Trimin1|339873|MIX48636_66_33 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|339873
Unique NameTrimin1|339873|MIX48636_66_33
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length501
Homology
BLAST of jgi.p|Trimin1|339873 vs. uniprot
Match: A0A835YGA3_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGA3_9STRA)

HSP 1 Score: 702 bits (1811), Expect = 2.060e-250
Identity = 500/500 (100.00%), Postives = 500/500 (100.00%), Query Frame = 0
Query:    1 MEPGDEESEVQNDLKRYPRFGKRGAPQAFATKLFELLSNESPDIVSWTPSGLAFRIHDMEKFTSECLIKYFKHNNAASFQRQLNLYGFRKSLKGEDSGGFQHASFQRDRPELLIEVRRTVQASQAAKRKTETVDDGVPEYVPASRSRMGSAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAVSAELYTSPAQLQVMAGGAVQQAAPEGYMPMAYPAMGLMEYSMLGIPQMGAFGGLLLPPGAMTSLAMQYXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPAQLQHMMVPQYAPYLYGQAFGQTPYGATAAVDAQMQMXXXMMGYAQAYAPPAMGGGYAQGAVAEGXXXXXXXXXMTAEQQQXXXXXXAMQAVQQQQAIMQAQVAHNGGGSGDSSDATSRSGSDGAAQRPQSQLTAAMSVADMXXXXXXXXXXXXXXXLPPQAGLREAGSGGVQALSLFGQEGRGRAAGGARASAAAAT 500
            MEPGDEESEVQNDLKRYPRFGKRGAPQAFATKLFELLSNESPDIVSWTPSGLAFRIHDMEKFTSECLIKYFKHNNAASFQRQLNLYGFRKSLKGEDSGGFQHASFQRDRPELLIEVRRTVQASQAAKRKTETVDDGVPEYVPASRSRMGSAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAVSAELYTSPAQLQVMAGGAVQQAAPEGYMPMAYPAMGLMEYSMLGIPQMGAFGGLLLPPGAMTSLAMQYXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPAQLQHMMVPQYAPYLYGQAFGQTPYGATAAVDAQMQMXXXMMGYAQAYAPPAMGGGYAQGAVAEGXXXXXXXXXMTAEQQQXXXXXXAMQAVQQQQAIMQAQVAHNGGGSGDSSDATSRSGSDGAAQRPQSQLTAAMSVADMXXXXXXXXXXXXXXXLPPQAGLREAGSGGVQALSLFGQEGRGRAAGGARASAAAAT
Sbjct:    1 MEPGDEESEVQNDLKRYPRFGKRGAPQAFATKLFELLSNESPDIVSWTPSGLAFRIHDMEKFTSECLIKYFKHNNAASFQRQLNLYGFRKSLKGEDSGGFQHASFQRDRPELLIEVRRTVQASQAAKRKTETVDDGVPEYVPASRSRMGSAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAVSAELYTSPAQLQVMAGGAVQQAAPEGYMPMAYPAMGLMEYSMLGIPQMGAFGGLLLPPGAMTSLAMQYXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPAQLQHMMVPQYAPYLYGQAFGQTPYGATAAVDAQMQMXXXMMGYAQAYAPPAMGGGYAQGAVAEGXXXXXXXXXMTAEQQQXXXXXXAMQAVQQQQAIMQAQVAHNGGGSGDSSDATSRSGSDGAAQRPQSQLTAAMSVADMXXXXXXXXXXXXXXXLPPQAGLREAGSGGVQALSLFGQEGRGRAAGGARASAAAAT 500          
BLAST of jgi.p|Trimin1|339873 vs. uniprot
Match: A0A7S2BSE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSE7_9STRA)

HSP 1 Score: 129 bits (324), Expect = 4.800e-32
Identity = 62/110 (56.36%), Postives = 78/110 (70.91%), Query Frame = 0
Query:   16 RYPRFGKRGAPQAFATKLFELLSNESPDIVSWTPSGLAFRIHDMEKFTSECLIKYFKHNNAASFQRQLNLYGFRKSLKGEDSGGFQHASFQRDRPELLIEVRRTVQASQA 125
            +YPR G+RGAPQ F  KL+E+LS E  DI+ WT SG +F I +ME F +  L+KYF+H   +SFQRQLNLYGFRK  KG D G + H  F RD+PELL +VRR  Q++ A
Sbjct:    2 KYPRTGRRGAPQVFPRKLYEILSTEREDIIGWTDSGKSFIIKEMETFVTNILMKYFRHQKYSSFQRQLNLYGFRKVQKGTDVGSYAHECFIRDQPELLTKVRRIPQSAGA 111          
BLAST of jgi.p|Trimin1|339873 vs. uniprot
Match: A0A7S2WKC6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKC6_9STRA)

HSP 1 Score: 133 bits (335), Expect = 2.900e-31
Identity = 65/115 (56.52%), Postives = 84/115 (73.04%), Query Frame = 0
Query:   10 VQNDLKRYPRFGKRGAPQAFATKLFELLSNESPDIVSWTPSGLAFRIHDMEKFTSECLIKYFKHNNAASFQRQLNLYGFRKSLKGEDSGGFQHASFQRDRPELLIEVRRTVQASQ 124
            V  D ++YPR GKRGAPQAFA KL+E+L  ES ++++W+ +G AF I DM+ F S+ L+KYF+H   +SFQRQLNLYGFRK+ KG+D GG+ H  F R R +LL  VRRT Q  Q
Sbjct:   66 VPGDQRKYPRTGKRGAPQAFAHKLYEILEAESTEVIAWSGTGRAFFIKDMDIFVSQVLLKYFRHVKYSSFQRQLNLYGFRKATKGQDVGGYYHHYFMRSRRDLLPFVRRTPQQPQ 180          
BLAST of jgi.p|Trimin1|339873 vs. uniprot
Match: A0A7S2WU52_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WU52_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.050e-30
Identity = 66/114 (57.89%), Postives = 81/114 (71.05%), Query Frame = 0
Query:   10 VQNDLKRYPRFGKRGAPQAFATKLFELLSNESPDIVSWTPSGLAFRIHDMEKFTSECLIKYFKHNNAASFQRQLNLYGFRKSLKGEDSGGFQHASFQRDRPELLIEVRRTVQAS 123
            V    +RYPR GKRGAPQ FA KL+E+L NE PD +SWT SG +F I +M+ F +  L+KYF+H   +SFQRQLNLYGFRK  KG D+G + H SF R +PELL  VRR  Q+S
Sbjct:  150 VSGQTQRYPRTGKRGAPQVFARKLYEILDNEPPDAISWTTSGTSFVIKEMDAFVTCVLMKYFRHQKYSSFQRQLNLYGFRKISKGSDAGAYAHESFIRGQPELLHFVRRMPQSS 263          
BLAST of jgi.p|Trimin1|339873 vs. uniprot
Match: A0A7S2R5C8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5C8_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.510e-30
Identity = 67/120 (55.83%), Postives = 83/120 (69.17%), Query Frame = 0
Query:   12 NDLKRYPRFGKRGAPQAFATKLFELLSNESPDIVSWTPSGLAFRIHDMEKFTSECLIKYFKHNNAASFQRQLNLYGFRKSLKGEDSGGFQHASFQRDRPELLIEVRRTVQASQAAKRKTE 131
            +D  RYPR GKRGAPQ F  KL+E+L NES D +SWT SG +F I DME F +  L+KYF+H   +SFQRQLNLYGFRK  KG ++G + H  F RD+ + L  VRRT Q +  +K KTE
Sbjct:   60 SDAMRYPRTGKRGAPQVFPRKLYEILDNESEDTISWTESGHSFVIKDMETFVTSVLMKYFRHQKFSSFQRQLNLYGFRKISKGTETGAYCHEFFARDQTDKLRLVRRTPQVTGRSKAKTE 179          
BLAST of jgi.p|Trimin1|339873 vs. uniprot
Match: A0A7R9YBQ9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBQ9_9STRA)

HSP 1 Score: 131 bits (330), Expect = 7.410e-30
Identity = 67/119 (56.30%), Postives = 76/119 (63.87%), Query Frame = 0
Query:   10 VQNDLKRYPRFGKRGAPQAFATKLFELLSNESPDIVSWTPSGLAFRIHDMEKFTSECLIKYFKHNNAASFQRQLNLYGFRKSLKGEDSGGFQHASFQRDRPELLIEVRRTVQASQAAKR 128
            V  D KRYPR GKRGAPQ F  KLFELL  E   ++ W   G  F I DM+ FT E L +YFKH+   SFQRQLNLYGFRK  KGE  G + H  FQRD PE L +VRRT Q  ++  R
Sbjct:   41 VTEDYKRYPRTGKRGAPQVFPRKLFELLEKEDSAVIRWDEEGECFVIQDMDTFTRESLERYFKHHKFTSFQRQLNLYGFRKIAKGERCGYYVHPHFQRDHPEWLSKVRRTPQPGKSTPR 159          
BLAST of jgi.p|Trimin1|339873 vs. uniprot
Match: A0A7S2G7U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7U9_9STRA)

HSP 1 Score: 125 bits (314), Expect = 8.810e-30
Identity = 59/107 (55.14%), Postives = 76/107 (71.03%), Query Frame = 0
Query:   16 RYPRFGKRGAPQAFATKLFELLSNESPDIVSWTPSGLAFRIHDMEKFTSECLIKYFKHNNAASFQRQLNLYGFRKSLKGEDSGGFQHASFQRDRPELLIEVRRTVQA 122
            +YPR G+RGAPQ F  KL+E+L+NE  D++ WT SG +F I +ME F +E L+ YF+H   +SFQRQLNLYGFRK  KG D+G + H  F RD+PE L  VRR  Q+
Sbjct:   94 KYPRTGRRGAPQVFPRKLYEILTNERSDVIGWTSSGKSFIILEMEIFVNEILMNYFRHQKYSSFQRQLNLYGFRKIQKGPDTGAYAHEHFLRDQPESLTFVRRMPQS 200          
BLAST of jgi.p|Trimin1|339873 vs. uniprot
Match: A0A7S2CXJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CXJ7_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.770e-28
Identity = 66/143 (46.15%), Postives = 93/143 (65.03%), Query Frame = 0
Query:   16 RYPRFGKRGAPQAFATKLFELLSNESPDIVSWTPSGLAFRIHDMEKFTSECLIKYFKHNNAASFQRQLNLYGFRKSLKGEDSGGFQHASFQRDRPELLIEVRRTVQASQAAKRKT-------ETVDDGVP-EYVPASRSRMGS 150
            +YPR G+RGAPQ F  KL+E+L+ ES DI+SWT +G +F I +M+ F +E L+KYF+H   +SFQRQLNLYGFRK  KG D+G + H  F RD    L++VRR  Q++   ++ T       +  +DG+  E +P S   +GS
Sbjct:   72 KYPRTGRRGAPQVFPRKLYEILTLESSDIISWTENGTSFVIQEMDDFVNEILMKYFRHRKYSSFQRQLNLYGFRKIQKGPDTGAYAHEGFLRDDESQLVKVRRWAQSAGRQQKPTLIRAQSKDITEDGLSKEGIPESPESVGS 214          
BLAST of jgi.p|Trimin1|339873 vs. uniprot
Match: A0A6H5KMN3_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN3_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 3.950e-28
Identity = 58/105 (55.24%), Postives = 79/105 (75.24%), Query Frame = 0
Query:   19 RFGKRGAPQAFATKLFELLSNESPDIVSWTPSGLAFRIHDMEKFTSECLIKYFKHNNAASFQRQLNLYGFRKSLKGEDSGGFQHASFQRDRPELLIEVRRTVQAS 123
            R GKRGAPQAFA KL E+L+ ES   +SW  +G AF++HD+E+F+ + L KY++H+  +SFQRQLNLY FRK +KG D+GG+ H  F+RDRP+ L  VRR++  S
Sbjct:   33 RIGKRGAPQAFARKLAEILATESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDLYHVRRSISGS 137          
BLAST of jgi.p|Trimin1|339873 vs. uniprot
Match: A0A6V1QFS1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QFS1_HETAK)

HSP 1 Score: 125 bits (314), Expect = 6.790e-28
Identity = 57/108 (52.78%), Postives = 81/108 (75.00%), Query Frame = 0
Query:   16 RYPRFGKRGAPQAFATKLFELLSNESPDIVSWTPSGLAFRIHDMEKFTSECLIKYFKHNNAASFQRQLNLYGFRKSLKGEDSGGFQHASFQRDRPELLIEVRRTVQAS 123
            +YPR G+RGAPQAFA KL+E+L  E  D++SW  +G AF + D+++F+ E L+KYF+H+  ASFQRQLNLYGFRK  +G D+G + H  F++ +P+LL  VRR+  +S
Sbjct:    2 KYPRTGQRGAPQAFARKLYEILEVEPGDLLSWNAAGNAFFVRDIDRFSKEILMKYFRHSKFASFQRQLNLYGFRKITRGSDAGSYAHQYFRKGKPDLLSLVRRSQSSS 109          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|339873 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YGA3_9STRA2.060e-250100.00HSF-type DNA-binding-domain-containing protein n=1... [more]
A0A7S2BSE7_9STRA4.800e-3256.36Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2WKC6_9STRA2.900e-3156.52Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2WU52_9STRA1.050e-3057.89Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2R5C8_9STRA1.510e-3055.83Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7R9YBQ9_9STRA7.410e-3056.30Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2G7U9_9STRA8.810e-3055.14Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2CXJ7_9STRA1.770e-2846.15Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A6H5KMN3_9PHAE3.950e-2855.24HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
A0A6V1QFS1_HETAK6.790e-2852.78Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 377..397
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 402..435
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..205
NoneNo IPR availablePANTHERPTHR10015:SF206HEAT SHOCK TRANSCRIPTION FACTORcoord: 22..434
IPR000232Heat shock factor (HSF)-type, DNA-bindingPRINTSPR00056HSFDOMAINcoord: 66..78
score: 64.4
coord: 79..91
score: 73.85
IPR000232Heat shock factor (HSF)-type, DNA-bindingSMARTSM00415hsfneu3coord: 25..119
e-value: 3.5E-25
score: 99.7
IPR000232Heat shock factor (HSF)-type, DNA-bindingPFAMPF00447HSF_DNA-bindcoord: 29..118
e-value: 8.9E-25
score: 87.1
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 22..120
e-value: 3.0E-27
score: 97.1
IPR027725Heat shock transcription factor familyPANTHERPTHR10015HEAT SHOCK TRANSCRIPTION FACTORcoord: 22..434
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 26..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_99contigContig_99:143319..148914 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|339873mRNA_12241Tribonema minus UTEX_B_3156 mRNAContig_99 143319..149486 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|339873|MIX48636_66_33 ID=Trimin1|339873|MIX48636_66_33|Name=jgi.p|Trimin1|339873|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=501bp
MEPGDEESEVQNDLKRYPRFGKRGAPQAFATKLFELLSNESPDIVSWTPS
GLAFRIHDMEKFTSECLIKYFKHNNAASFQRQLNLYGFRKSLKGEDSGGF
QHASFQRDRPELLIEVRRTVQASQAAKRKTETVDDGVPEYVPASRSRMGS
AAGGAGGTARAEGGAKRKRAKDDGGAGGASGGGSGRRGGGGGGGGGGGGG
GDAVSAELYTSPAQLQVMAGGAVQQAAPEGYMPMAYPAMGLMEYSMLGIP
QMGAFGGLLLPPGAMTSLAMQYYYPGAAVAAAAAAPMGGDDAGAMAAAAA
QPAQLQHMMVPQYAPYLYGQAFGQTPYGATAAVDAQMQMQLQMMGYAQAY
APPAMGGGYAQGAVAEGEAQGGAGGGMTAEQQQMQAQLQAMQAVQQQQAI
MQAQVAHNGGGSGDSSDATSRSGSDGAAQRPQSQLTAAMSVADMAAAAAA
AMAAAAPPALPPQAGLREAGSGGVQALSLFGQEGRGRAAGGARASAAAAT
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000232HSF_DNA-bd
IPR036388WH-like_DNA-bd_sf
IPR027725HSF_fam
IPR036390WH_DNA-bd_sf