Trimin1|34177|CE34176_63 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|34177
Unique NameTrimin1|34177|CE34176_63
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length184
Homology
BLAST of jgi.p|Trimin1|34177 vs. uniprot
Match: A0A836CIU5_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIU5_9STRA)

HSP 1 Score: 357 bits (917), Expect = 1.020e-124
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
Query:    1 MASSIGALRVGDRAPCCTLPASDFKNVSVPVAGRKTVLAFFPAAFSGGPEKGCECQMATLNKELQELTAAGAAVVGISRELPFTMAAWAQKLGLQFPLLSDSNLKVAQQYVGTVDLGAMIDARTRTRGLAGYLSSNRGVVVVDERGMVIYKYVSTDTQGAPDPGVLPDLGPVKEAVLGARAKL 183
            MASSIGALRVGDRAPCCTLPASDFKNVSVPVAGRKTVLAFFPAAFSGGPEKGCECQMATLNKELQELTAAGAAVVGISRELPFTMAAWAQKLGLQFPLLSDSNLKVAQQYVGTVDLGAMIDARTRTRGLAGYLSSNRGVVVVDERGMVIYKYVSTDTQGAPDPGVLPDLGPVKEAVLGARAKL
Sbjct:    1 MASSIGALRVGDRAPCCTLPASDFKNVSVPVAGRKTVLAFFPAAFSGGPEKGCECQMATLNKELQELTAAGAAVVGISRELPFTMAAWAQKLGLQFPLLSDSNLKVAQQYVGTVDLGAMIDARTRTRGLAGYLSSNRGVVVVDERGMVIYKYVSTDTQGAPDPGVLPDLGPVKEAVLGARAKL 183          
BLAST of jgi.p|Trimin1|34177 vs. uniprot
Match: A0A5B8MH28_9CHLO (Thioredoxin-dependent peroxiredoxin n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MH28_9CHLO)

HSP 1 Score: 146 bits (369), Expect = 1.140e-40
Identity = 78/176 (44.32%), Postives = 113/176 (64.20%), Query Frame = 0
Query:    3 SSIGALRVGDRAPCCTLPASDFKNVSVP-VAGRKTVLAFFPAAFSGGPEKGCECQMATLNKELQELTAAGAAVVGISRELPFTMAAWAQKLGLQFPL-LSDSNLKVAQQYVGTVDLGAMIDARTRTRGLAGYLSSNRGVVVVDERGMVIYKYVSTDTQGAPDPGVLPDLGPVKEAV 176
            ++ G + VGD AP   L A  F+ V +    G+K VLAFFP  FSG  + GC+CQ+    + L+ LT AG +V+G+SR+ PFT  AW  K+G    L LSD NL V+++YVGT + GA +D    ++GL GYL+SNRG + ++E G ++YK+++ D  G   PG LPD+  VK+A+
Sbjct:   67 ATTGRVSVGDAAPEFELLAGGFQQVKLSDYEGKKLVLAFFPCCFSGAVDDGCQCQL----ESLKTLTDAGVSVLGVSRDQPFTQKAWMDKIGNPSLLTLSDFNLDVSEEYVGTFNFGAFLDGLGVSKGLTGYLTSNRGTIAINEEGKIVYKWIALDDAGKSHPGFLPDIEEVKKAL 238          
BLAST of jgi.p|Trimin1|34177 vs. uniprot
Match: A0A7S0X294_9CHLO (Thioredoxin-dependent peroxiredoxin n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0X294_9CHLO)

HSP 1 Score: 142 bits (358), Expect = 2.310e-39
Identity = 76/171 (44.44%), Postives = 110/171 (64.33%), Query Frame = 0
Query:    7 ALRVGDRAPCCTLPASDFKNVSVP-VAGRKTVLAFFPAAFSGGPEKGCECQMATLNKELQELTAAGAAVVGISRELPFTMAAWAQKLGLQFPLLSDSNLKVAQQYVGTVDLGAMIDARTRTRGLAGYLSSNRGVVVVDERGMVIYKYVSTDTQGAPDPGVLPDLGPVKEAV 176
            A+ VGD AP  TL  + F+  ++  + G+K VLAFFPAAFSG  + GC CQ+  L    +E    G  V+GIS++ PFTM AW+  +G++   L+D   +VA+QYVGT DLG  +D    ++G  GY++SNRG VV+DE G V+Y +V  D +GA  PG+LP+   ++ A+
Sbjct:   38 AVSVGDAAPDFTLMGAGFEQTTLSSLKGQKVVLAFFPAAFSGDEDGGCRCQLGALQSISKE---DGITVLGISKDTPFTMGAWSDDIGIK--CLADMQNEVAEQYVGTFDLGKFLDDLDISKGFTGYVTSNRGCVVIDEEGKVVYTWVGLDDKGASHPGILPNTTEIQAAL 203          
BLAST of jgi.p|Trimin1|34177 vs. uniprot
Match: C1MIC4_MICPC (Thioredoxin-dependent peroxiredoxin n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MIC4_MICPC)

HSP 1 Score: 124 bits (312), Expect = 1.700e-32
Identity = 74/171 (43.27%), Postives = 106/171 (61.99%), Query Frame = 0
Query:    7 ALRVGDRAPCCTLPASDFKNVSVP-VAGRKTVLAFFPAAFSGGPEKGCECQMATLNKELQELTAAGAAVVGISRELPFTMAAWAQKLGLQFPLLSDSNLKVAQQYVGTVDLGAMIDARTRTRGLAGYLSSNRGVVVVDERGMVIYKYVSTDTQGAPDPGVLPDLGPVKEAV 176
            A++VGD AP  TL    F+  ++  + G+K  LAFFPAA+SG  + GCECQ+  L K + E    G  V+GIS++ PFTMA W+ K+G  F  LSD +L  +++YVGT DLG  +D    +   A Y++SNRG VV+DE G V+Y + S       +PG+LPD   ++ A+
Sbjct:   39 AVKVGDAAPDFTLMGPGFELTTLSKLKGQKVCLAFFPAAYSGDADGGCECQLGAL-KSISETD--GVTVLGISKDTPFTMAPWSAKVG--FTCLSDPSLATSEKYVGTFDLGKFLDDIDVSTNFAPYVTSNRGCVVLDETGKVVYVWNSPG-----EPGMLPDTTEIQAAL 199          
BLAST of jgi.p|Trimin1|34177 vs. uniprot
Match: A0A7S0RLU4_9CHLO (Thioredoxin-dependent peroxiredoxin n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RLU4_9CHLO)

HSP 1 Score: 124 bits (311), Expect = 2.810e-32
Identity = 76/171 (44.44%), Postives = 108/171 (63.16%), Query Frame = 0
Query:    7 ALRVGDRAPCCTL--PASDFKNVSVPVAGRKTVLAFFPAAFSGGPEKGCECQMATLNKELQELTAAGAAVVGISRELPFTMAAWAQKLGLQFPLLSDSNLKVAQQYVGTVDLGAMIDARTRTRGLAGYLSSNRGVVVVDERGMVIYKYVSTDTQGAPDPGVLPDLGPVKEA 175
            A++VGD AP  +L  PA DF +VS+P +G K VLAFFPAAFSG  + GCECQ+     +L  + AAG  V+GIS++ PFTMA WA   G     + DS+  ++++YVGT DLGA ++    ++G   Y+  NRG VVV++ G V+Y ++  D  G P P +LP +  +  A
Sbjct:   42 AVKVGDEAPDFSLTGPAGDFASVSLPKSG-KAVLAFFPAAFSGDADGGCECQL----NQLASVKAAGVPVIGISKDSPFTMAKWAAATG-DLTYVCDSDNAISEEYVGTFDLGAFLNNLGISKGFK-YVCPNRGCVVVED-GKVVYTWIGQDETG-PRPDLLPPIDEIMAA 203          
BLAST of jgi.p|Trimin1|34177 vs. uniprot
Match: A0A7S0RMJ4_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RMJ4_9CHLO)

HSP 1 Score: 116 bits (291), Expect = 7.670e-30
Identity = 69/156 (44.23%), Postives = 98/156 (62.82%), Query Frame = 0
Query:   20 PASDFKNVSVPVAGRKTVLAFFPAAFSGGPEKGCECQMATLNKELQELTAAGAAVVGISRELPFTMAAWAQKLGLQFPLLSDSNLKVAQQYVGTVDLGAMIDARTRTRGLAGYLSSNRGVVVVDERGMVIYKYVSTDTQGAPDPGVLPDLGPVKEA 175
            PA DF +VS+P +G K VLAFFPAAFSG  + GCECQ+     +L  + AAG  V+GIS++ PFTMA WA   G     + DS+  ++++YVGT DLGA ++    ++G   Y+  NRG VVV++ G V+Y ++  D  G P P +LP +  +  A
Sbjct:    9 PAGDFASVSLPKSG-KAVLAFFPAAFSGDADGGCECQL----NQLASVKAAGVPVIGISKDSPFTMAKWAAATG-DLTYVCDSDNAISEEYVGTFDLGAFLNNLGISKGFK-YVCPNRGCVVVED-GKVVYTWIGQDETG-PRPDLLPPIDEIMAA 155          
BLAST of jgi.p|Trimin1|34177 vs. uniprot
Match: A0A7S0PQE6_MICPS (Thioredoxin-dependent peroxiredoxin n=2 Tax=Micromonas TaxID=38832 RepID=A0A7S0PQE6_MICPS)

HSP 1 Score: 107 bits (267), Expect = 1.080e-25
Identity = 69/172 (40.12%), Postives = 96/172 (55.81%), Query Frame = 0
Query:    7 ALRVGDRAPCCTLPASDFKNVSVP-VAGRKTVLAFFPAAFSGGPEKGCECQMATLNKELQELTAA-GAAVVGISRELPFTMAAWAQKLGLQFPLLSDSNLKVAQQYVGTVDLGAMIDARTRTRGLAGYLSSNRGVVVVDERGMVIYKYVSTDTQGAPDPGVLPDLGPVKEAV 176
            A++VGD+AP   L    F+   +  + G K VLAFFPAAFSG  + GC+CQ+    + LQ +    G  V+GI ++ PF M AW Q  G+    LSD +LK  + YVGT+D G  +D    +    GY++S RG VV+DE   VIY +      G PD   LPD   ++ A+
Sbjct:   48 AVKVGDKAPDFALMGEGFEVTKLSDLKGSKVVLAFFPAAFSGDADGGCQCQL----QALQSIAKTDGVKVLGICKDQPFAMGAWKQVQGID--CLSDWSLKTCEAYVGTLDFGEFLDGLDVSTDFKGYMASRRGCVVLDEDQKVIYSW-----NGMPDQ--LPDTTEIQAAL 206          
BLAST of jgi.p|Trimin1|34177 vs. uniprot
Match: A0A7J5F8X6_9BACT (Peroxiredoxin n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7J5F8X6_9BACT)

HSP 1 Score: 97.4 bits (241), Expect = 1.790e-22
Identity = 67/168 (39.88%), Postives = 92/168 (54.76%), Query Frame = 0
Query:   10 VGDRAPCCTLPASDFKNVSVP-VAGRKTVLAFFPAAFSGGPEKGCECQMATLNKELQELTAAGAAVVGISRELPFTMAAWAQKLGLQFPLLSDSNLKVAQQYVGTVDLGAMIDARTRTRGLAGYLSSNRGVVVVDERGMVIYKYVSTDTQGAPDPGVLPDLGPVKEAV 176
            VG +AP  TLP +  K  S+   AG+KTVL F+P AF+G     CE ++ T    + +  +  A V+GIS + PF+  A+A+K G+ FPLLSD    V+ QY G V+  A         GL G  ++NR V VVD  G V Y ++S +      PGV P    VK+AV
Sbjct:    5 VGQKAPNFTLPDTGKKQTSLSDFAGKKTVLVFYPGAFTGV----CEKELCTFRDAMADFNSLNAQVIGISVDSPFSNKAFAEKNGVTFPLLSDYTRYVSAQYCGLVNNFA---------GLVGLTAANRAVFVVDAAGTVTYTWISEN------PGVEPPYEEVKKAV 153          
BLAST of jgi.p|Trimin1|34177 vs. uniprot
Match: A0A7S1T4G2_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T4G2_9RHOD)

HSP 1 Score: 97.4 bits (241), Expect = 2.990e-22
Identity = 59/154 (38.31%), Postives = 82/154 (53.25%), Query Frame = 0
Query:   31 VAGRKTVLAFFPAAFSGGPEKGCECQMATLNKELQELTAAGAAV--------VGISRELPFTMAAWAQKLGLQFPLLSDSNLKVAQQYVGTVDLGAMIDARTRTRGLAGYLSSNRGVVVVDERGMVIYKYVSTDTQGAPDPGVLPDLGPVKEAV 176
            + G+  V AFFPAAFSGGPE+GCE Q+  LN     L A G  +         G+S +LPF   A+  KL L FPLLSD  L   ++ VG    G  +     +R L G L++NRG ++V+  G +IY + S        PG+ P L  +++ V
Sbjct:   27 IHGKTAVFAFFPAAFSGGPEEGCEMQLCGLNS----LVAEGGPLHDKSKFITFGVSGDLPFANQAFGNKLHLDFPLLSDPTLAFCERAVGKCHFGEFLKDHKVSRALVGALTTNRGCLIVNPGGEIIYSFSSDG-----HPGLQPSLSEIRDLV 171          
BLAST of jgi.p|Trimin1|34177 vs. uniprot
Match: A0A7S3EI51_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EI51_9RHOD)

HSP 1 Score: 97.1 bits (240), Expect = 3.810e-22
Identity = 63/164 (38.41%), Postives = 88/164 (53.66%), Query Frame = 0
Query:    8 LRVGDRAPCCTLPASDFKNVSVP-VAGRKTVLAFFPAAFSGGPEKGCECQMATLNKELQELTAAGAAVVGISRELPFTMAAWAQKLGLQFPLLSDSNLKVAQQYVGTVDLGAMI-DARTRTRGLAGYLSSNRGVVVVDERGMVIYKYVSTDTQGAPDPGVLPDL 169
            L+VGD AP   L  S  K V +    G+K V+ FFP AFSGGPE+GCE  + +L       T  GA V+G+S +L F   A+  KL L F LLSD N K+   YV   D+G  + D       + G  +  R + ++ E G V+Y ++  +  GA  PG++P L
Sbjct:    5 LKVGDVAPDFELIDSGLKTVKLSDYRGKKVVVTFFPMAFSGGPEEGCERHLCSLK------TIKGAEVLGVSSDLVFANKAFEHKLELPFKLLSDPNGKLTDSYVDFFDIGTFLADVGVAEDVMRGTTTYPRALYIIGEDGKVVYTWIGEEN-GATHPGIMPIL 161          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|34177 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CIU5_9STRA1.020e-124100.00Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A5B8MH28_9CHLO1.140e-4044.32Thioredoxin-dependent peroxiredoxin n=1 Tax=Chloro... [more]
A0A7S0X294_9CHLO2.310e-3944.44Thioredoxin-dependent peroxiredoxin n=1 Tax=Manton... [more]
C1MIC4_MICPC1.700e-3243.27Thioredoxin-dependent peroxiredoxin n=2 Tax=Microm... [more]
A0A7S0RLU4_9CHLO2.810e-3244.44Thioredoxin-dependent peroxiredoxin n=1 Tax=Pyrami... [more]
A0A7S0RMJ4_9CHLO7.670e-3044.23Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A7S0PQE6_MICPS1.080e-2540.12Thioredoxin-dependent peroxiredoxin n=2 Tax=Microm... [more]
A0A7J5F8X6_9BACT1.790e-2239.88Peroxiredoxin n=1 Tax=Bacteroidetes bacterium TaxI... [more]
A0A7S1T4G2_9RHOD2.990e-2238.31Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S3EI51_9RHOD3.810e-2238.41Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 50..70
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 2..176
e-value: 3.0E-29
score: 103.3
NoneNo IPR availablePIRSRPIRSR000239-1PIRSR000239-1coord: 8..157
e-value: 3.9E-11
score: 40.5
NoneNo IPR availablePANTHERPTHR43110THIOL PEROXIDASEcoord: 8..161
IPR000866Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidantPFAMPF00578AhpC-TSAcoord: 10..150
e-value: 2.2E-20
score: 72.8
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 8..177
score: 11.396536
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 7..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_184contigContig_184:221361..226279 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|34177mRNA_17808Tribonema minus UTEX_B_3156 mRNAContig_184 221311..226542 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|34177|CE34176_63 ID=Trimin1|34177|CE34176_63|Name=jgi.p|Trimin1|34177|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=184bp
MASSIGALRVGDRAPCCTLPASDFKNVSVPVAGRKTVLAFFPAAFSGGPE
KGCECQMATLNKELQELTAAGAAVVGISRELPFTMAAWAQKLGLQFPLLS
DSNLKVAQQYVGTVDLGAMIDARTRTRGLAGYLSSNRGVVVVDERGMVIY
KYVSTDTQGAPDPGVLPDLGPVKEAVLGARAKL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000866AhpC/TSA
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf