Trimin1|337543|MIX46306_5_36 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|337543
Unique NameTrimin1|337543|MIX46306_5_36
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length438
Homology
BLAST of jgi.p|Trimin1|337543 vs. uniprot
Match: A0A835YJK9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJK9_9STRA)

HSP 1 Score: 655 bits (1689), Expect = 6.450e-234
Identity = 437/437 (100.00%), Postives = 437/437 (100.00%), Query Frame = 0
Query:    1 MQGSPTSSRDVENVINESSPGAVVLELCESRFKALSRELAAEQSVKEETEVERIHAVLGGWVRGLKSTQQKKGLLQALTAGLVSSGYLWQKLNNFDPGCEFKTAMALSNARGIDIVLGDRDINETLGRLNGKNKQGKRAPKLQPNAPPPPPLLKAKKRWSVDRSLAYVRGLGRDARVLRLAVAGESGQQWPAALNVPRCIFWRGDVLKDLFGLLAPLTAGIYVMAGAFEMGVGGAIAAAHAISGDASEAXXXXXXXXXXXXXXXXXVAPWLLEEAGNVTVVAVASLVMLRFFRLVIHERDVYLARAIQQWSVAGYKCALAIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVRVCDTCMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEAARAHPGEPVVAVLGLLHCNGVAQLLRSGRDLTNM 437
            MQGSPTSSRDVENVINESSPGAVVLELCESRFKALSRELAAEQSVKEETEVERIHAVLGGWVRGLKSTQQKKGLLQALTAGLVSSGYLWQKLNNFDPGCEFKTAMALSNARGIDIVLGDRDINETLGRLNGKNKQGKRAPKLQPNAPPPPPLLKAKKRWSVDRSLAYVRGLGRDARVLRLAVAGESGQQWPAALNVPRCIFWRGDVLKDLFGLLAPLTAGIYVMAGAFEMGVGGAIAAAHAISGDASEAXXXXXXXXXXXXXXXXXVAPWLLEEAGNVTVVAVASLVMLRFFRLVIHERDVYLARAIQQWSVAGYKCALAIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVRVCDTCMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEAARAHPGEPVVAVLGLLHCNGVAQLLRSGRDLTNM
Sbjct:    1 MQGSPTSSRDVENVINESSPGAVVLELCESRFKALSRELAAEQSVKEETEVERIHAVLGGWVRGLKSTQQKKGLLQALTAGLVSSGYLWQKLNNFDPGCEFKTAMALSNARGIDIVLGDRDINETLGRLNGKNKQGKRAPKLQPNAPPPPPLLKAKKRWSVDRSLAYVRGLGRDARVLRLAVAGESGQQWPAALNVPRCIFWRGDVLKDLFGLLAPLTAGIYVMAGAFEMGVGGAIAAAHAISGDASEAXXXXXXXXXXXXXXXXXVAPWLLEEAGNVTVVAVASLVMLRFFRLVIHERDVYLARAIQQWSVAGYKCALAIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVRVCDTCMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEAARAHPGEPVVAVLGLLHCNGVAQLLRSGRDLTNM 437          
BLAST of jgi.p|Trimin1|337543 vs. uniprot
Match: D7FIC1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIC1_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 1.840e-31
Identity = 155/492 (31.50%), Postives = 203/492 (41.26%), Query Frame = 0
Query:    1 MQGSPTSSRDVENVINESSPGAVVLELCESRFKALSRELAAEQSVKEETEVE---RIHAVLGGWVRGLKSTQQKKGLLQALTAGLVSSGYLWQKLNNFDPGCEFKTAMALSN-----------ARGI--------------DIVLGDRDINETLGRLNGK------------NKQGKRAPKLQPNAPPPPPLLKAKKRWSVDRSLAYVRG------LGRDARVLRLAVAGESGQQWPAALNVPRCIFWRGDVLKDLFGLLAPLTAGIYVMAGAFEMGVGGAIAAAHAISGDASEAXXXXXXXXXXXXXXXXXVAPW-------------LLEEAGNV--TVVAVASL-VMLRFFRLVIHERDVYLARAIQQWSVAGYKCALAIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVRVCDTCMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEAARAHPGEPVVAVLGLLHCNGVAQLLRS 430
            + GS  S RDV++V+ +  PGAVVLELCESR KAL R+L  E+  K +  +E   R  +    W +G+K T  K GL+Q + +GL+S+ Y+ Q+L +FDPG EFKTAM  ++           ARG+               +VLGDRD+ ETL RL G              K G                       ++D +            L  DAR++R+AV G SG+QWP +LNV   + WR    + L  LL PL   + V++   +  +GG   A  A SG    A      XXXXXXXXXXX                 LLE   +V  T++ V S+  MLRFFRLVI ERD  LA  + +                                                                                             A R HPG PVVAVLGLLHCNGVA ++RS
Sbjct:  124 LHGSHASGRDVQDVLEKVRPGAVVLELCESRHKALRRDL--EKRAKGDAPLEGKERWASAFSSWAKGVKKTSAKSGLVQGILSGLLSAPYVVQRLGDFDPGLEFKTAMVYADPSVRPGYSTGVARGMVSPAAGGGAGPGECSVVLGDRDVQETLRRLGGALTALTGRGEGGDEKHGVGXXXXXXXXXXXXXXGGGVSVGTLDAAETEATSGWNWGTLASDARIVRVAVVGPSGRQWPDSLNVLDTV-WRER--QALGMLLLPLLLPMMVVSETLQRSIGGVATATVAASGSGGGALRGFGAXXXXXXXXXXXXXXVGGGVAAVDVDLGRLLEGTSDVLDTLLVVLSVWYMLRFFRLVIKERDDVLADNVMK---------------------------------------------------------------------------------------------ACRDHPGRPVVAVLGLLHCNGVADIIRS 517          
BLAST of jgi.p|Trimin1|337543 vs. uniprot
Match: A0A7S0WU28_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WU28_9CHLO)

HSP 1 Score: 80.5 bits (197), Expect = 7.900e-13
Identity = 49/134 (36.57%), Postives = 81/134 (60.45%), Query Frame = 0
Query:    1 MQGSPTSSRDVENVINESSPGAVVLELCESRFKALSRELAA-EQSVKEETEVERIHAVLGGWVRGLKSTQQKKGLLQALTAGLVSSGYLWQKL-NNFDPGCEFKTAMALSN---ARGIDIVLGDRDINETLGRL 129
            + GSP S+ DV  +I+++ P AVVLELC+ RFK++ + L   E+++   ++      +L  W RG++    K+GL  A+ A L+SS YL Q++ + F+PG EFK+A+  S        ++V GD D+  T+ +L
Sbjct:   91 LHGSPLSALDVATIIHQTQPSAVVLELCDKRFKSIKKALVEQEENITLGSDRTPEDTILK-WRRGVRKAYIKRGLRHAIGAALISSLYLVQEVVSGFEPGTEFKSAIVASERMCGSTPELVNGDDDVTVTIRKL 223          
BLAST of jgi.p|Trimin1|337543 vs. uniprot
Match: A0A813EVF4_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EVF4_POLGL)

HSP 1 Score: 58.9 bits (141), Expect = 1.710e-6
Identity = 41/126 (32.54%), Postives = 60/126 (47.62%), Query Frame = 0
Query:    4 SPTSSRDVENVINESSPGAVVLELCESRFKALSRELAAEQSVKEETEVERIHAVLGGWVRGLKSTQQKKGLLQALTAGLVSSGYLWQKLNNFDPGCEFKTAMALSNARGIDIVLGDRDINETLGRL 129
            S  S+++V  V   + P  + +ELC  R +A+  +L  E        +E     L G   G    +   GLL+A  A L        K+    PG EF+ A+ ++N RG+ IV GDRDI ET  +L
Sbjct:   79 SEVSAKEVRQVAESAKPDMIFVELCSKRLEAVKEDL--EHPATPPNMLEVFQEALEG--NGPLLDRLLGGLLKAQQAALA-------KIFGLQPGGEFRAALEIANDRGLPIVCGDRDIEETTSKL 193          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|337543 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835YJK9_9STRA6.450e-234100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FIC1_ECTSI1.840e-3131.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S0WU28_9CHLO7.900e-1336.57Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A813EVF4_POLGL1.710e-632.54Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 32..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..150
NoneNo IPR availablePANTHERPTHR21530:SF0TRAB DOMAIN-CONTAINING PROTEINcoord: 4..132
NoneNo IPR availablePANTHERPTHR21530:SF0TRAB DOMAIN-CONTAINING PROTEINcoord: 388..430
IPR046345TraB/PryY-likePANTHERPTHR21530PHEROMONE SHUTDOWN PROTEINcoord: 388..430
IPR046345TraB/PryY-likePANTHERPTHR21530PHEROMONE SHUTDOWN PROTEINcoord: 4..132
IPR046345TraB/PryY-likeCDDcd14726TraB_PrgY-likecoord: 4..129
e-value: 3.60565E-18
score: 79.9241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_89contigContig_89:420714..428400 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|337543mRNA_12822Tribonema minus UTEX_B_3156 mRNAContig_89 420714..428400 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|337543|MIX46306_5_36 ID=Trimin1|337543|MIX46306_5_36|Name=jgi.p|Trimin1|337543|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=438bp
MQGSPTSSRDVENVINESSPGAVVLELCESRFKALSRELAAEQSVKEETE
VERIHAVLGGWVRGLKSTQQKKGLLQALTAGLVSSGYLWQKLNNFDPGCE
FKTAMALSNARGIDIVLGDRDINETLGRLNGKNKQGKRAPKLQPNAPPPP
PLLKAKKRWSVDRSLAYVRGLGRDARVLRLAVAGESGQQWPAALNVPRCI
FWRGDVLKDLFGLLAPLTAGIYVMAGAFEMGVGGAIAAAHAISGDASEAA
AAAAADAAAAAGGAGGVAPWLLEEAGNVTVVAVASLVMLRFFRLVIHERD
VYLARAIQQWSVAGYKCALAIAVVVAVASLVMLCFFRLVIHKRDVYLARA
VQVRVCDTCMVAGYKCALAFAVVVAVSLLVMLRSFCLVVHERDVYLARAI
QEAARAHPGEPVVAVLGLLHCNGVAQLLRSGRDLTNM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR046345TraB_PrgY-like