Trimin1|337758|MIX46521_2_26 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|337758
Unique Name	Trimin1\|337758\|MIX46521_2_26
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	186

Homology

[Close]

BLAST of jgi.p|Trimin1|337758 vs. uniprot
Match: A0A835YR25_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR25_9STRA)

HSP 1 Score: 374 bits (959), Expect = 4.700e-131
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0

Query:    1 MSVPEVRVFQVMNEVRLLPKEAWSLNWESHMGLQPSAKFSLTQRSRRYYAGAVVSKRLVELEVKDLIGTPLPRLPDQLSRLKIVQYSRVRSIGIPQVKHIGCLEIDDRTDAGSECWVRKFLEGLKCSVQSLSLKTSHWAACTALSLPRGIETAHFEKRLDYTGVRKGLHRAPHSSTSSIGSAFGA 185
            MSVPEVRVFQVMNEVRLLPKEAWSLNWESHMGLQPSAKFSLTQRSRRYYAGAVVSKRLVELEVKDLIGTPLPRLPDQLSRLKIVQYSRVRSIGIPQVKHIGCLEIDDRTDAGSECWVRKFLEGLKCSVQSLSLKTSHWAACTALSLPRGIETAHFEKRLDYTGVRKGLHRAPHSSTSSIGSAFGA
Sbjct:    1 MSVPEVRVFQVMNEVRLLPKEAWSLNWESHMGLQPSAKFSLTQRSRRYYAGAVVSKRLVELEVKDLIGTPLPRLPDQLSRLKIVQYSRVRSIGIPQVKHIGCLEIDDRTDAGSECWVRKFLEGLKCSVQSLSLKTSHWAACTALSLPRGIETAHFEKRLDYTGVRKGLHRAPHSSTSSIGSAFGA 185

[Close]

BLAST of jgi.p|Trimin1|337758 vs. uniprot
Match: A0A836CBH6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBH6_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 1.870e-16
Identity = 54/172 (31.40%), Postives = 86/172 (50.00%), Query Frame = 0

Query:    2 SVPEVR-VFQVMNEVRLLPKEAWSLNWESHMGLQPSAKFSLTQRSRRYYAGAVVSKRLVELEVKDLIGTPLPRLPDQLSRLKIVQYSRVRSIGIPQVKHIGCLEIDDRTDAGSECWVRKFLEGLKCSVQSLSLKTSHWAACTALSLPRGIETAHFEKRLDYTGVRKGLHRAP 172
            ++P++  V  VM + RLL K AWSL W+ H+ LQP  +++L   S+++Y  A +++R++EL+V DLIG  LP  P+                      H+ CL +  R    S   + +   G +  V +L L+++ W  C  L  P+G+    FE  LD    R+ L  AP
Sbjct:  321 TMPDIEIVLVVMAQARLLTKSAWSLCWKLHLRLQPMVRYNLDSVSQQHYEAAALNRRIIELDVTDLIGIGLPHFPE----------------------HLECLRVSQRAGVWSPASLLQLKTGAQ--VHTLRLRSNKWHKCKELRFPKGV--TKFEGVLD-PYARRRLRWAP 465

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|337758 vs. uniprot

BLAST of jgi.p|Trimin1|337758 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835YR25_9STRA	4.700e-131	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CBH6_9STRA	1.870e-16	31.40	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_9	contig	Contig_9:590393..590950 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|337758	mRNA_3554	Tribonema minus UTEX_B_3156	mRNA	Contig_9 590337..590950 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|337758|MIX46521_2_26 ID=Trimin1|337758|MIX46521_2_26|Name=jgi.p|Trimin1|337758|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=186bp
MSVPEVRVFQVMNEVRLLPKEAWSLNWESHMGLQPSAKFSLTQRSRRYYA
GAVVSKRLVELEVKDLIGTPLPRLPDQLSRLKIVQYSRVRSIGIPQVKHI
GCLEIDDRTDAGSECWVRKFLEGLKCSVQSLSLKTSHWAACTALSLPRGI
ETAHFEKRLDYTGVRKGLHRAPHSSTSSIGSAFGA*