Trimin1|337930|MIX46693_6_13 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|337930
Unique NameTrimin1|337930|MIX46693_6_13
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length789
Homology
BLAST of jgi.p|Trimin1|337930 vs. uniprot
Match: A0A835YHV4_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHV4_9STRA)

HSP 1 Score: 897 bits (2317), Expect = 0.000e+0
Identity = 788/788 (100.00%), Postives = 788/788 (100.00%), Query Frame = 0
Query:    1 MGETAGAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNILAAFCVNAELSAVTPFLPAYQLLLSPXXXXXXXXLTCCLSPAXXXXXXXXXXXXXXXXXYAEDYLGASAEEVGVCIALYPLAVVVTGPAAGWGSTRFGRGAVAMGGAVALAAGTLLFGAAATIYGCMAARALQAXXXXXXXXXXXXXXXXXXXXXXASVVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGQASLSISTTAMMMSVMRDDFKHGQAVQQLFVGLGYVLGPILGGAIYDACGFEATFLVLSIFPVALAIVMPLLLSRAGIPLFARAPALASAEADCQATNEIAPPKEFWHRAMRLVATSPAPXXXXXXXXXXXXXXXXXLMPTHXXXXXXXXXXXXXXXXXXXXXATACASAAFLYSIVFGLLESTFEIHAAAALGVSSFGTGLAFALPNGVCALTSLLTAPLVNRFGYRAPKSFRPLSIGACVYAXXXXXXXXXXXXXXXXACITTTGVXXXXXXXXXXXXXXXXXXXXXXXXLVIMATSVWLLGPLPLLDGLFVSRAVTWIIFMTALVSLGFGIALLLVPSLPAMQVRTVELDVEVDIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVQARHGVMEPLLREAVADAASTAYTVANSTGEVLGPVVGAACVAHLWQTTEPTCIAAADASDDCESGFAWTATICGAAVLICAAFIRLSVPARLGRAHRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKPLREALLPPNQIDL 788
            MGETAGAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNILAAFCVNAELSAVTPFLPAYQLLLSPXXXXXXXXLTCCLSPAXXXXXXXXXXXXXXXXXYAEDYLGASAEEVGVCIALYPLAVVVTGPAAGWGSTRFGRGAVAMGGAVALAAGTLLFGAAATIYGCMAARALQAXXXXXXXXXXXXXXXXXXXXXXASVVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGQASLSISTTAMMMSVMRDDFKHGQAVQQLFVGLGYVLGPILGGAIYDACGFEATFLVLSIFPVALAIVMPLLLSRAGIPLFARAPALASAEADCQATNEIAPPKEFWHRAMRLVATSPAPXXXXXXXXXXXXXXXXXLMPTHXXXXXXXXXXXXXXXXXXXXXATACASAAFLYSIVFGLLESTFEIHAAAALGVSSFGTGLAFALPNGVCALTSLLTAPLVNRFGYRAPKSFRPLSIGACVYAXXXXXXXXXXXXXXXXACITTTGVXXXXXXXXXXXXXXXXXXXXXXXXLVIMATSVWLLGPLPLLDGLFVSRAVTWIIFMTALVSLGFGIALLLVPSLPAMQVRTVELDVEVDIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVQARHGVMEPLLREAVADAASTAYTVANSTGEVLGPVVGAACVAHLWQTTEPTCIAAADASDDCESGFAWTATICGAAVLICAAFIRLSVPARLGRAHRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKPLREALLPPNQIDL
Sbjct:    1 MGETAGAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNILAAFCVNAELSAVTPFLPAYQLLLSPXXXXXXXXLTCCLSPAXXXXXXXXXXXXXXXXXYAEDYLGASAEEVGVCIALYPLAVVVTGPAAGWGSTRFGRGAVAMGGAVALAAGTLLFGAAATIYGCMAARALQAXXXXXXXXXXXXXXXXXXXXXXASVVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGQASLSISTTAMMMSVMRDDFKHGQAVQQLFVGLGYVLGPILGGAIYDACGFEATFLVLSIFPVALAIVMPLLLSRAGIPLFARAPALASAEADCQATNEIAPPKEFWHRAMRLVATSPAPXXXXXXXXXXXXXXXXXLMPTHXXXXXXXXXXXXXXXXXXXXXATACASAAFLYSIVFGLLESTFEIHAAAALGVSSFGTGLAFALPNGVCALTSLLTAPLVNRFGYRAPKSFRPLSIGACVYAXXXXXXXXXXXXXXXXACITTTGVXXXXXXXXXXXXXXXXXXXXXXXXLVIMATSVWLLGPLPLLDGLFVSRAVTWIIFMTALVSLGFGIALLLVPSLPAMQVRTVELDVEVDIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVQARHGVMEPLLREAVADAASTAYTVANSTGEVLGPVVGAACVAHLWQTTEPTCIAAADASDDCESGFAWTATICGAAVLICAAFIRLSVPARLGRAHRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKPLREALLPPNQIDL 788          
BLAST of jgi.p|Trimin1|337930 vs. uniprot
Match: A0A835YS01_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS01_9STRA)

HSP 1 Score: 297 bits (761), Expect = 9.290e-88
Identity = 244/719 (33.94%), Postives = 312/719 (43.39%), Query Frame = 0
Query:   41 LNILAAFCVNAELSAVTPFLPAYQLLLSPXXXXXXXXLTCCLSPAXXXXXXXXXXXXXXXXXYAEDYLGASAEEVGVCIALYPLAVVVTGPAAGWGSTRFGRGAVAMGGAVALAAGTLLFGAAATIYGCMAARALQAXXXXXXXXXXXXXXXXXXXXXXASVVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGQASLSISTTAMMMSVMRDDFKHGQAVQQLFVGLGYVLGPILGGAIYDACGFEATFLVLSIFPVALAIVMPLLLSRAGIPLFAR-----------APALASAEAD------CQAT---NEIAPPKEFWHRAMRLVATSPAPXXXXXXXXXXXXXXXXXLMPTHXXXXXXXXXXXXXXXXXXXXXATACASAAFLYSIVFGLLESTFEIHAAAALGVSSFGTGLAFALPNGVCALTSLLTAPLVNRFGYRAPKSFRPLSIGACVYAXXXXXXXXXXXXXXXXACITTTGVXXXXXXXXXXXXXXXXXXXXXXXXLVIMATSVWLLGPLPLLDGLFVSRAVTWIIFMTALVSLGFGIALLLVPSLPAMQVRTVELDVEVDIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVQARHGVMEPLLREAVADAASTAYTVANSTGEVLGPVVGAACVAHLWQTTEPTCIAAADASDDCESGFAWTATICGAAVLICAAFIRLSVPARLG--RAH 737
            LN +AAFCVN  +SAV+PF P Y ++                                         LGAS E VG+C+A +PLA ++TG  AGW  +R GRGAVAM GA+ALAAGTL FG + T+  CMAARALQ                                                                   G G A+++ISTTA+MMSVM+ DFK G A+QQ+FVGLGY+LGP LGG +Y+  GFE TFLVL+  P+ LA+VMP LL  AG+PL  R           +PA   AEA       C  T    + A P+  W  A+ LV  +                                              A AC S A L+S  FG L+STFE H   +LG + F TGL ++LP    +L SLLT P+V+R G++            C+ A                                                LV+MA ++WL+GPLPLL  +F  RAVTW+I++ AL++LG GIALLLVPSLPAMQ                                                 A  G  E    EA++DA ST YT   + GEVLGPV+GA+ VA +WQ  E TC  +    ++C SGFAW A+  G  +L+CA  I  +VP  LG  RAH
Sbjct:   36 LNAIAAFCVNTLISAVSPFFPQYAVIS----------------------------------------LGASGELVGLCLAAFPLASMMTGSLAGWACSRLGRGAVAMAGALALAAGTLAFGLSGTMPLCMAARALQ-------------------------------------------------------------------GAGAAAINISTTALMMSVMQADFKSGLAIQQMFVGLGYILGPSLGGGVYELGGFEVTFLVLACLPLTLALVMPTLLRAAGLPLGHRNPPSTVPTAPASPAQGDAEASGLEDATCPPTAAEGKAATPRPSWRGALLLVLRN--------------------------------------------GGALACCSCALLFSAAFGFLDSTFEDHLEQSLGTTPFTTGLTYSLPAVTYSLGSLLTVPVVDRVGFQR-----------CIMAG-----------------------------------------------LVVMAAAMWLIGPLPLLGFVFFDRAVTWVIWIAALLALGLGIALLLVPSLPAMQASV---------------------------------------GLRRGAAAAAGAAEE--DEAISDATSTVYTGFMNAGEVLGPVIGASAVARMWQVKEVTCTLS---DEECASGFAWAASAFGLIILLCALMIWWAVPRHLGCARAH 501          
BLAST of jgi.p|Trimin1|337930 vs. uniprot
Match: A0A835YVS3_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVS3_9STRA)

HSP 1 Score: 124 bits (312), Expect = 4.420e-26
Identity = 136/517 (26.31%), Postives = 188/517 (36.36%), Query Frame = 0
Query:  244 GVGQASLSISTTAMMMSVMRDDFKHGQAVQ--QLFVGLGYVLGPILGGAIYDACGFEATFLVLSIFPVALAIVMPLLLSRAGIPLFARAP-----ALASAEADCQATNE---IAPPKEFWHRAMRLVATSPAPXXXXXXXXXXXXXXXXXLMPTHXXXXXXXXXXXXXXXXXXXXXATACASAAFLYSIVFGLLESTFEIHAAAALGVSSFGTGLAFALPNGVCALTSLLTAPLVNRFGYRAPKSFRPLSIGACVYAXXXXXXXXXXXXXXXXACITTTGVXXXXXXXXXXXXXXXXXXXXXXXXLVIMATSVWLLGPLPLLDGLFVSRAVTWIIFMTALVSLGFGIALLLVPSLPAMQVRTVELDVE--------------VDIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVQARHGVMEPLLREAVADAASTAYTVANSTGEVLGPVVGAACVAHLWQTTEPTCIAAADASDDCESGFAWTATICGAAVLICAAFIRLSVPARLGRA 736
            G G A++ I  T+++M+    D +  +A+   +LF G+GYVLGP LGG +Y   GF  TF  L+  P A A+ +P LL+ AG P     P     A+    AD     E   +AP    W RA+R V  S                                                AC   A LYS VFG L++TFE H   AL      TGL  ++P    ++ SL T P V R+GY             C+                                                                          A TW ++  A + LG+ +A + +P+LPAMQ    E +                VD                                    ++      +     A  +AA+TA++ A STGEVLGP++G+A VAHLW+  E TC     A   C SG+AW +T+ GAA+L C A I  +VP  LG A
Sbjct:  171 GAGAAAVYIPMTSLLMATCAGDGELARALSLSELFTGIGYVLGPALGGVLYSIGGFMLTFASLAALPAAFALALPALLAAAGTPFRRLQPRAAVTAVTDVTADGGGVAEKAGLAP----WVRALRPVLCS--------------------------------------------NGVLACCVCASLYSSVFGFLDATFERHLELALASPHILTGLMCSVPAATYSIGSLATFPAVRRYGY-----------ARCM--------------------------------------------------------------------------AATWAVWGAAQLLLGYSVAFVFIPALPAMQEMLAEAEARGXXXXXXXXXXXRNVDAEALHAAAATSFNGFISIADKPKQQQQPTKVERKVTMERXXXXXKAKGSAASRNAAATAFSSAKSTGEVLGPILGSAAVAHLWRVDEVTCDGGGIAGA-CLSGYAWASTLLGAAILACTALIWATVPRHLGMA 553          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|337930 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835YHV4_9STRA0.000e+0100.00Major facilitator superfamily domain-containing pr... [more]
A0A835YS01_9STRA9.290e-8833.94Major facilitator superfamily domain-containing pr... [more]
A0A835YVS3_9STRA4.420e-2626.31Major facilitator superfamily domain-containing pr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 177..496
e-value: 7.2E-17
score: 61.3
IPR036259MFS transporter superfamilyGENE3D1.20.1250.20MFS general substrate transporter like domainscoord: 510..735
e-value: 2.8E-5
score: 25.6
IPR036259MFS transporter superfamilyGENE3D1.20.1250.20MFS general substrate transporter like domainscoord: 213..322
e-value: 7.0E-8
score: 34.3
IPR036259MFS transporter superfamilyGENE3D1.20.1250.20MFS general substrate transporter like domainscoord: 405..509
e-value: 1.2E-5
score: 26.7
IPR036259MFS transporter superfamilyGENE3D1.20.1250.20MFS general substrate transporter like domainscoord: 75..200
e-value: 4.2E-15
score: 57.3
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 207..496
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 81..219
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 610..735
NoneNo IPR availablePANTHERPTHR23506FAMILY NOT NAMEDcoord: 213..497
coord: 609..725
coord: 510..592
coord: 80..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_9contigContig_9:1185246..1195566 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|337930mRNA_3613Tribonema minus UTEX_B_3156 mRNAContig_9 1185246..1195566 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|337930|MIX46693_6_13 ID=Trimin1|337930|MIX46693_6_13|Name=jgi.p|Trimin1|337930|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=789bp
MGETAGAAAVTAAGAPPELMLTHQPPTVVARSSEEKALLLLNILAAFCVN
AELSAVTPFLPAYQLLLSPAAFCVNAKLTCCLSPAAFCVNAELSAVSPFF
PVYAEDYLGASAEEVGVCIALYPLAVVVTGPAAGWGSTRFGRGAVAMGGA
VALAAGTLLFGAAATIYGCMAARALQATGTMLFGAAATIYGCMAARALQA
SVVLFGAAATIYGCMAARALQASAGGHTAVWRIYGCMAARVLQGVGQASL
SISTTAMMMSVMRDDFKHGQAVQQLFVGLGYVLGPILGGAIYDACGFEAT
FLVLSIFPVALAIVMPLLLSRAGIPLFARAPALASAEADCQATNEIAPPK
EFWHRAMRLVATSPAPATNEVAPSKEYWRYTMRLMPTHEVAPPKEYWRRA
MRLVVTSPAATACASAAFLYSIVFGLLESTFEIHAAAALGVSSFGTGLAF
ALPNGVCALTSLLTAPLVNRFGYRAPKSFRPLSIGACVYALALLLTVPLV
NRFGYRACITTTGVYALTSLLTVPLVNRFGYRACITTGLVIMATSVWLLG
PLPLLDGLFVSRAVTWIIFMTALVSLGFGIALLLVPSLPAMQVRTVELDV
EVDIVSRAVTWVIFMTALVLLGVGIALLLVPSLPAMQEAVQARHGVMEPL
LREAVADAASTAYTVANSTGEVLGPVVGAACVAHLWQTTEPTCIAAADAS
DDCESGFAWTATICGAAVLICAAFIRLSVPARLGRAHRGGGSGSGSSGGK
YQPAVTAAAAAPRATVVAAAAARKPLREALLPPNQIDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR036259MFS_trans_sf