Trimin1|339782|MIX48545_4_100 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|339782
Unique Name	Trimin1\|339782\|MIX48545_4_100
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	174

Homology

[Close]

BLAST of jgi.p|Trimin1|339782 vs. uniprot
Match: A0A835YJI5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJI5_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.640e-18
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0

Query:   46 QAVIPSGSIGFNQEISLVDGHEAEGAAXXXXXXXXXXAVGGAVVDLSLDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVQAARFLHSAQYPQGDA 174
            QAVIPSGSIGFNQEISLVDGHEAEGAAXXXXXXXXXXAVGGAVVDLSLDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVQAARFLHSAQYPQGDA
Sbjct:   46 QAVIPSGSIGFNQEISLVDGHEAEGAAXXXXXXXXXXAVGGAVVDLSLDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVQAARFLHSAQYPQGDA 174

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|339782 vs. uniprot

BLAST of jgi.p|Trimin1|339782 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835YJI5_9STRA	1.640e-18	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..156

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_98	contig	Contig_98:549112..551191 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|339782	mRNA_14938	Tribonema minus UTEX_B_3156	mRNA	Contig_98 549049..551191 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|339782|MIX48545_4_100 ID=Trimin1|339782|MIX48545_4_100|Name=jgi.p|Trimin1|339782|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=174bp
MESSGGGGGGSSARSARRASAAASAAAAGDGDSKPPADAAAAAAAQAVIP
SGSIGFNQEISLVDGHEAEGAAAAAAAAPAPAAVGGAVVDLSLDSDEEDD
GGGGGGGGGGAHAMIPPPAAAAAAALIPPAQLHQPQYLPPLHQQQPQQQQ
QHQHHHAVQAARFLHSAQYPQGDA