Trimin1|34294|CE34293_81 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|34294
Unique NameTrimin1|34294|CE34293_81
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length223
Homology
BLAST of jgi.p|Trimin1|34294 vs. uniprot
Match: A0A835Z4W6_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4W6_9STRA)

HSP 1 Score: 430 bits (1105), Expect = 4.360e-152
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
Query:    1 MGSPTKRRDMDMMKLMMSDFAVHIPDECSMHDFMVAFPGPANTPYEGGVWKVHVSLPREYPYRSPSIGFENRIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFTIFLPQLLAYPNPTDPLNSEAAALMLRDPKAYGARIRESVRLHASRAITFDDXXXXXXXXCGRGAQRMGSATSAKSDGTFGSPSTASLSGSSQVSGECARLQVWRGDMERGRRVSRNA 222
            MGSPTKRRDMDMMKLMMSDFAVHIPDECSMHDFMVAFPGPANTPYEGGVWKVHVSLPREYPYRSPSIGFENRIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFTIFLPQLLAYPNPTDPLNSEAAALMLRDPKAYGARIRESVRLHASRAITFDDXXXXXXXXCGRGAQRMGSATSAKSDGTFGSPSTASLSGSSQVSGECARLQVWRGDMERGRRVSRNA
Sbjct:    1 MGSPTKRRDMDMMKLMMSDFAVHIPDECSMHDFMVAFPGPANTPYEGGVWKVHVSLPREYPYRSPSIGFENRIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFTIFLPQLLAYPNPTDPLNSEAAALMLRDPKAYGARIRESVRLHASRAITFDDXXXXXXXXCGRGAQRMGSATSAKSDGTFGSPSTASLSGSSQVSGECARLQVWRGDMERGRRVSRNA 222          
BLAST of jgi.p|Trimin1|34294 vs. uniprot
Match: D7G096_ECTSI (Ubiquitin-conjugating enzyme type E2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G096_ECTSI)

HSP 1 Score: 270 bits (690), Expect = 8.190e-88
Identity = 124/153 (81.05%), Postives = 140/153 (91.50%), Query Frame = 0
Query:    3 SPTKRRDMDMMKLMMSDFAVHIPDECSMHDFMVAFPGPANTPYEGGVWKVHVSLPREYPYRSPSIGFENRIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFTIFLPQLLAYPNPTDPLNSEAAALMLRDPKAYGARIRESVRLHASRAITFD 155
            SP+KRRD DMMKLMMSDF VHIPDE SMHDF+VAFPGP +TPY+GGVWKVHV+LP+EYP++SPSIGFENR++HPNVDEMSGSVCLDVINQTWSPMFDLVNIF +F+PQLL+YPNPTDPLN EAAAL++RDPKAY  RIRE VRLHAS  +  D
Sbjct:    5 SPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHLD 157          
BLAST of jgi.p|Trimin1|34294 vs. uniprot
Match: A0A7S2AI60_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AI60_9STRA)

HSP 1 Score: 238 bits (608), Expect = 1.160e-76
Identity = 111/152 (73.03%), Postives = 128/152 (84.21%), Query Frame = 0
Query:    1 MGSPTKRRDMDMMKLMMSDFAVHIPDECSMHDFMVAFPGPANTPYEGGVWKVHVSLPREYPYRSPSIGFENRIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFTIFLPQLLAYPNPTDPLNSEAAALMLRDPKAYGARIRESVRLHASRAI 152
            M +P KRR  DMMKLMMSD+ V+IPDE SMHDF V F GP +TPYEGGVWK+HV+LP  YP++SPSIGF+NR++HPNVD++SGSVCLDVINQTWSPMF+LVNIF +FLP LL YPNPTDPLN EAAALM+RDP AY  RIRE VR  A+  I
Sbjct:    4 MVTPNKRRHQDMMKLMMSDYEVNIPDESSMHDFFVKFEGPPDTPYEGGVWKIHVTLPPAYPFKSPSIGFKNRMFHPNVDDISGSVCLDVINQTWSPMFNLVNIFEVFLPHLLRYPNPTDPLNGEAAALMMRDPDAYALRIREHVRQFATARI 155          
BLAST of jgi.p|Trimin1|34294 vs. uniprot
Match: A0A7S2W0L0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0L0_9STRA)

HSP 1 Score: 239 bits (609), Expect = 1.800e-76
Identity = 111/148 (75.00%), Postives = 128/148 (86.49%), Query Frame = 0
Query:    5 TKRRDMDMMKLMMSDFAVHIPDECSMHDFMVAFPGPANTPYEGGVWKVHVSLPREYPYRSPSIGFENRIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFTIFLPQLLAYPNPTDPLNSEAAALMLRDPKAYGARIRESVRLHASRAI 152
            +KR   DMMKLMMSD+ VHIP+E S+H+F V F GPA TPYEGGVWKVHV LPR+YP++SPSIGF+NRIYHPNVD++SGSVCLDVINQTWSPMF+LVNIF IFLPQLL YPNPTDPLN EA ALM+RDP+AY +RIR+ VR  AS  +
Sbjct:   20 SKRMHRDMMKLMMSDYEVHIPNEQSVHEFFVKFHGPAETPYEGGVWKVHVMLPRDYPFKSPSIGFKNRIYHPNVDDLSGSVCLDVINQTWSPMFNLVNIFEIFLPQLLRYPNPTDPLNGEAGALMMRDPEAYASRIRDYVRSFASSTV 167          
BLAST of jgi.p|Trimin1|34294 vs. uniprot
Match: A0A8K1C4X5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4X5_PYTOL)

HSP 1 Score: 231 bits (589), Expect = 2.780e-74
Identity = 105/152 (69.08%), Postives = 129/152 (84.87%), Query Frame = 0
Query:    1 MGSPTKRRDMDMMKLMMSDFAVHIPDECSMHDFMVAFPGPANTPYEGGVWKVHVSLPREYPYRSPSIGFENRIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFTIFLPQLLAYPNPTDPLNSEAAALMLRDPKAYGARIRESVRLHASRAI 152
            MGS  KRR+ D+MKLMMSD+ V + DE   +DF V F GPA TPYEGGVWK+HVSLP+EYP++SPSIGF NRIYHPNVD+MSGSVCLDVINQTWSPMF+LVN+F +F+PQLL YPNP+DPLN EAA+L+++D  AY A+++E VR +AS+ I
Sbjct:    1 MGSMNKRRETDVMKLMMSDYEVQLTDETKTNDFHVKFHGPAETPYEGGVWKIHVSLPKEYPFKSPSIGFVNRIYHPNVDDMSGSVCLDVINQTWSPMFELVNVFEVFIPQLLRYPNPSDPLNGEAASLLMKDADAYNAKVKEYVRNYASQPI 152          
BLAST of jgi.p|Trimin1|34294 vs. uniprot
Match: A0A2D4C6N9_PYTIN (Ubiquitin-conjugating enzyme E2, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6N9_PYTIN)

HSP 1 Score: 228 bits (580), Expect = 6.280e-73
Identity = 104/150 (69.33%), Postives = 129/150 (86.00%), Query Frame = 0
Query:    3 SPTKRRDMDMMKLMMSDFAVHIPDECSMHDFMVAFPGPANTPYEGGVWKVHVSLPREYPYRSPSIGFENRIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFTIFLPQLLAYPNPTDPLNSEAAALMLRDPKAYGARIRESVRLHASRAI 152
            S  KRR+ D+MKLMMS++ VH+ DE   +DF V F GP +TPYEGG+WK+HVSLP+EYP++SPSIGF NRIYHPNVD+MSGSVCLDVINQTWSPMFDL+NIF +F+PQLL YPNPTDPLN EAA+L+++D +AY A++RE VR +AS+ I
Sbjct:    2 SSNKRREKDVMKLMMSNYDVHLTDESRANDFHVKFHGPKDTPYEGGLWKIHVSLPKEYPFKSPSIGFVNRIYHPNVDDMSGSVCLDVINQTWSPMFDLLNIFDMFIPQLLRYPNPTDPLNGEAASLLMKDIEAYNAKVREYVRNYASQPI 151          
BLAST of jgi.p|Trimin1|34294 vs. uniprot
Match: A0A7S2BA17_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BA17_9STRA)

HSP 1 Score: 231 bits (588), Expect = 1.230e-72
Identity = 107/151 (70.86%), Postives = 124/151 (82.12%), Query Frame = 0
Query:    2 GSPTKRRDMDMMKLMMSDFAVHIPDECSMHDFMVAFPGPANTPYEGGVWKVHVSLPREYPYRSPSIGFENRIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFTIFLPQLLAYPNPTDPLNSEAAALMLRDPKAYGARIRESVRLHASRAI 152
             +P KRR  DMMKLMMSD+ V IPDE  MHDF V F GPA TPYE G WK+HV+LP +YP++SPSIGF+NR++HPNVD++SGSVCLDVINQTWSPMF+LVNIF  FLP LL YPNPTDPLN EAAAL++RDP AY  RIR+ VR +AS  I
Sbjct:   64 SNPNKRRHQDMMKLMMSDYEVLIPDESCMHDFFVKFDGPAETPYENGSWKIHVTLPADYPFKSPSIGFKNRMFHPNVDDISGSVCLDVINQTWSPMFNLVNIFEQFLPHLLRYPNPTDPLNGEAAALLMRDPDAYNLRIRDHVRQYASAKI 214          
BLAST of jgi.p|Trimin1|34294 vs. uniprot
Match: A0A7S3XS74_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XS74_HETAK)

HSP 1 Score: 228 bits (581), Expect = 2.460e-71
Identity = 105/148 (70.95%), Postives = 126/148 (85.14%), Query Frame = 0
Query:    2 GSPTKRRDMDMMKLMMSDFAVHIPDECSMHDFMVAFPGPANTPYEGGVWKVHVSLPREYPYRSPSIGFENRIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFTIFLPQLLAYPNPTDPLNSEAAALMLRDPKAYGARIRESVRLHAS 149
             SP+KRRD D+++LMMSD+ V +PDE  ++DF VAF GP  TPYEGGVW VHV+LP EYPY+SPSIGF NR++HPNVD+MSGSVCLDVINQTWSPMFDL+NIF +FLPQLL  PNPTDPLN EAAAL+LRDP+AY A+++  V  +AS
Sbjct:   82 SSPSKRRDNDLVRLMMSDYEVTLPDEDKIYDFHVAFHGPEKTPYEGGVWDVHVTLPPEYPYKSPSIGFSNRLFHPNVDDMSGSVCLDVINQTWSPMFDLINIFEVFLPQLLQDPNPTDPLNGEAAALLLRDPEAYRAKVQAYVHRYAS 229          
BLAST of jgi.p|Trimin1|34294 vs. uniprot
Match: A0A0D2MML9_9CHLO (Ubiquitin-conjugating enzyme E2 H n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MML9_9CHLO)

HSP 1 Score: 224 bits (571), Expect = 3.340e-71
Identity = 104/151 (68.87%), Postives = 127/151 (84.11%), Query Frame = 0
Query:    2 GSPTKRRDMDMMKLMMSDFAVHIPDECSMHDFMVAFPGPANTPYEGGVWKVHVSLPREYPYRSPSIGFENRIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFTIFLPQLLAYPNPTDPLNSEAAALMLRDPKAYGARIRESVRLHASRAI 152
             SP+KRRDMD+MKLMMSD+ V + D+ ++ +F V F GP ++PYEGGVWKVHV LP  YPY+SPSIGF N+IYHPNVDE +GSVCLDVINQTWSPMFDL+N+F +FLPQLL YPNPTDPLN EAAAL++RDP AY AR++E VR +A+  +
Sbjct:    3 ASPSKRRDMDVMKLMMSDWNVDLVDD-NICEFTVEFGGPKDSPYEGGVWKVHVELPESYPYKSPSIGFVNKIYHPNVDEGAGSVCLDVINQTWSPMFDLINVFEVFLPQLLLYPNPTDPLNGEAAALLMRDPAAYNARVKEYVRRYAAPEV 152          
BLAST of jgi.p|Trimin1|34294 vs. uniprot
Match: A0A6U5AVC9_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A6U5AVC9_HEMAN)

HSP 1 Score: 224 bits (570), Expect = 3.520e-71
Identity = 107/156 (68.59%), Postives = 130/156 (83.33%), Query Frame = 0
Query:    1 MGSPTKRRDMDMMKLMMSDFAVHIPDECSMHDFMVAFPGPANTPYEGGVWKVHVSLPREYPYRSPSIGFENRIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFTIFLPQLLAYPNPTDPLNSEAAALMLRDPKAYGARIRESVRLHASRAITFDD 156
            M SP+KRR+MD+MKLMMSD+ V +  + +M +F V F GP +TPYEGGVWKVHV LP  YPY+SPSIGF NR+YHPNVDEMSGSVCLDVINQ+WSPMFDL+N+F +FLPQLL YPN TDPLN EAAALM+RDP+ Y A+IRE V  +A +A++ +D
Sbjct:    1 MSSPSKRREMDLMKLMMSDYEVQMVKD-NMSEFHVKFHGPKDTPYEGGVWKVHVELPVNYPYKSPSIGFINRMYHPNVDEMSGSVCLDVINQSWSPMFDLINVFEVFLPQLLTYPNATDPLNGEAAALMIRDPEKYRAKIRECVDKYA-QAVSLED 154          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|34294 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z4W6_9STRA4.360e-152100.00Ubiquitin-conjugating enzyme/RWD-like protein n=1 ... [more]
D7G096_ECTSI8.190e-8881.05Ubiquitin-conjugating enzyme type E2 n=1 Tax=Ectoc... [more]
A0A7S2AI60_9STRA1.160e-7673.03Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2W0L0_9STRA1.800e-7675.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8K1C4X5_PYTOL2.780e-7469.08Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4C6N9_PYTIN6.280e-7369.33Ubiquitin-conjugating enzyme E2, putative n=1 Tax=... [more]
A0A7S2BA17_9STRA1.230e-7270.86Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3XS74_HETAK2.460e-7170.95Hypothetical protein n=4 Tax=Heterosigma akashiwo ... [more]
A0A0D2MML9_9CHLO3.340e-7168.87Ubiquitin-conjugating enzyme E2 H n=1 Tax=Monoraph... [more]
A0A6U5AVC9_HEMAN3.520e-7168.59Hypothetical protein n=2 Tax=Hemiselmis TaxID=7792... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 4..149
e-value: 1.1E-42
score: 157.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..197
NoneNo IPR availablePANTHERPTHR24068:SF329UBIQUITIN-CONJUGATING ENZYME E2 4-RELATEDcoord: 3..150
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 3..150
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 2..157
e-value: 8.7E-46
score: 157.4
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 5..148
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 11..143
e-value: 2.3E-36
score: 124.5
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 1..149
score: 38.154385
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 10..144
e-value: 1.23087E-45
score: 146.578
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBC_1coord: 74..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_185contigContig_185:129976..131922 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|34294mRNA_15473Tribonema minus UTEX_B_3156 mRNAContig_185 129546..131961 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|34294|CE34293_81 ID=Trimin1|34294|CE34293_81|Name=jgi.p|Trimin1|34294|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=223bp
MGSPTKRRDMDMMKLMMSDFAVHIPDECSMHDFMVAFPGPANTPYEGGVW
KVHVSLPREYPYRSPSIGFENRIYHPNVDEMSGSVCLDVINQTWSPMFDL
VNIFTIFLPQLLAYPNPTDPLNSEAAALMLRDPKAYGARIRESVRLHASR
AITFDDDDDGGGGGCGRGAQRMGSATSAKSDGTFGSPSTASLSGSSQVSG
ECARLQVWRGDMERGRRVSRNA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
IPR023313UBQ-conjugating_AS