSSPPPYLKDGYCPFRGLRASPPCARYYVDDPVYERLRL
ALERLVPGYELLAASSCSSDLLGLVHQWATCFGGETAGACLDLASAGGRG
LPGRTCAARPRVDREAEGLRPKEQVLRLLGEEGRKSGSASFVDAWRSGAV
QTAFVEHVRRRLVEDSPKPTILFLETAPVYYDACLTGGTLRALASLCARQ
GVALVTDEVMLSVRCGRPLSSDYARSFRPDAAVLGSKALGSAFVVVRRLS
PLKHAFRSQPMMVGQEISAEAAEAAVRAIDYILREDLMGYIAGEGEARRR
AAGASGAGYLWHDAPREVASAFRREGAAEETVADRPPPPPTADEGRAARS
RRSPLPSSPLAPLASEHVSADLSESITRGGLGCGSEYLIDYGRRALLQKA
NAPLLRHGRAFTPGWPDMSRPVNARRFSFRVRDTHGRLDAPGFARRALGL
KIGNPRRPSEPVSEVRYCEEGEGWAFSVRCHPGSANVRRHLVECLPAPFR
EGWDLQTEDPNLGTSPDGREVFVERWAGRATVSSELGTEERRSRKRKEGR
RLQSRDARANISPARARAAPTAETSGPAASAVASVTVPALAPAPAAEGNR
RDLEEAESDDDDQDCI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015421PyrdxlP-dep_Trfase_major
IPR015424PyrdxlP-dep_Trfase