Trimin1|337552|MIX46315_37_28 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|337552
Unique NameTrimin1|337552|MIX46315_37_28
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length828
Homology
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BLAST of jgi.p|Trimin1|337552 vs. uniprot
Match: A0A836C7Q9_9STRA (SAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Q9_9STRA)

HSP 1 Score: 810 bits (2093), Expect = 6.950e-283
Identity = 827/827 (100.00%), Postives = 827/827 (100.00%), Query Frame = 0 
Query:    1 MRVAIATLALLLHLGTCGALVAPIATEAGARASCCSSCSYSAIRSGRRYRTVTSLLAKAKGEAPAASDEESASSSPATTEAAPAEFDVGTAAATGAAGAFLGWALARSVDLDIDLYGAVVGTVLGFYSTTLQGTAGSTSRAVGKVTRGAAEAAAKVVNDSKLGDKLLGAVGNELVDVLELTSAAVAKGVQASKPPETEVERQLAQTREKLXXXXXXXXXXXAAAEDAQRERSFMARRVKDAGLAPEALKAEGAQLEKLQSKVADMEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATLGQGKKAAAAAQKELAEAQAAAQACHHLKLLNVAAESDAAAAAEAAQAGARERIGGLESRLAAXXXXXXXXRRQAKEYEGKAAEAAAAQKTAGIGLMLCRRDGRHTSPLPPPPRSCEEFKQADISRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQRAQTELTFELHATXXXXXXXXXXXXXXXXXXXXXXXXXXXARKLAAAEARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCGQRCAAIVVFAALVTGLEAALDAAKKDAXXXXXXXXXXXXLPXXXXXXXXXXXXXXXXAAVPAKPXXXXXXXXXXXXXXAAATTAXXXXXXXXXXXXXXXTPPTPPKPAVQXXXXXXXXXXXXAPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAPKVPAVPGSVAARAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGGGDLTARTVKDLKDLCKAAGLPQTGKKAELIARLEGKRG 827
            MRVAIATLALLLHLGTCGALVAPIATEAGARASCCSSCSYSAIRSGRRYRTVTSLLAKAKGEAPAASDEESASSSPATTEAAPAEFDVGTAAATGAAGAFLGWALARSVDLDIDLYGAVVGTVLGFYSTTLQGTAGSTSRAVGKVTRGAAEAAAKVVNDSKLGDKLLGAVGNELVDVLELTSAAVAKGVQASKPPETEVERQLAQTREKLXXXXXXXXXXXAAAEDAQRERSFMARRVKDAGLAPEALKAEGAQLEKLQSKVADMEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATLGQGKKAAAAAQKELAEAQAAAQACHHLKLLNVAAESDAAAAAEAAQAGARERIGGLESRLAAXXXXXXXXRRQAKEYEGKAAEAAAAQKTAGIGLMLCRRDGRHTSPLPPPPRSCEEFKQADISRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQRAQTELTFELHATXXXXXXXXXXXXXXXXXXXXXXXXXXXARKLAAAEARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCGQRCAAIVVFAALVTGLEAALDAAKKDAXXXXXXXXXXXXLPXXXXXXXXXXXXXXXXAAVPAKPXXXXXXXXXXXXXXAAATTAXXXXXXXXXXXXXXXTPPTPPKPAVQXXXXXXXXXXXXAPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAPKVPAVPGSVAARAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGGGDLTARTVKDLKDLCKAAGLPQTGKKAELIARLEGKRG
Sbjct:    1 MRVAIATLALLLHLGTCGALVAPIATEAGARASCCSSCSYSAIRSGRRYRTVTSLLAKAKGEAPAASDEESASSSPATTEAAPAEFDVGTAAATGAAGAFLGWALARSVDLDIDLYGAVVGTVLGFYSTTLQGTAGSTSRAVGKVTRGAAEAAAKVVNDSKLGDKLLGAVGNELVDVLELTSAAVAKGVQASKPPETEVERQLAQTREKLXXXXXXXXXXXAAAEDAQRERSFMARRVKDAGLAPEALKAEGAQLEKLQSKVADMEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATLGQGKKAAAAAQKELAEAQAAAQACHHLKLLNVAAESDAAAAAEAAQAGARERIGGLESRLAAXXXXXXXXRRQAKEYEGKAAEAAAAQKTAGIGLMLCRRDGRHTSPLPPPPRSCEEFKQADISRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQRAQTELTFELHATXXXXXXXXXXXXXXXXXXXXXXXXXXXARKLAAAEARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCGQRCAAIVVFAALVTGLEAALDAAKKDAXXXXXXXXXXXXLPXXXXXXXXXXXXXXXXAAVPAKPXXXXXXXXXXXXXXAAATTAXXXXXXXXXXXXXXXTPPTPPKPAVQXXXXXXXXXXXXAPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAPKVPAVPGSVAARAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGGGDLTARTVKDLKDLCKAAGLPQTGKKAELIARLEGKRG 827
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|337552 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836C7Q9_9STRA6.950e-283100.00SAP domain-containing protein n=1 Tax=Tribonema mi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 450..473
NoneNo IPR availableCOILSCoilCoilcoord: 196..237
NoneNo IPR availableCOILSCoilCoilcoord: 484..525
NoneNo IPR availableCOILSCoilCoilcoord: 248..307
NoneNo IPR availableCOILSCoilCoilcoord: 365..399
NoneNo IPR availableCOILSCoilCoilcoord: 312..332
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 516..553
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 648..668
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 600..773
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 606..629
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 705..730
IPR003034SAP domainSMARTSM00513sap_9coord: 792..826
e-value: 0.0025
score: 27.0
IPR003034SAP domainPFAMPF02037SAPcoord: 794..823
e-value: 1.1E-10
score: 41.0
IPR003034SAP domainPROSITEPS50800SAPcoord: 792..826
score: 10.865029
IPR036361SAP domain superfamilyGENE3D1.10.720.30SAP domaincoord: 788..825
e-value: 6.6E-11
score: 43.7
IPR036361SAP domain superfamilySUPERFAMILY68906SAP domaincoord: 787..823

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_89contigContig_89:468564..475913 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|337552mRNA_12825Tribonema minus UTEX_B_3156 mRNAContig_89 468162..475973 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|337552|MIX46315_37_28 ID=Trimin1|337552|MIX46315_37_28|Name=jgi.p|Trimin1|337552|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=828bp
MRVAIATLALLLHLGTCGALVAPIATEAGARASCCSSCSYSAIRSGRRYR
TVTSLLAKAKGEAPAASDEESASSSPATTEAAPAEFDVGTAAATGAAGAF
LGWALARSVDLDIDLYGAVVGTVLGFYSTTLQGTAGSTSRAVGKVTRGAA
EAAAKVVNDSKLGDKLLGAVGNELVDVLELTSAAVAKGVQASKPPETEVE
RQLAQTREKLAEARAELKAARAAAEDAQRERSFMARRVKDAGLAPEALKA
EGAQLEKLQSKVADMEAQLKSAKADAAAAEARFKSEIAAANEEAKRLSAE
LAAVNSDARATLGQGKKAAAAAQKELAEAQAAAQACHHLKLLNVAAESDA
AAAAEAAQAGARERIGGLESRLAAAAAEAAAARRQAKEYEGKAAEAAAAQ
KTAGIGLMLCRRDGRHTSPLPPPPRSCEEFKQADISRRRRRPPRPAAARA
KTLEEELKAAQSAAAAAQRAQTELTFELHATARAKTLEKELKAAQSAAAA
AQREQTELARKLAAAEARAAAARRRATPAARTPPRRWQRSGRSSTPPSRM
RRRRCGQRCAAIVVFAALVTGLEAALDAAKKDAAASKSAAAAPPSLPAAA
AAKPAPAAQQPPPAAVPAKPAPPAQPAAAAPKPAAAATTAQQDPPAGAAA
KPAPPTPPTPPKPAVQPAAAAKPAPAAAAPVAAAKPAPPQQPAAAPPAAA
ASAAKSFSGGTSGVKMPSLQVPQGSAAAAPPQSASAPKVPAVPGSVAARA
PAPPGAPAAGGSTAAAAAAAKPAAGAAAAASKPAAAVGGGDLTARTVKDL
KDLCKAAGLPQTGKKAELIARLEGKRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003034SAP_dom
IPR036361SAP_dom_sf