Trimin1|337642|MIX46405_2_8 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|337642
Unique NameTrimin1|337642|MIX46405_2_8
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length703
Homology
BLAST of jgi.p|Trimin1|337642 vs. uniprot
Match: A0A836C8Q2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Q2_9STRA)

HSP 1 Score: 1274 bits (3297), Expect = 0.000e+0
Identity = 702/702 (100.00%), Postives = 702/702 (100.00%), Query Frame = 0
Query:    1 MYSEPKATAGAGNGSVRSKYQQHVKTELRGYQERICMDMAKGNHLVVLPTGAGKTLVAAECIAAELWKQPTKRALFLVPTRNLVHQQAQVIEGETGLDVAELKGGNALRIGCRVLVATPGAYQQQGASVLKLASFSVIVVDEVHHTLGKHLYNVIARELRALPKSEPRPRIVGLSASPTYAVGEQQDCGPQRVADVRGGRTAGMYVRTIITYTYPGQMLKXXXXXXXXXXXXXYGRIVGLSASPTYAVGERQVVAKLRNLCDVLSIDAVHSATSEELVASGYHAVPAAVIHHSDNVPLVLEDVRKAARPNDPRADHELQDAFLRSIDSGSAHPLLLQLMEVAAALEAALARADADFVSPLRRAGPEAPPLAKVKEWGGIALRQAEGVHAATPGLRVGVGKGIGDASAGLSTAGRLHNAYYEEYYGVPGAKRRAAAXXXXXXXXXXXXXXXESVETCHEPLYRALAHVCEAARVGVISSQVDVELSAAYVHMAWTTLGLAAGRCGRCGRPCAPALSETLARLAEDCGALLQRDAGWAPSPKRKASASADVLAGSSSPKRRASEAEGEAGKAAGERAFIVCPGTQTHCRRRHRCXXXXXXXXXXXXXXQHRITTHILNHFVASDAELSALFRSACAYAAGTPAAAGLRMSSTDLRDRFTNFRLGHFNLIFATCVAEEGLDLPCANCVIRFDPMHTPVSYVQVRM 702
            MYSEPKATAGAGNGSVRSKYQQHVKTELRGYQERICMDMAKGNHLVVLPTGAGKTLVAAECIAAELWKQPTKRALFLVPTRNLVHQQAQVIEGETGLDVAELKGGNALRIGCRVLVATPGAYQQQGASVLKLASFSVIVVDEVHHTLGKHLYNVIARELRALPKSEPRPRIVGLSASPTYAVGEQQDCGPQRVADVRGGRTAGMYVRTIITYTYPGQMLKXXXXXXXXXXXXXYGRIVGLSASPTYAVGERQVVAKLRNLCDVLSIDAVHSATSEELVASGYHAVPAAVIHHSDNVPLVLEDVRKAARPNDPRADHELQDAFLRSIDSGSAHPLLLQLMEVAAALEAALARADADFVSPLRRAGPEAPPLAKVKEWGGIALRQAEGVHAATPGLRVGVGKGIGDASAGLSTAGRLHNAYYEEYYGVPGAKRRAAAXXXXXXXXXXXXXXXESVETCHEPLYRALAHVCEAARVGVISSQVDVELSAAYVHMAWTTLGLAAGRCGRCGRPCAPALSETLARLAEDCGALLQRDAGWAPSPKRKASASADVLAGSSSPKRRASEAEGEAGKAAGERAFIVCPGTQTHCRRRHRCXXXXXXXXXXXXXXQHRITTHILNHFVASDAELSALFRSACAYAAGTPAAAGLRMSSTDLRDRFTNFRLGHFNLIFATCVAEEGLDLPCANCVIRFDPMHTPVSYVQVRM
Sbjct:    1 MYSEPKATAGAGNGSVRSKYQQHVKTELRGYQERICMDMAKGNHLVVLPTGAGKTLVAAECIAAELWKQPTKRALFLVPTRNLVHQQAQVIEGETGLDVAELKGGNALRIGCRVLVATPGAYQQQGASVLKLASFSVIVVDEVHHTLGKHLYNVIARELRALPKSEPRPRIVGLSASPTYAVGEQQDCGPQRVADVRGGRTAGMYVRTIITYTYPGQMLKXXXXXXXXXXXXXYGRIVGLSASPTYAVGERQVVAKLRNLCDVLSIDAVHSATSEELVASGYHAVPAAVIHHSDNVPLVLEDVRKAARPNDPRADHELQDAFLRSIDSGSAHPLLLQLMEVAAALEAALARADADFVSPLRRAGPEAPPLAKVKEWGGIALRQAEGVHAATPGLRVGVGKGIGDASAGLSTAGRLHNAYYEEYYGVPGAKRRAAAXXXXXXXXXXXXXXXESVETCHEPLYRALAHVCEAARVGVISSQVDVELSAAYVHMAWTTLGLAAGRCGRCGRPCAPALSETLARLAEDCGALLQRDAGWAPSPKRKASASADVLAGSSSPKRRASEAEGEAGKAAGERAFIVCPGTQTHCRRRHRCXXXXXXXXXXXXXXQHRITTHILNHFVASDAELSALFRSACAYAAGTPAAAGLRMSSTDLRDRFTNFRLGHFNLIFATCVAEEGLDLPCANCVIRFDPMHTPVSYVQVRM 702          
BLAST of jgi.p|Trimin1|337642 vs. uniprot
Match: A0A6H5KX57_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX57_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 6.370e-45
Identity = 209/727 (28.75%), Postives = 288/727 (39.61%), Query Frame = 0
Query:    7 ATAGAGNGSVRSKYQQHVKTELRGYQERICMDMAKGNHLVVLPTGAGKTLVAAECIAAELWKQPTKRALFLVPTRNLVHQQAQVIEGETGLDVAELKGGNALRIGC-RVLVATPGAY---QQQGASVLKLASFSVIVVDEVHHTLGKHLYNVIARELRALPKSEPRPRIVGLSASPTYAVGEQQDCGPQRVADVRGGRTAGMYVRTIITYTYPGQMLKXXXXXXXXXXXXXYGRIVGLSASPTYAVGERQVVAKLRNLCDVLSIDAVHSATSEELVASGYHAVPAA----VIHHSDNVPLVLEDVRKAARPNDPRADHELQDAFLRSIDSGSAHPLLLQLMEVAAALEAALARADAD--------------FVSPLRRAGPEAPPLAKVKEWGG----IALRQAEGVH------AATPGLRVGVGKGIGDASAGLSTAGRLHNAYYEEYYGVPGAKRRAAAXXXXXXXXXXXXXXXESVETCHEPLYRALAHVCEAARVGVISSQVDVELSAAYVHMAWTTLGLAAGRCGRCGRPCAPALSETLARLAEDCGALLQRDAGWAPSPKRKASASADVLAGSSSPKRRASEAEGEAGKAAGERAFIVCPGTQTHCRRRHRCXXXXXXXXXXXXXXQHRITTHILNHFVASDAELSALFRSACAYAAGTPAAAGLRMSSTDLRDRFTNFRLGHFNLIFATCVAEEGLDLPCANCVIRFDPMHTPVSYVQVR 701
            A  GA   + R+   +     LRGYQ RI       N +VVLPTG+GKTL+AAE I     K+    ALFLVPTR +V QQA+ +   TGL V +  GG  L     ++LV+TP A+   QQ G   L+ ++F V++ DEVHH L  H Y  +A  LR    + P P      ASP  A G                                                  + R+VGL+AS +YAVG+ ++ A L  LC  L I A  +AT +EL A GY A+ AA    +    D+     +       P   +  HE+   F R    G++      LM    ++E A A                   F SP+  +G  AP     +EWG     +AL+ A          A  P    G G G G    G S A R      +   G P   RR++                 S  T H  L   L H  EA +  V+S +   + +A  + M   T           G P   A SE +                W    ++K SA  + +  +     +      +     G             C R                    R+TTH+L H +A+D  L+  F +AC YA+ +PA A L ++    +     FR G  NL+ AT VAEEG+D+P ANCV+R+D M   VS VQ R
Sbjct:    3 AGRGAAAATPRATAAKAPAKTLRGYQSRIANKCLHDNTIVVLPTGSGKTLLAAEAI-----KRLGPPALFLVPTRLMVDQQAEALGSWTGLSVTKYMGGAGLPPSTFKILVSTPQAFKAAQQNGIGHLQWSAFRVVIFDEVHHVLKDHPYRKLALSLRRSSLTPPPP------ASP--ATGSSS-----------------------------------------------HPRVVGLTASYSYAVGDAKIEASLTRLCHELRITATETATRQELEAGGYQAMGAAAEVLLDPRPDSAGTTDDTAPAGVVPEADQKPHEMGTTFFRREAKGTSTAFTRLLMACVRSMEEATAXXXXXXXXXXXSQPHQTLLFSSPMPPSGKLAP-----REWGAYAHKLALKAAXXXXXXXXXXAKMPETAAGRGMGGGGDFTGNSVAKRCTRCGIDANAGQP---RRSS-----------------SRPTLHL-LLAELEHWYEAVKTMVVSWEEREDDAATILDMFGCT-----------GSPSHRAASEAV----------------WPSDVRQKISAFWEAVPRTFRRYDKLKNVLLDKYDHHGXXXXXXXXXXXKKCFR-------------GIVFVVQRVTTHVLAHVIAADPRLAPRFSAACLYASSSPATASLSVTKAQAQASIEAFRSGSVNLLLATVVAEEGIDIPKANCVVRYDAMMHGVSMVQGR 603          
BLAST of jgi.p|Trimin1|337642 vs. uniprot
Match: A0A2V3IZ19_9FLOR (Endoribonuclease Dicer-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ19_9FLOR)

HSP 1 Score: 155 bits (392), Expect = 1.030e-36
Identity = 175/680 (25.74%), Postives = 247/680 (36.32%), Query Frame = 0
Query:   29 RGYQERICMDMAKGNHLVVLPTGAGKTLVAAECIAAELWKQPTKRALFLVPTRNLVHQQAQVIEGETGLDVAELKGGNALRIGCRVLVATPGAYQ--QQGASVLKLASFSVIVVDEVHHTLGKHLYNVIARELRALPKSEPRPRIVGLSASPTYAVGEQQDCGPQRVADVRGGRTAGMYVRTIITYTYPGQMLKXXXXXXXXXXXXXYGRIVGLSASPTYAVGERQVVAKLRNLCDVLSIDAVHSATSEELVASGYHAVPAAVIHHSDNVPLVLEDVRKAARPNDPRADHELQDAFLRSIDSGSAHPLLLQLMEVAAALEAALARADADFVSPLRRAGPEAPPLAKVKEWGGIALRQAEGVHAATPGLRVGVGKGIGDASAGLSTAGRLHNAYYEEYYGVPGAKRRAAAXXXXXXXXXXXXXXXESVETCHEPLYRALAHVCEAARVGVISSQVDVELSAAYVHMAWTTLGLAAG----RCGRCGRPCAPALSET-LARLAEDCGALLQRDAGWAPSPKRKASASADVLAGSSSPKRRASEAEGEAGKAAGERAFIVCPGTQTHCRRRHRCXXXXXXXXXXXXXXQHRITTHILNHFVASDAELSALFRSACAYAAGTPAAAGLRMSSTDLRDRFTNFRLGHFNLIFATCVAEEGLDLPCANCVIRFDPMHTPVSYVQVR 701
            R YQ+RI       N LVVLPTGAGKTL+A E I     +  +  ALF+VPT  LV QQ++ I   T   VA+L GG +L     V+VATP  +   Q     L  A F  +V DEVHH L KH Y  +A  L+    + PR                                                                    +VGL+AS TYA+ +++    L+ LC+     AV +A + EL + GYHA  A       NV  +   V     P   R  H +   FL   ++  A     Q+ +V  ++E+ +   D    S LR        +  V++W G   ++A                               HN                                    +     L   L H  EA R+ +++ + D   +  ++ M    L  A       C R  R     ++     RL      LLQ+DA      +R+A   A                          R  I                             Q R+ TH++ H++ SD +L A+ R  C YA+ T A   L +S +   +R   FR G  NL+ AT VAEEG+D+P ANCVIRFD + + VS+VQ R
Sbjct:   15 RPYQQRIIDQAVLKNTLVVLPTGAGKTLIATEVI-----RTLSPPALFIVPTVLLVKQQSEAIAAHTNYKVAQLHGGKSLPHSWHVVVATPACFHATQSAYPSLAWARFRSVVFDEVHHALKKHPYRTLALSLKRCKSAHPR--------------------------------------------------------------------VVGLTASFTYALAQQRATNVLKTLCNEFQFSAVQTAPAHELKSGGYHASSAGST--PSNVQPLARTVPANVLPPQQRQPHLMLHTFLDRCEAKQATQTAQQIFQVVLSMESVVHARDRSLDSQLRH-------VRNVRKWSGNTFKRAT-----------------------------AHN------------------------------------QQIMRTLLTQLCHWYEALRLLIVTWEEDEFAAVWFLKMMKCNLNDAIQVWPEHCARHVRSFWYRVNTLQFDRLVCLKQVLLQQDA------QRRADGVAF-------------------------RGIIFV---------------------------QQRVYTHMIEHYIESDQQLQAVLRCGCVYASSTSATPLLSVSKSKAAERIEAFRTGAINLLIATSVAEEGMDIPAANCVIRFDTVQSTVSFVQGR 489          
BLAST of jgi.p|Trimin1|337642 vs. uniprot
Match: A0A7S4V2U7_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4V2U7_9DINO)

HSP 1 Score: 137 bits (344), Expect = 3.910e-30
Identity = 118/363 (32.51%), Postives = 160/363 (44.08%), Query Frame = 0
Query:   27 ELRGYQERICMDM-AKGNHLVVLPTGAGKTLVAAECIAAELWKQPTKRALFLVPTRNLVHQQAQVIEGETGLDVAELKGGNALRIGCRVLVATPGAYQ---QQGASVLKLASFSVIVVDEVHHTLGKHLYNVIARELRALPKSEPRPRIVGLSASPTYAVGEQQDCGPQRVADVRGGRTAGMYVRTIITYTYPGQMLKXXXXXXXXXXXXXYGRIVGLSASPTYAVGERQVVAKLRNLCDVLSIDAVHSATSEELVASGYHAVPAAVIHHSDNVPLVLEDVRKAARPNDPRADHELQDAFLRSIDSGSAHPLLLQLMEVAAALEAALARADADFVSPLRRAGPEAPPLAKVKEWGGIALRQAE 385
            ELR YQ RI     A GN +VVLPTGAGKTL+AAE I     K+     LFLVPT  LV QQA+ +   T L V E  GG  L    +VLV+TP A+Q    +G   L  ++F ++V DEVHH L  H Y  +A+ L  +  S PR                                                                    ++GL+AS TYAVGE+QV A +R LC  L I ++ SAT EEL +SGYHA+ A       ++P     V     P   R  H + + F   + + ++     +L    +A+EA ++ AD +F +PL            +K WG  A R  +
Sbjct:    2 ELRPYQSRIVGQAEASGNTVVVLPTGAGKTLIAAELI-----KRVGGTCLFLVPTCLLVEQQAKAVGKWTKLSVGEYMGGATLPSRFQVLVSTPKAFQVAQAKGTVSLAWSAFRLVVFDEVHHVLKDHPYRKLAQHLAQVNGSAPR--------------------------------------------------------------------VLGLTASLTYAVGEKQVEAAIRRLCTDLRIASMASATDEELRSSGYHALKAKAEVEPVDIPGA---VPAGVVPAAWRKPHMMHETFFERLRNNTSTLAAQRLYAAVSAMEAQVSSADPEFRTPLHNRS--------LKAWGEYANRNKD 280          
BLAST of jgi.p|Trimin1|337642 vs. uniprot
Match: A0A7S1FQB5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FQB5_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.180e-29
Identity = 178/703 (25.32%), Postives = 261/703 (37.13%), Query Frame = 0
Query:   28 LRGYQERICMDMAKGNHLVVLPTGAGKTLVAAECIAAELWKQPTKRALFLVPTRNLVHQQAQVIEGETGLD---VAELKGGNAL-----------RIGCRVLVATPGAY---QQQGASVLKLASFSVIVVDEVHHTLGKHLYNVIARELRAL----PKSEPRPRIVGLSASPTYAVGEQQDCGPQRVADVRGGRTAGMYVRTIITYTYPGQMLKXXXXXXXXXXXXXYGRIVGLSASPTYAVGERQVVAKLRNLCDVLSIDAVHSATSEELVASGYHAVPAAVIHHSDNVPLVLEDVRKAARPNDPRADHELQDAFLRSIDSGSAHPLLLQLMEVAAALEAALARA-DADFVSPLRRAGPEAPPLAKVKEWGGIALRQAEGVHAATPGLRVGVGKGIGDASAGLSTAGRLHNAYYEEYYGVPGAKRRAAAXXXXXXXXXXXXXXXESVETCHEPLYRALAHVCEAARVGVISSQVDVELSAAYVHMAWTTLGLAAGRCGRCGRPCAPALSETLARLAEDCGALLQRDAGWAPSPKRKASAS-------ADVLAGSSSPKRRASEAEGEAGKAAGERAFIVCPGTQTHCRRRHRCXXXXXXXXXXXXXXQHRITTHILNHFVASDAELSALFRSACAYAAGTPAAAGLRMSSTDLRDRFTNFRLGHFNLIFATCVAEEGLDLPCANCVIRFDPMHTPVSYVQVR 701
            LR YQ++I   +   N +V+LPTGAGKT++ AE +     ++  KR LFLVPT NLVHQQA+ I    G     V EL GG  +                VLV+TP A+   Q++    L   S+ ++V DEVHH L +H Y  IA  + +       SEPR R                                                                 ++VGL+AS +Y+V +  +   +R L   + +DA+ +AT EEL+A GYH+       H+    + L+DV   A P   R  H + + F R ++          L+      E AL R   +DF SPL      A P  K+ +WG    + A+      PG+                 AGR      E++Y                                            E+ R+ +IS + + E S  ++ M                                    +L  D       +RK SA         D+    +  K+   +    +  +  +   IV                            Q R+T HI++ ++  D  LSA  +SA  YA  +PA   L ++         +FR G  NL+ +T VAEEGLD+P ANCVIRFDP+   VS+VQ R
Sbjct:   25 LRPYQKKIVDSIRDQNVIVLLPTGAGKTVIPAEHV-----RETGKRTLFLVPTVNLVHQQAKFIREWCGAGSEAVGELVGGKQIPDPFLQTLVRGEGNPSVLVSTPKAFLMAQERDPRRLCWNSWDLVVFDEVHHVLKEHPYRKIALSVASANAKRAPSEPRSRT----------------------------------------------------------------QMVGLTASLSYSVSDAAIKRCIRTLMTEMQMDALCTATPEELLAGGYHS-------HAAAPEIALDDVHLEACPPADRKPHLMLETFWRRVEGKGCTEYAEDLLRAIKRREGALRRERPSDFRSPL------AEPELKMADWGVRMHKMAQRFDREDPGV-----------------AGRFRE--LEQWY--------------------------------------------ESLRILIISWEENREGSVLFLKM------------------------------------MLNDD-------ERKESAEFFHKHDREDIYVRLTQLKKVLLDKTSVSNSSNADFCGIV--------------------------FVQQRVTAHIIDFYLKRDRTLSARIKSAFLYAVSSPATPSLSLNKGTANSVLHDFRKGKLNLLVSTVVAEEGLDVPSANCVIRFDPVLNAVSHVQGR 513          
BLAST of jgi.p|Trimin1|337642 vs. uniprot
Match: A0A812IWI1_SYMPI (CFAP61 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812IWI1_SYMPI)

HSP 1 Score: 136 bits (342), Expect = 3.830e-29
Identity = 110/341 (32.26%), Postives = 150/341 (43.99%), Query Frame = 0
Query:   30 GYQERICMDM-AKGNHLVVLPTGAGKTLVAAECIAAELWKQPTKRALFLVPTRNLVHQQAQVIEGETGLDVAELKGGNALRIGCRVLVATPGAYQQ---QGASVLKLASFSVIVVDEVHHTLGKHLYNVIARELRALPKSEPRPRIVGLSASPTYAVGEQQDCGPQRVADVRGGRTAGMYVRTIITYTYPGQMLKXXXXXXXXXXXXXYGRIVGLSASPTYAVGERQVVAKLRNLCDVLSIDAVHSATSEELVASGYHAVPAAVIHHSDNVPLVLEDVR-KAARPNDPRADHELQDAFLRSIDSGSAHPLLLQLMEVAAALEAALARADADFVSPLRRAGP 365
            GYQERI  ++ A GN +VVLPTGAGKTL+A+E I              LVPT  LV QQA+     TGL VAE  GG ++     VLV+TP A+Q    +GA+  +   F ++V DEVHH L  H Y  +A  L  L    P+                                                                    ++GLSAS TYA+GER+V + L  +C  L+I  + +A+  EL A GYH+ PA  +     +P+ L +V  +   P + R  H +   F      G +     QL+ V   +EAA+A  DA F SPL+   P
Sbjct: 1997 GYQERIVTEVRAAGNAIVVLPTGAGKTLIASELITG-------LGPPCLVPTCMLVEQQARAAREWTGLQVAEFMGGVSVPQRFDVLVSTPKAFQMTQSRGAASFRFQGFKLVVFDEVHHVLKDHPYRKLALSLSKLTDGRPQ--------------------------------------------------------------------VLGLSASLTYAIGERKVESDLTRICRELNIQHMATASENELEACGYHSRPAEAV-----LPVSLPNVTPEGVLPVERRKPHLMASKFWERAQQGKSTQFTKQLLSVVRLMEAAVAEVDASFESPLQHPAP 2257          
BLAST of jgi.p|Trimin1|337642 vs. uniprot
Match: A0A812RBN0_9DINO (DCL2A protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812RBN0_9DINO)

HSP 1 Score: 127 bits (319), Expect = 5.930e-27
Identity = 81/164 (49.39%), Postives = 103/164 (62.80%), Query Frame = 0
Query:   27 ELRGYQERICMD-MAKGNHLVVLPTGAGKTLVAAECIAAELWKQPTKRALFLVPTRNLVHQQAQVIEGETGLDVAELKGGNALRIGCRVLVATPGAY---QQQGASVLKLASFSVIVVDEVHHTLGKHLYNVIARELRALPKSEPRPRIVGLSASPTYAVGEQQ 186
            +LRGYQ+RI  D +  GN +VVLPTGAGKTL     IA+EL K+     LFLVPT  LV QQA+ I   TGL VAE  GG ++     VLV+TP A+   Q +G    +  +F ++V DEVHH L +H Y  +A  L  LP   P+  ++GLSAS TYAVGEQ+
Sbjct:   18 QLRGYQQRIVDDALTTGNTIVVLPTGAGKTL-----IASELMKRLGPGCLFLVPTCLLVEQQAKAIREWTGLRVAEFMGGASMPQQFDVLVSTPKAFHTMQAKGVRSFRWDAFKLVVFDEVHHVLKEHPYRQLALSLSRLPAGPPQ--VLGLSASLTYAVGEQR 174          
BLAST of jgi.p|Trimin1|337642 vs. uniprot
Match: A0A1Q9EU77_SYMMI (Endoribonuclease Dicer-like 2a n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9EU77_SYMMI)

HSP 1 Score: 125 bits (313), Expect = 3.130e-26
Identity = 80/162 (49.38%), Postives = 103/162 (63.58%), Query Frame = 0
Query:   27 ELRGYQERICMD-MAKGNHLVVLPTGAGKTLVAAECIAAELWKQPTKRALFLVPTRNLVHQQAQVIEGETGLDVAELKGGNALRIGCRVLVATPGAYQQ---QGASVLKLASFSVIVVDEVHHTLGKHLYNVIARELRALPKSEPRPRIVGLSASPTYAVGE 184
            ELR YQ R+  + +A GN LVVLPTGAGKTL+A+E I     ++     LFLVPT  LV QQA+ +   TGL VAE  GG +L     VLV+TP A+Q    +GA+V +  +F ++V DEVHH L  H Y  +A    +L K +  P+I+GLSAS TYAVGE
Sbjct:    2 ELRAYQARLLEEILASGNTLVVLPTGAGKTLIASELI-----RRLGPPCLFLVPTCLLVEQQAKAVRDWTGLQVAEFMGGMSLPAHFDVLVSTPKAFQMTQSKGAAVFQWDAFKLVVFDEVHHVLKDHPYRRLAL---SLSKLQLGPQILGLSASLTYAVGE 155          
BLAST of jgi.p|Trimin1|337642 vs. uniprot
Match: A0A812TEW1_9DINO (DCL2A protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812TEW1_9DINO)

HSP 1 Score: 125 bits (313), Expect = 8.040e-26
Identity = 80/162 (49.38%), Postives = 103/162 (63.58%), Query Frame = 0
Query:   27 ELRGYQERICMD-MAKGNHLVVLPTGAGKTLVAAECIAAELWKQPTKRALFLVPTRNLVHQQAQVIEGETGLDVAELKGGNALRIGCRVLVATPGAYQQ---QGASVLKLASFSVIVVDEVHHTLGKHLYNVIARELRALPKSEPRPRIVGLSASPTYAVGE 184
            ELR YQ R+  + +A GN LVVLPTGAGKTL+A+E I     ++     LFLVPT  LV QQA+ +   TGL VAE  GG +L     VLV+TP A+Q    +GA+V +  +F ++V DEVHH L  H Y  +A    +L K +  P+I+GLSAS TYAVGE
Sbjct:    2 ELRAYQARLLEEILASGNTLVVLPTGAGKTLIASELI-----RRLGPPCLFLVPTCLLVEQQAKAVRDWTGLQVAEFMGGMSLPAHFDVLVSTPKAFQMTQSKGAAVFQWDAFKLVVFDEVHHVLKDHPYRRLAL---SLSKLQLGPQILGLSASLTYAVGE 155          
BLAST of jgi.p|Trimin1|337642 vs. uniprot
Match: D7FR00_ECTSI (ATP-dependent RNA helicase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR00_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 2.980e-17
Identity = 45/93 (48.39%), Postives = 62/93 (66.67%), Query Frame = 0
Query:  609 RITTHILNHFVASDAELSALFRSACAYAAGTPAAAGLRMSSTDLRDRFTNFRLGHFNLIFATCVAEEGLDLPCANCVIRFDPMHTPVSYVQVR 701
            R+TTH+L H +A+D  ++  F +AC YA+ +P  A L +S  D  +    FR G  NL+ +TCVAEEG+D+P ANCV+R+DPM   VS VQ R
Sbjct:  322 RMTTHVLAHVIAADPRMAPRFSAACLYASSSPTTASLSLSERDTEENLEAFRSGSVNLLLSTCVAEEGIDVPDANCVVRYDPMDHAVSMVQGR 414          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|337642 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C8Q2_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KX57_9PHAE6.370e-4528.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A2V3IZ19_9FLOR1.030e-3625.74Endoribonuclease Dicer-like n=1 Tax=Gracilariopsis... [more]
A0A7S4V2U7_9DINO3.910e-3032.51Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A7S1FQB5_9STRA1.180e-2925.32Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A812IWI1_SYMPI3.830e-2932.26CFAP61 protein n=1 Tax=Symbiodinium pilosum TaxID=... [more]
A0A812RBN0_9DINO5.930e-2749.39DCL2A protein n=1 Tax=Symbiodinium natans TaxID=87... [more]
A0A1Q9EU77_SYMMI3.130e-2649.38Endoribonuclease Dicer-like 2a n=3 Tax=Symbiodiniu... [more]
A0A812TEW1_9DINO8.040e-2649.38DCL2A protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
D7FR00_ECTSI2.980e-1748.39ATP-dependent RNA helicase, putative n=1 Tax=Ectoc... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 335..355
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 545..566
NoneNo IPR availablePANTHERPTHR14074HELICASE WITH DEATH DOMAIN-RELATEDcoord: 609..701
coord: 22..181
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 24..207
e-value: 3.3E-25
score: 99.7
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 35..196
score: 19.07881
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 20..194
e-value: 3.2E-38
score: 133.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 607..701
e-value: 2.2E-13
score: 52.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 133..700
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 17..179
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 646..700
e-value: 2.2E-9
score: 37.6
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 604..702
score: 8.960336
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 32..179
e-value: 3.2E-17
score: 62.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_9contigContig_9:148631..154291 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|337642mRNA_3516Tribonema minus UTEX_B_3156 mRNAContig_9 148631..154291 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|337642|MIX46405_2_8 ID=Trimin1|337642|MIX46405_2_8|Name=jgi.p|Trimin1|337642|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=703bp
MYSEPKATAGAGNGSVRSKYQQHVKTELRGYQERICMDMAKGNHLVVLPT
GAGKTLVAAECIAAELWKQPTKRALFLVPTRNLVHQQAQVIEGETGLDVA
ELKGGNALRIGCRVLVATPGAYQQQGASVLKLASFSVIVVDEVHHTLGKH
LYNVIARELRALPKSEPRPRIVGLSASPTYAVGEQQDCGPQRVADVRGGR
TAGMYVRTIITYTYPGQMLKDCGAQRIADIRGGYGRIVGLSASPTYAVGE
RQVVAKLRNLCDVLSIDAVHSATSEELVASGYHAVPAAVIHHSDNVPLVL
EDVRKAARPNDPRADHELQDAFLRSIDSGSAHPLLLQLMEVAAALEAALA
RADADFVSPLRRAGPEAPPLAKVKEWGGIALRQAEGVHAATPGLRVGVGK
GIGDASAGLSTAGRLHNAYYEEYYGVPGAKRRAAAAAAAKTAEAAEAPEA
ESVETCHEPLYRALAHVCEAARVGVISSQVDVELSAAYVHMAWTTLGLAA
GRCGRCGRPCAPALSETLARLAEDCGALLQRDAGWAPSPKRKASASADVL
AGSSSPKRRASEAEGEAGKAAGERAFIVCPGTQTHCRRRHRCCRCCCHCC
PPPPPPQHRITTHILNHFVASDAELSALFRSACAYAAGTPAAAGLRMSST
DLRDRFTNFRLGHFNLIFATCVAEEGLDLPCANCVIRFDPMHTPVSYVQV
RM*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase
IPR001650Helicase_C
IPR011545DEAD/DEAH_box_helicase_dom