Trimin1|340019|MIX48782_59_39 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|340019
Unique NameTrimin1|340019|MIX48782_59_39
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length701
Homology
BLAST of jgi.p|Trimin1|340019 vs. uniprot
Match: A0A836C818_9STRA (RNA-dependent RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C818_9STRA)

HSP 1 Score: 1357 bits (3512), Expect = 0.000e+0
Identity = 700/700 (100.00%), Postives = 700/700 (100.00%), Query Frame = 0
Query:    1 MRAGATLSTCSDENYGRVPAQDQFLAYSSGQLREGGAWFYADPQRGDADAHAPTGNAIRRWMGTFDTIKVVAKYAARLGQSFGVIPDKMADGGYCFSDGVGRMSTQLAGDIADKLDWPPDSYLPLALQVRFAGAKGMVTLCHADPESFGAVAXXXXXXXXXXNMPRGVLLQLRKSQIKYEAPHRNMEVLDWAKHMPCYLNRPLVMLLELLGALERVTISESAGHGGNLDDPAAGAPMVVAMDLLEAGFKLSEEPYLRGIMDALRKSMMEELKQRARVLVPQAVVLFGVMDETNSLKDGKHNKRGYEGGPAVLRLGEVLVGRNPSLHPGDVRVLEAVDAPALRHLTNCAVFPAEGQRPHPSQMAGGDLNGDIFFVCWDESLLPPPWQRNQEAMDYTAPTPQKVDVVTTAHLKDFFVDYLVNDILGWVCTTQLITGDAFPEGARCDNCLQLAPLASMAVDFAKTGVPAQMPPELRRNSYPHWFGGRVGSGVHKSKKALGKMYDRVCQVGEAQQADIAQEVMESLPLAFGYQCYRLRWLLLXXXXXXXXXXXXXXXLQGYMEEAEQHLHHYTYELRQIMKQFVVSDEHALMSGRAKPGARAAAGRRNKHHGEAQKQMDLQLARLRAEYRRLFFEGFAQDGRGAGAASGSSSGTAAVSGAELFERLRKASAWYATAAEHKHADVAMSFPFVVHDLLCELRGAPQ 700
            MRAGATLSTCSDENYGRVPAQDQFLAYSSGQLREGGAWFYADPQRGDADAHAPTGNAIRRWMGTFDTIKVVAKYAARLGQSFGVIPDKMADGGYCFSDGVGRMSTQLAGDIADKLDWPPDSYLPLALQVRFAGAKGMVTLCHADPESFGAVAXXXXXXXXXXNMPRGVLLQLRKSQIKYEAPHRNMEVLDWAKHMPCYLNRPLVMLLELLGALERVTISESAGHGGNLDDPAAGAPMVVAMDLLEAGFKLSEEPYLRGIMDALRKSMMEELKQRARVLVPQAVVLFGVMDETNSLKDGKHNKRGYEGGPAVLRLGEVLVGRNPSLHPGDVRVLEAVDAPALRHLTNCAVFPAEGQRPHPSQMAGGDLNGDIFFVCWDESLLPPPWQRNQEAMDYTAPTPQKVDVVTTAHLKDFFVDYLVNDILGWVCTTQLITGDAFPEGARCDNCLQLAPLASMAVDFAKTGVPAQMPPELRRNSYPHWFGGRVGSGVHKSKKALGKMYDRVCQVGEAQQADIAQEVMESLPLAFGYQCYRLRWLLLXXXXXXXXXXXXXXXLQGYMEEAEQHLHHYTYELRQIMKQFVVSDEHALMSGRAKPGARAAAGRRNKHHGEAQKQMDLQLARLRAEYRRLFFEGFAQDGRGAGAASGSSSGTAAVSGAELFERLRKASAWYATAAEHKHADVAMSFPFVVHDLLCELRGAPQ
Sbjct:    1 MRAGATLSTCSDENYGRVPAQDQFLAYSSGQLREGGAWFYADPQRGDADAHAPTGNAIRRWMGTFDTIKVVAKYAARLGQSFGVIPDKMADGGYCFSDGVGRMSTQLAGDIADKLDWPPDSYLPLALQVRFAGAKGMVTLCHADPESFGAVAXXXXXXXXXXNMPRGVLLQLRKSQIKYEAPHRNMEVLDWAKHMPCYLNRPLVMLLELLGALERVTISESAGHGGNLDDPAAGAPMVVAMDLLEAGFKLSEEPYLRGIMDALRKSMMEELKQRARVLVPQAVVLFGVMDETNSLKDGKHNKRGYEGGPAVLRLGEVLVGRNPSLHPGDVRVLEAVDAPALRHLTNCAVFPAEGQRPHPSQMAGGDLNGDIFFVCWDESLLPPPWQRNQEAMDYTAPTPQKVDVVTTAHLKDFFVDYLVNDILGWVCTTQLITGDAFPEGARCDNCLQLAPLASMAVDFAKTGVPAQMPPELRRNSYPHWFGGRVGSGVHKSKKALGKMYDRVCQVGEAQQADIAQEVMESLPLAFGYQCYRLRWLLLXXXXXXXXXXXXXXXLQGYMEEAEQHLHHYTYELRQIMKQFVVSDEHALMSGRAKPGARAAAGRRNKHHGEAQKQMDLQLARLRAEYRRLFFEGFAQDGRGAGAASGSSSGTAAVSGAELFERLRKASAWYATAAEHKHADVAMSFPFVVHDLLCELRGAPQ 700          
BLAST of jgi.p|Trimin1|340019 vs. uniprot
Match: A0A803Q3K7_CANSA (RNA-dependent RNA polymerase n=2 Tax=Cannabis sativa TaxID=3483 RepID=A0A803Q3K7_CANSA)

HSP 1 Score: 333 bits (854), Expect = 2.090e-97
Identity = 206/613 (33.61%), Postives = 314/613 (51.22%), Query Frame = 0
Query:   23 QFLAYSSGQLREGGAWFYADPQRGDADAHAPTGNAIRRWMGTFDTIKVVAKYAARLGQSFG--------------VIPD---KMADGGYCFSDGVGRMSTQLAGDIADKLDWPPDSYLPLALQVRFAGAKGMVTLCHADPESFGAVAXXXXXXXXXXNMPRGVLLQLRKSQIKYEAPHRNMEVLDWAKHMPCYLNRPLVMLLELLGALERV--------------TISESAGHGGNLDDPAAGAPMVVAMDLLEAGFKLSEEPYLRGIMDALRKSMMEELKQRARVLVPQAVVLFGVMDETNSLKDGK-------------HNKRGYEGGPAVLRLGEVLVGRNPSLHPGDVRVLEAVDAPALRHLTNCAVFPAEGQRPHPSQMAGGDLNGDIFFVCWDESLLPPPWQRNQEAMDYT-APTPQKVDVVTTAHLKDFFVDYLVNDILGWVCTTQLITGDAFPEGARCDNCLQLAPLASMAVDFAKTGVPAQMPPELRRNSYPHWFGGRVGSGVHKSKKALGKMYDRVCQVGEAQQADIAQEVMESLPLAFGYQCYRLRWLLLXXXXXXXXXXXXXXXLQGYMEEAEQHLHHYTYELRQIMKQFVVSDEHALMSG 590
            +FL +SS QLR+   W +A  +  +AD        IRRWMG F +I+ VAKYAARLGQSFG              +IPD   K  +  YCFSDG+G++S   A  +A K     + + P A Q+RF G KG+V +   DP+S                    + L LR S  KY++ ++ ++VL W+K+ PC+LNR L+ LL  LG  + V               +++S      L+  A G    +  ++L  G+K  EEP+L  ++  +  S + E++ + R+ +P    L G +DET +L+ G+              N         V+   +V+V +NP LHPGD+RVL+AVD P L H+ +C VFP +G+RPH  + +G DL+GDI+FVCWD  L+PP   +  EAMDYT APT Q    VT   ++++F DY+VND LG +     +  D  P+ A+ + C++LA L S+AVDF KTGVPA++P  LR   YP  F  +     ++S+  +GK++ ++  V     +      ++S       +CY                       + Y+E+A  H + Y Y+L  +M  + +  E  ++SG
Sbjct:  397 EFLGFSSSQLRDNSVWMFASREGLNADD-------IRRWMGDFSSIRNVAKYAARLGQSFGSSRETLSVGCDEIELIPDIEIKTGENKYCFSDGIGKISEDFADQVAKKCGL--NRFTPSAFQIRFGGNKGVVAI---DPKS-------------------SMKLSLRNSMCKYKSENKKLDVLAWSKYQPCFLNRQLITLLSTLGVEDHVFDKKQKEAVRRLDSILTDSIRAQDELEMVAPGEITSILKEMLMCGYKPDEEPFLSMMLQTIHASKLLEIRTKTRIHIPNGRALMGCLDETGTLEYGQVFVQCSTRQVVVFDNXXXXXXXXFVVGK-KVVVAKNPCLHPGDIRVLQAVDVPELHHMVDCVVFPQKGERPHTDECSGSDLDGDIYFVCWDNELIPP---QQFEAMDYTPAPTIQLDHDVTIKEIQEYFTDYIVNDSLGIIANAHTVFADKEPKKAKSNQCIELAKLFSIAVDFPKTGVPAKIPSRLRAKEYPD-FMEKQDKTCYESQHVIGKLFRQIKDVENHSSS------IKSFTKEIARKCY--------------DSDMEVDGFEDYIEDALIHKNQYDYKLGSLMDYYDIKTEAEILSG 953          
BLAST of jgi.p|Trimin1|340019 vs. uniprot
Match: A0A2Z7ALT6_9LAMI (RNA-dependent RNA polymerase n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7ALT6_9LAMI)

HSP 1 Score: 331 bits (848), Expect = 2.420e-96
Identity = 196/528 (37.12%), Postives = 284/528 (53.79%), Query Frame = 0
Query:   24 FLAYSSGQLREGGAWFYADPQRGDADAHAPTGNAIRRWMGTFDTIKVVAKYAARLGQSFGVIPDKMADGG-----------------YCFSDGVGRMSTQLAGDIADKLDWPPDSYLPLALQVRFAGAKGMVTLCHADPESFGAVAXXXXXXXXXXNMPRGVLLQLRKSQIKYEAPHRNMEVLDWAKHMPCYLNRPLVMLLELLGALERVTISESAGHGGNLDD--------------PAAGAPMVVAMDLLEAGFKLSEEPYLRGIMDALRKSMMEELKQRARVLVPQAVVLFGVMDETNSLKDGK----HNKRGY------------EGGPAVLRLGEVLVGRNPSLHPGDVRVLEAVDAPALRHLTNCAVFPAEGQRPHPSQMAGGDLNGDIFFVCWDESLLPPPWQRNQEAMDYT-APTPQKVDVVTTAHLKDFFVDYLVNDILGWVCTTQLITGDAFPEGARCDNCLQLAPLASMAVDFAKTGVPAQMPPELRRNSYPHWFGGRVGSGVHKSKKALGKMYDRV 503
            FLA+SS QLR+   W +A   R  AD        IR+WMG F +I+ VAKYAARLGQSFG   + ++ G                  Y FSDG+G++S+  A  +A K        +P A Q+R+ G KG+V +   DP SF                   V L LR S +KY++ +  ++VL W+K+ PC+LNR ++ LL  LG  + V   +       LDD               + G    +  ++L+ G+K  EEP+L  ++ A R S + +L+ +AR+ VPQA  + G +DET +L+ G+     +  G+            E     +  G+V+V +NP LHPGDVRVL A+D P L H+ +C VFP +G RPHP++ +G DL+GDI+FVCWD  L+PP   +    MDY  AP+ Q    VT   ++++F +Y+VND LG +     +  D  P  A  D CLQLA L S+AVDF KTGVPA++PP+LR   YP  F  +     ++S++ +GK+Y  V
Sbjct:  446 FLAFSSSQLRDNSVWMFASTSRRSADD-------IRQWMGDFRSIRNVAKYAARLGQSFGSSTETLSVGRHEIEKIMDIEAVYNGMKYVFSDGIGKISSDFARKVASKCG--VKGSIPSAFQIRYGGYKGVVAV---DPSSF-------------------VKLSLRPSMLKYQSDNTKLDVLAWSKYQPCFLNRQIITLLSTLGIKDYVFEEKQREAVAQLDDILVDPWRAQEALELMSPGENTNILKEMLKCGYKPDEEPFLSMMLQAFRSSKLLDLRMKARIFVPQARQMMGCLDETGTLEYGQVFVQFSSAGHRQVSVESSLFNEESDEYYIIRGKVVVAKNPCLHPGDVRVLRAIDVPQLHHMVDCVVFPKKGTRPHPNECSGSDLDGDIYFVCWDPDLIPP---KQISPMDYNPAPSTQLDHDVTIEEVQEYFTNYIVNDSLGVIANAHTVFADKEPVMAMSDPCLQLAKLFSIAVDFPKTGVPAEIPPDLRVKEYPD-FMEKPDKTTYESQRVIGKLYRAV 938          
BLAST of jgi.p|Trimin1|340019 vs. uniprot
Match: A0A072VFQ4_MEDTR (RNA-dependent RNA polymerase n=2 Tax=Medicago truncatula TaxID=3880 RepID=A0A072VFQ4_MEDTR)

HSP 1 Score: 331 bits (848), Expect = 2.680e-96
Identity = 233/715 (32.59%), Postives = 352/715 (49.23%), Query Frame = 0
Query:   23 QFLAYSSGQLREGGAWFYADPQRGDADAHAPTGNAIRRWMGTFDTIKVVAKYAARLGQSFG--------------VIPDKMADGGYCFSDGVGRMSTQLAGDIADKLDWPPDSYLPLALQVRFAGAKGMVTLCHADPESFGAVAXXXXXXXXXXNMPRGVLLQLRKSQIKYEAPHRNMEVLDWAKHMPCYLNRPLVMLLELLGALERV--------------TISESAGHGGNLDDPAAGAPMVVAMDLLEAGFKLSEEPYLRGIMDALRKSMMEELKQRARVLVPQAVVLFGVMDETNSLKDGK---HNKRGYEGGPAVLRLGEVLVGRNPSLHPGDVRVLEAVDAPALRHLTNCAVFPAEGQRPHPSQMAGGDLNGDIFFVCWDESLLPPPWQRNQEAMDYTAPTPQKVDV-VTTAHLKDFFVDYLVNDILGWVCTTQLITGDAFPEGARCDNCLQLAPLASMAVDFAKTGVPAQMPPELRRNSYPHWFGGRVGSGVHKSKKALGKMYDRVCQVGEAQQADIAQEVMESLPLAFGYQCYRLRWLLLXXXXXXXXXXXXXXXLQGYMEEAEQHLHHYTYELRQIMKQFVVSDEHALMSGRAKPGARAAAGRRNKHHGEAQKQMDLQLARLRAEYRRLFFEGFAQDGRGAGAASGSSSGTAAVSGAELFERLRKASAWYATAAEHKH---------ADVAMSFPFVVHDLLCELR 696
            +FLA+SS QLRE   W +A    GD      T  +IR WMG F  IK VAKYAARLGQSFG              +I D      Y FSDG+G++S +LA  +A K  +  DS +P A Q+R+ G KG+V +   DP S                    V L LR S +KY++ + +++VL  +K  PCYLNR L+ LL  L   + V               +++S      LD  ++G    +  ++L  G+K + EP+L  ++   R S + EL+Q+ R+ +P+   + GV+DET +L+ G+         E   + +  G+V+V +NP L+PGDVRVL+AVD PALRH+ +C VFP +G RPHP++ +G DL+GDI+FVCWD  L+PP   +  + M+Y +  P  +D  V    ++ +F DY++ND LG +     +  D  P  A  D C++LA L S AVDF KTG+PA++P  L    YP  F  +    ++KSK  +GK++       E Q        + S  L    + Y                         Y+++A  H  +Y Y+L  +M  + +  E  ++SG     +++   +R+    +A   + + +  LR E R  F +       GAG  SGS             +   KASAWY     H +          D  +SFP+ V+ LL +++
Sbjct:  459 EFLAFSSSQLRESSLWMFARTPTGD------TAGSIREWMGDFSRIKNVAKYAARLGQSFGSSTETTTVSSTEIEIILDVHNKTKYVFSDGIGKISLELARRVAQKCGY--DS-MPSAFQIRYGGYKGVVAV---DPTS-------------------SVKLSLRMSMLKYDSDNTDLDVLACSKFRPCYLNRQLITLLSTLDVEDSVFEKKQKEAVDQLNTILTDSTKAHEVLDLMSSGEVTNILKEMLICGYKPNVEPFLSMMLQTFRASKLLELRQKTRIFIPKGRAMMGVLDETRTLEYGEVFVQYSNNREDSLSHVVNGKVVVAKNPCLYPGDVRVLKAVDVPALRHMVDCVVFPQKGHRPHPNECSGSDLDGDIYFVCWDSELIPP---KTIDPMEYDSAKPIVLDHDVEIEEVQKYFTDYILNDCLGIIANAHTVFADKEPGKAMADPCVELAKLFSTAVDFPKTGIPAEIPRGLFPTEYPD-FMEKPDKPIYKSKNVIGKLFR------EIQGISTKDGSITSFTLEVAKESY--------------DSDMEFEGFMDYVDDAFYHKTNYDYKLGNLMDYYGIKTEAEILSGNIMKMSKSFTKKRD---ADA---ITMAVRSLRKEARSWFTDS------GAGVDSGSD------------DAYAKASAWYYVTYHHSYYGLYNEGMQRDHFLSFPWCVYHLLVQIK 1094          
BLAST of jgi.p|Trimin1|340019 vs. uniprot
Match: A0A1Y1Y435_9FUNG (RNA-dependent RNA polymerase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y435_9FUNG)

HSP 1 Score: 324 bits (830), Expect = 5.210e-96
Identity = 194/510 (38.04%), Postives = 279/510 (54.71%), Query Frame = 0
Query:   23 QFLAYSSGQLREGGAWFYADPQRGDADAHAPTGNAIRRWMGTFDTIKVVAKYAARLGQSFG--------------VIPDKMADGGYCFSDGVGRMSTQLAGDIADKLDWPPDSYLPLALQVRFAGAKGMVTLCHADPESFGAVAXXXXXXXXXXNMPRGVLLQLRKSQIKYEAPHRNMEVLDWAKHMPCYLNRPLVMLLELLGALERVTISESAGHGGNLDDPAAGAPMVVAM---------------DLLEAGFKLSEEPYLRGIMDALRKSMMEELKQRARVLVPQAVVLFGVMDETNSLKDGKHNKRGYEG-GPAVLRL--GEVLVGRNPSLHPGDVRVLEAVDAPALRHLTNCAVFPAEGQRPHPSQMAGGDLNGDIFFVCWDESLLPPPWQRNQEAMDYTAPTPQKVDVVTTAHLKDFFVDYLVNDILGWVCTTQLITGDAFPEGARCDNCLQLAPLASMAVDFAKTGVPAQMPPELRRNSYPHWFGGRVGSGVHKSKKALGKMY 500
            +FLA+SS QLRE G WF+A  +         T ++IR WMG F +IK +AKYA+R+GQ F               +IPD + +G Y FSDGVG++S  LA +I+  LD  P   +P A Q R  G+KG++ L                         RG  + +R SQ+K+E+ H  +E++  A ++PCYLNR ++ LL  LG  + V +         L   +    M + +               +L+ AG ++ ++PYL  ++   + S+++++KQRAR+ VP+  +L GV+D+T SL++ +   +  +   P   R+  G  +V RNP  HPGDVRV+EAV+  AL HL NC  F A G R  P+Q +GGDL+GD + V WD+ L+PP   RN   M+Y  P P KVD V   H+K FFV+Y+ +D LG +    L+  D  P+GA    CL+LA L S+AVDF KTGVPA+  P LR   YP +     G   +KS K  GKMY
Sbjct:  116 EFLAFSSSQLREHGCWFFASTEN-------VTAHSIRHWMGDFRSIKNIAKYASRMGQCFSSTRAIATQPVKDIQMIPDIIRNG-YTFSDGVGKISPSLAKNISRILDLEP---VPSAFQFRLGGSKGVLALSP---------------------YMRGDQVHIRPSQVKFESDHNILEIVKVATYIPCYLNRQIITLLSTLGVPDTVFLDLQQQMIKQLSTMSTSDAMAIKVLTQNADEYGITRRMVELIRAGHRMRQDPYLVNLLKLFQISLLKDVKQRARIHVPKGCLLMGVLDDTLSLRENQIFLQYTDPENPTERRVVEGPCIVTRNPCFHPGDVRVVEAVNVKALAHLYNCVAFSALGFRDVPNQCSGGDLDGDFYTVIWDQELIPP--TRNYPPMEYDPPVPVKVDEVNMDHVKKFFVNYIASDNLGLIANAHLVHSDRHPDGAFNGICLRLAQLNSLAVDFPKTGVPAEFEPGLRAKEYPDFMEKPEGILTYKSTKVQGKMY 591          
BLAST of jgi.p|Trimin1|340019 vs. uniprot
Match: A0A7J6HPI5_CANSA (Uncharacterized protein n=2 Tax=Cannabis sativa TaxID=3483 RepID=A0A7J6HPI5_CANSA)

HSP 1 Score: 335 bits (860), Expect = 9.160e-96
Identity = 206/612 (33.66%), Postives = 313/612 (51.14%), Query Frame = 0
Query:   23 QFLAYSSGQLREGGAWFYADPQRGDADAHAPTGNAIRRWMGTFDTIKVVAKYAARLGQSFG--------------VIPD---KMADGGYCFSDGVGRMSTQLAGDIADKLDWPPDSYLPLALQVRFAGAKGMVTLCHADPESFGAVAXXXXXXXXXXNMPRGVLLQLRKSQIKYEAPHRNMEVLDWAKHMPCYLNRPLVMLLELLGALERV--------------TISESAGHGGNLDDPAAGAPMVVAMDLLEAGFKLSEEPYLRGIMDALRKSMMEELKQRARVLVPQAVVLFGVMDETNSLKDGKHNKRGYEGGPAVLRLG------------EVLVGRNPSLHPGDVRVLEAVDAPALRHLTNCAVFPAEGQRPHPSQMAGGDLNGDIFFVCWDESLLPPPWQRNQEAMDYT-APTPQKVDVVTTAHLKDFFVDYLVNDILGWVCTTQLITGDAFPEGARCDNCLQLAPLASMAVDFAKTGVPAQMPPELRRNSYPHWFGGRVGSGVHKSKKALGKMYDRVCQVGEAQQADIAQEVMESLPLAFGYQCYRLRWLLLXXXXXXXXXXXXXXXLQGYMEEAEQHLHHYTYELRQIMKQFVVSDEHALMSG 590
            +FL +SS QLR+   W +A  +  DAD        IRRWMG F +I+ VAKYAARLGQSFG              +IPD   K  +  YCFSDG+G++S   A  +A K     + + P A Q+RF G KG+V +   DP+S                    + L LR S  KY++ ++ ++VL W+K+ PC+LNR L+ LL  LG  + V               +++S      L+  A G    +  ++L  G+K  EEP+L  ++  +  S + E++ + R+ +P    L G +DET +L+ G+   +       V                +V+V +NP LHPGD+RVL+AVD P L H+ +C VFP +G+RPH  + +G DL+GDI+FVCWD  L+PP   +  EAMDYT APT Q    VT   ++++F DY+VND LG +     +  D  P+ A+ + C++LA L S+AVDF KTGVPA++P  LR   YP  F  +     ++S+  +GK++ ++  V     +      ++S       +CY                       + Y+E+A  H + Y Y+L  +M  + +  E  ++SG
Sbjct:  844 EFLGFSSSQLRDNSVWMFASREGLDADD-------IRRWMGDFSSIRNVAKYAARLGQSFGSSRETLSVGCDEIELIPDIEIKTGENKYCFSDGIGKISEDFADQVAKKCGL--NRFTPSAFQIRFGGNKGVVAI---DPKS-------------------SMKLSLRNSMCKYKSENKKLDVLAWSKYQPCFLNRQLITLLSTLGVEDHVFDKKQKEAVRRLDSILTDSIRAQDELEMVAPGEITSILKEMLMCGYKPDEEPFLSMMLQTIHASKLLEIRTKTRIHIPNGRALMGCLDETGTLEYGQVFVQCSTRQVVVFXXXXXXXXXXXXXGKKVVVAKNPCLHPGDIRVLQAVDVPELHHMVDCVVFPQKGERPHTDECSGSDLDGDIYFVCWDNELIPP---QQFEAMDYTPAPTIQLDHDVTIKEIQEYFTDYIVNDSLGIIANAHTVFADKEPKKAKSNQCIELAKLFSIAVDFPKTGVPAKIPSRLRAKEYPD-FMEKQDKTCYESQHVIGKLFRQIKDVENHSSS------IKSFTKEIARKCY--------------DSDMEVDGFEDYIEDALNHKNQYDYKLGSLMDYYDIKTEAEILSG 1400          
BLAST of jgi.p|Trimin1|340019 vs. uniprot
Match: UPI00125E1688 (probable RNA-dependent RNA polymerase 1 n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125E1688)

HSP 1 Score: 329 bits (844), Expect = 1.090e-95
Identity = 241/733 (32.88%), Postives = 360/733 (49.11%), Query Frame = 0
Query:   23 QFLAYSSGQLREGGAWFYADPQRGDADAHAPTGNAIRRWMGTFDTIKVVAKYAARLGQSFG--------------VIPD---KMADGG-YCFSDGVGRMSTQLAGDIADK--LDWPPDSYLPLALQVRFAGAKGMVTLCHADPESFGAVAXXXXXXXXXXNMPRGVLLQLRKSQIKYEAPHRNMEVLDWAKHMPCYLNRPLVMLLELLGALERVTISESAGHGGNLDDPAA--------------GAPMVVAMDLLEAGFKLSEEPYLRGIMDALRKSMMEELKQRARVLVPQAVVLFGVMDETNSLKDGKHNKRGYEGG-------PAVLR-------LGEVLVGRNPSLHPGDVRVLEAVDAPALRHLTNCAVFPAEGQRPHPSQMAGGDLNGDIFFVCWDESLLPPPWQRNQEAMDYT-APTPQKVDVVTTAHLKDFFVDYLVNDILGWVCTTQLITGDAFPEGARCDNCLQLAPLASMAVDFAKTGVPAQMPPELRRNSYPHWFGGRVGSGVHKSKKALGKMYDRVCQVGEAQQADIAQEVMESLPLAFGYQCYRLRWLLLXXXXXXXXXXXXXXXLQGYMEEAEQHLHHYTYELRQIMKQFVVSDEHALMSGRAK-PGARAAAGRRNKHHGEAQKQMDLQLARLRAEYRRLFFEGFAQDGRGAGAASGSSSGTAAVSGAELFERLRKASAWYATAAEH---------KHADVAMSFPFVVHDLLCELR 696
            +FLA+SS QLRE   W +A            T   IR WMG F  IK VAKYAARLGQSFG              +IPD   +  DG  Y FSDG+G++S + A  +A+K  L  PP +Y     Q+R+ G KG+V +   DP S                      L LRKS +KYE+ +  ++VL W+K+ PCYLNR ++ LL  LG  + V   +       LDD                 G    V +++L  G+K + EP+L  ++  +R + ++EL+ + R+ +P    + G +DET +L  G+   + Y G          V R       LG V+V +NP  HPGDVRVL+AVD   L H+ +C VFP +G RPHP++ +G DL+GDI+FVCWD  L+P   +R    MDYT AP  Q    VT   ++ +F DY++ND LG +    ++  D  P+ A  + CL+LA + S+AVDF KTGVPA++P  LR   YP +   + G   ++SK+ +GK++ +V  +            +    L+   + Y                       + Y++EA  +   +  +L  +M  + +  E  L++GR   P AR    RR+   GEA   + L +  LR E R  F++   + G G G +S            EL ++ R ASAWY     H         ++ +  +SFP+ V+D+L +++
Sbjct:  447 EFLAFSSSQLRENSCWMFASRS-------GLTAADIRAWMGEFQNIKNVAKYAARLGQSFGSSRETSSVESYDLELIPDVELQKDDGTKYTFSDGIGKISAEFAKKVAEKCGLKKPPSAY-----QIRYGGYKGVVAV---DPTSTRK-------------------LSLRKSMLKYESGNTKLDVLSWSKYQPCYLNRQIITLLSTLGISDEVFERKQREVVSQLDDMLTDPNKAQEFLELMPPGEHANVLIEMLRCGYKPNVEPFLSSMLQTVRGTKLQELRTKTRIFIPDGRSMMGCLDETGTLDYGEVFIQ-YSGAGRRHPHLTGVSRYNSDGIILGPVVVAKNPCYHPGDVRVLKAVDVRGLHHMVDCIVFPQKGNRPHPNECSGSDLDGDIYFVCWDPDLIP---KRIVSPMDYTPAPVIQLDHDVTIQEIQKYFADYILNDNLGVISIAHVVFADKEPDMALSEPCLELARIFSVAVDFPKTGVPAEIPSHLRVKEYPDFLD-KPGKPFYESKRVIGKLFRQVKDISAN------WSFISPFTLSVAKKSY--------------DRAMEVDGFKDYIQEAFDYKTRFDEKLVSLMDYYGIKTEAELLTGRVNDPAARLYDRRRD---GEA---VILAVKSLRKEARSWFYDHHPRGGAGRGESS------------ELRKKQR-ASAWYHVTYHHSFWGKYGEGRNHEHFISFPWCVYDVLIKIK 1101          
BLAST of jgi.p|Trimin1|340019 vs. uniprot
Match: A0A249Y701_9CARY (RNA-dependent RNA polymerase n=2 Tax=Cactaceae TaxID=3593 RepID=A0A249Y701_9CARY)

HSP 1 Score: 329 bits (843), Expect = 1.590e-95
Identity = 243/734 (33.11%), Postives = 347/734 (47.28%), Query Frame = 0
Query:   23 QFLAYSSGQLREGGAWFYAD-PQRGDADAHAPTGNAIRRWMGTFDTIKVVAKYAARLGQSFGV--------------IPDKMADGG---YCFSDGVGRMSTQLAGDIADKLDWPPDSYLPLALQVRFAGAKGMVTLCHADPESFGAVAXXXXXXXXXXNMPRGVLLQLRKSQIKYEAPHRNMEVLDWAKHMPCYLNRPLVMLLELLGALERVTISESAGHGGNLD----DPAAGAPMVVAM----------DLLEAGFKLSEEPYLRGIMDALRKSMMEELKQRARVLVPQAVVLFGVMDETNSLKDGK-----HNKRGYEGGPAVLRL-------------GEVLVGRNPSLHPGDVRVLEAVDAPALRHLTNCAVFPAEGQRPHPSQMAGGDLNGDIFFVCWDESLLPPPWQRNQEAMDYTAP-TPQKVDVVTTAHLKDFFVDYLVNDILGWVCTTQLITGDAFPEGARCDNCLQLAPLASMAVDFAKTGVPAQMPPELRRNSYPHWFGGRVGSGVHKSKKALGKMYDRVCQVGEAQQADIAQEVMESLPLAFGYQCYRLRWLLLXXXXXXXXXXXXXXXLQGYMEEAEQHLHHYTYELRQIMKQFVVSDEHALMSGRAKPGARAAAGRRNKHHGEAQKQMDLQLARLRAEYRRLFFEGFAQDGRGAGAASGSSSGTAAVSGAELFERLRKASAWYATAAEHKH---------ADVAMSFPFVVHDLLCELR 696
            +FLA+SS QLR+  AW +A  P    AD        IR WMG F  I+ VAKYAARLGQSFG               IPD     G   Y FSDG+G++S   A  +A K      S  P A Q+R+ G KG+V +   DP S                    + L LRKS  KYE+ +  ++VL ++K+ PCYLNR L+ LL  LG  +RV   +       LD    DP      +  M          ++L+ G+K   EP+L  ++   R S ++EL+ R+R+ VPQ   + G +DET +L  G+        R    G  +L               G+V+V +NP LHPGDVRVL AVD PALRH+ +C VFP +G+RPHP++ +G DL+GDI+F+CWD  ++PP   R  + MDYT P T  K DVVT   + ++F DY++ND LG +        D  P  A   +C++LA L S+AVDF KTGVPA++P  L    YP  F  +     ++S   +GK++               +EV E  P     Q   +R                    + Y+++A  +   Y Y+L  +M  + +  E  ++SG     A++   R++    EA   + + +  LR E R  F E             G SS        +  + L KASAWY       +          D  +SFP+ V+D L  ++
Sbjct:  453 EFLAFSSSQLRDNSAWMFASRPGMSAAD--------IRTWMGDFKKIRNVAKYAARLGQSFGSSTETLTVSRHEIEEIPDVEIGTGKNKYVFSDGIGKISADFAHRVAIKCGLK--SSTPSAFQIRYGGYKGVVAV---DPRSH-------------------MKLSLRKSMCKYESDNDKLDVLAYSKYQPCYLNRQLITLLSTLGVPDRVFEKKQREALNQLDAILTDPLKAQEALELMCPGEFTNILREMLKCGYKPDAEPFLAMMLQTFRSSKLQELRTRSRIFVPQGRAMMGCLDETRTLHYGQVFVQVSGARFRSVGNELLTYVDSEIEPRNFVVTGKVVVAKNPCLHPGDVRVLMAVDVPALRHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFICWDSEMIPP---RQVDPMDYTPPETKTKDDVVTMEDVMEYFADYIINDSLGIIANAHTAFADKEPGKAMSSHCIELAKLFSVAVDFPKTGVPAEIPQHLHVKDYPD-FMEKPDKPTYESVNVIGKLF---------------REVKERSP-----QATAIRTFTREIARKSYDCDMEYDGFEDYLDDAHYYKSQYDYKLGNLMDYYGIKTEAEILSGNIMRMAKSFDKRKD---AEA---ITMAIRSLRKEARAWFSE-----------KQGDSS-------MDANKMLAKASAWYHVTYHPSYWGMYNEGFDRDHFLSFPWCVYDRLITIK 1106          
BLAST of jgi.p|Trimin1|340019 vs. uniprot
Match: A0A5N5LQF4_9ROSI (RNA-dependent RNA polymerase n=4 Tax=Salix TaxID=40685 RepID=A0A5N5LQF4_9ROSI)

HSP 1 Score: 328 bits (841), Expect = 1.860e-95
Identity = 194/526 (36.88%), Postives = 287/526 (54.56%), Query Frame = 0
Query:   23 QFLAYSSGQLREGGAWFYAD-PQRGDADAHAPTGNAIRRWMGTFDTIKVVAKYAARLGQSFG--------------VIPD-KMADGG--YCFSDGVGRMSTQLAGDIADKLDWPPDSYLPLALQVRFAGAKGMVTLCHADPESFGAVAXXXXXXXXXXNMPRGVLLQLRKSQIKYEAPHRNMEVLDWAKHMPCYLNRPLVMLLELLGALERV--------------TISESAGHGGNLDDPAAGAPMVVAMDLLEAGFKLSEEPYLRGIMDALRKSMMEELKQRARVLVPQAVVLFGVMDETNSLKDGK---------------HNKRGYEGGPAVLRLGEVLVGRNPSLHPGDVRVLEAVDAPALRHLTNCAVFPAEGQRPHPSQMAGGDLNGDIFFVCWDESLLPPPWQRNQEAMDYTAPTPQKVDV-VTTAHLKDFFVDYLVNDILGWVCTTQLITGDAFPEGARCDNCLQLAPLASMAVDFAKTGVPAQMPPELRRNSYPHWFGGRVGSGVHKSKKALGKMY 500
            +FL +S+ QLR+   W +A  P    AD        IR+WMG F  IK VAKYAARLGQSF               +IPD K+  GG  Y FSDG+G++S +LA  IA K  +   S+ P A QVR+ G KG+V +   DP S                    + L LR+S  K+++ + ++++L W+K+  CYLNR ++ LL  LG  ++V               +++ A     L+  A G   +   ++L  G+K   EP+L  ++  L  S + +L+ RAR+ +P+   + G +DET +L+ G+               H + G       +  G+++V +NP LHPGD+RVL+AVD PAL H+ +C VFP +G+RPH ++ +G DL+GD++FVCWD  L+PP   R    MDYTA     +D  VT   +++FF DYL+ND LG +C+   +  D  P  AR   C +LA L+S+AVDF KTGVPA++P ELR   YP +         +KS++ LGK++
Sbjct:  422 EFLGFSASQLRDSSLWMFASRPGLSAAD--------IRKWMGDFREIKNVAKYAARLGQSFSSSRESFSVHKNEIEIIPDIKVTSGGVDYVFSDGIGKISAELAHSIAQKFGFR--SFTPSAFQVRYGGYKGVVAV---DPTS-------------------SIKLSLRRSMSKFKSTNTSLDILGWSKYQACYLNREVITLLSTLGVGDQVFQTKQNEAISQLIAILTDPASAQEALELMAPGENTIYLKEMLACGYKPGAEPFLAMMLQTLCASKLLDLRTRARIFIPKGRAMMGCLDETRTLEYGQAFVQYSRARHGQFSDHFRGGESNNNTQILKGKLVVAKNPCLHPGDMRVLQAVDVPALHHMVDCIVFPQKGKRPHTNECSGSDLDGDVYFVCWDRDLIPP---RTFPPMDYTAAQTTILDHDVTIEEVQEFFTDYLLNDSLGIICSAHTVFADREPLMARSRECTELARLSSIAVDFPKTGVPAKIPQELRVKEYPDFMEKPADKRTYKSQRVLGKLF 912          
BLAST of jgi.p|Trimin1|340019 vs. uniprot
Match: A0A2K3PMX5_TRIPR (RNA-dependent RNA polymerase n=3 Tax=Trifolium TaxID=3898 RepID=A0A2K3PMX5_TRIPR)

HSP 1 Score: 328 bits (842), Expect = 2.000e-95
Identity = 236/719 (32.82%), Postives = 356/719 (49.51%), Query Frame = 0
Query:   23 QFLAYSSGQLREGGAWFYADPQRGDADAHAPTGNAIRRWMGTFDTIKVVAKYAARLGQSFG--------------VIPDKMADGG---YCFSDGVGRMSTQLAGDIADKLDWPPDSYLPLALQVRFAGAKGMVTLCHADPESFGAVAXXXXXXXXXXNMPRGVLLQLRKSQIKYEAPHRNMEVLDWAKHMPCYLNRPLVMLLELL----GALER----------VTISESAGHGGNLDDPAAGAPMVVAMDLLEAGFKLSEEPYLRGIMDALRKSMMEELKQRARVLVPQAVVLFGVMDETNSLKDG----KHNKRGYEGGPAVLRLGEVLVGRNPSLHPGDVRVLEAVDAPALRHLTNCAVFPAEGQRPHPSQMAGGDLNGDIFFVCWDESLLPPPWQRNQEAMDYTAPTPQKVDV-VTTAHLKDFFVDYLVNDILGWVCTTQLITGDAFPEGARCDNCLQLAPLASMAVDFAKTGVPAQMPPELRRNSYPHWFGGRVGSGVHKSKKALGKMYDRVCQVGEAQQADIAQEVMESLPLAFGYQCYRLRWLLLXXXXXXXXXXXXXXXLQGYMEEAEQHLHHYTYELRQIMKQFVVSDEHALMSGRAKPGARAAAGRRNKHHGEAQKQMDLQLARLRAEYRRLFFEGFAQDGRGAGAASGSSSGTAAVSGAELFERLRKASAWYATAAEHK---------HADVAMSFPFVVHDLLCELR 696
            +FLA+SS QLRE   W +A    G       T + IR WMG F  I+ VAKYAARLGQSFG              +IPD     G   Y FSDG+G++S +LA  +A K  +  DS +P A Q+R+ G KG+V +   DP S                    V L LRKS  KYE+ +  ++VL  +K  PCYLNR L+ LL  L    G  E+            +++S      LD  ++G    +  ++L  G+K + EP+L  ++   R S + EL+Q+ R+ +P+   + GV+DET +L+ G    K++   + G  + + +G+V+V +NP L+PGDVRVL AVD PALRH+ +C VFP +G+RPHP++ +G DL+GDI+FVCWD  L+PP   R  + M+Y    P  +D  V    ++++F +Y++ND LG +     +  D  P  A  + C++LA L S AVDF KTG+PA +P EL    YP  F  +     +KS   +G ++       E Q+       + S         Y L                       Y+++A  H  +Y Y+L  +M  + +  E  ++SG     +++   RR+    +A   + + +  LR E R  F EG                GT+  SG++  +   KASAWY     H          + D  +SFP+ V+ LL +++
Sbjct:  460 EFLAFSSSQLRENSLWMFARTTTG------VTADFIRAWMGDFSRIRNVAKYAARLGQSFGSSTETLSVSRDEIEIIPDAKVKHGATEYVFSDGIGKISLELARKVAKKCGY--DS-IPSAFQIRYGGYKGVVAV---DPTS-------------------SVKLSLRKSMHKYESDNIKLDVLACSKVQPCYLNRQLITLLSTLDVKDGVFEKKQKEAVDQLNTILTDSTKAQEVLDLMSSGEVTNILKEMLICGYKPNVEPFLSMMLQTFRASKLLELRQKTRIFIPRGRAMMGVLDETRTLEYGEVFVKYSNNRF-GNRSHVVIGKVVVAKNPCLYPGDVRVLNAVDVPALRHMVDCVVFPQKGRRPHPNECSGSDLDGDIYFVCWDSELVPP---RTIDPMEYDTAQPIVLDHDVEIEEVEEYFTNYILNDSLGIIANAHTVHADKEPLKAMAEPCIKLAKLFSTAVDFPKTGIPAVIPRELFAKEYPD-FMEKSDKTTYKSNNVIGTLFR------EIQEISTRDGSITSFTREVAKNSYDL--------------DMEMDGFMDYVDDAFYHKSNYDYKLGNLMDYYGIKTESEILSGNIMKMSKSFTKRRD---ADA---ITMAVRSLRKEARSWFNEG----------------GTSVDSGSD--DAYAKASAWYYVTYHHSFYGLYNEGMNRDHFLSFPWCVYHLLVQIK 1098          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|340019 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C818_9STRA0.000e+0100.00RNA-dependent RNA polymerase n=1 Tax=Tribonema min... [more]
A0A803Q3K7_CANSA2.090e-9733.61RNA-dependent RNA polymerase n=2 Tax=Cannabis sati... [more]
A0A2Z7ALT6_9LAMI2.420e-9637.12RNA-dependent RNA polymerase n=1 Tax=Dorcoceras hy... [more]
A0A072VFQ4_MEDTR2.680e-9632.59RNA-dependent RNA polymerase n=2 Tax=Medicago trun... [more]
A0A1Y1Y435_9FUNG5.210e-9638.04RNA-dependent RNA polymerase n=1 Tax=Basidiobolus ... [more]
A0A7J6HPI5_CANSA9.160e-9633.66Uncharacterized protein n=2 Tax=Cannabis sativa Ta... [more]
UPI00125E16881.090e-9532.88probable RNA-dependent RNA polymerase 1 n=2 Tax=Ip... [more]
A0A249Y701_9CARY1.590e-9533.11RNA-dependent RNA polymerase n=2 Tax=Cactaceae Tax... [more]
A0A5N5LQF4_9ROSI1.860e-9536.88RNA-dependent RNA polymerase n=4 Tax=Salix TaxID=4... [more]
A0A2K3PMX5_TRIPR2.000e-9532.82RNA-dependent RNA polymerase n=3 Tax=Trifolium Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 558..578
NoneNo IPR availablePANTHERPTHR23079:SF1RNA-DEPENDENT RNA POLYMERASE FAMILYcoord: 21..695
IPR007855RNA-dependent RNA polymerase, eukaryotic-typePFAMPF05183RdRPcoord: 23..503
e-value: 1.3E-117
score: 393.9
IPR007855RNA-dependent RNA polymerase, eukaryotic-typePANTHERPTHR23079RNA-DEPENDENT RNA POLYMERASEcoord: 21..695

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_99contigContig_99:496974..513776 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|340019mRNA_12283Tribonema minus UTEX_B_3156 mRNAContig_99 496974..514380 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|340019|MIX48782_59_39 ID=Trimin1|340019|MIX48782_59_39|Name=jgi.p|Trimin1|340019|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=701bp
MRAGATLSTCSDENYGRVPAQDQFLAYSSGQLREGGAWFYADPQRGDADA
HAPTGNAIRRWMGTFDTIKVVAKYAARLGQSFGVIPDKMADGGYCFSDGV
GRMSTQLAGDIADKLDWPPDSYLPLALQVRFAGAKGMVTLCHADPESFGA
VAGAKGMLTLCHNMPRGVLLQLRKSQIKYEAPHRNMEVLDWAKHMPCYLN
RPLVMLLELLGALERVTISESAGHGGNLDDPAAGAPMVVAMDLLEAGFKL
SEEPYLRGIMDALRKSMMEELKQRARVLVPQAVVLFGVMDETNSLKDGKH
NKRGYEGGPAVLRLGEVLVGRNPSLHPGDVRVLEAVDAPALRHLTNCAVF
PAEGQRPHPSQMAGGDLNGDIFFVCWDESLLPPPWQRNQEAMDYTAPTPQ
KVDVVTTAHLKDFFVDYLVNDILGWVCTTQLITGDAFPEGARCDNCLQLA
PLASMAVDFAKTGVPAQMPPELRRNSYPHWFGGRVGSGVHKSKKALGKMY
DRVCQVGEAQQADIAQEVMESLPLAFGYQCYRLRWLLLLLLLLLLLLLPL
LLLLQGYMEEAEQHLHHYTYELRQIMKQFVVSDEHALMSGRAKPGARAAA
GRRNKHHGEAQKQMDLQLARLRAEYRRLFFEGFAQDGRGAGAASGSSSGT
AAVSGAELFERLRKASAWYATAAEHKHADVAMSFPFVVHDLLCELRGAPQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007855RNA-dep_RNA_pol_euk-typ