Trimin1|337165|MIX45928_4_14 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|337165
Unique NameTrimin1|337165|MIX45928_4_14
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length919
Homology
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BLAST of jgi.p|Trimin1|337165 vs. uniprot
Match: A0A836C8C7_9STRA (B box-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8C7_9STRA)

HSP 1 Score: 1568 bits (4059), Expect = 0.000e+0
Identity = 918/918 (100.00%), Postives = 918/918 (100.00%), Query Frame = 0 
Query:    1 MLICEECERACGAPATLXXXXXXXXYARVACEACRQVVCARCATLVHLPGTAGADHPHVRSAQLRRLQPRDTSCVAAFAERCRSRGARDDYVPEGTARRDHLMPHVTEEDLLRAGVDLSQPTPLEAPTLAAVAGSSMTAPPNFKLKFKPGDLVLFRADAADACPDFSAMPRDSSNDFCSGDGDHCISGTDASGXXXXXXXXXXXXXXXXXXXXXXXGSRASLPRAPAPPPGRSDQRASAAGTXXXXXXXXXXXXXXXXXXXXXNXXXXSTYASSAARAELYGVVLAQPLRWHGQWELPERRGGADGGGQFHRVQVVGAATPGLRELERVQQWLWQLQQLQQAGDVAAPQRRGTMESVIVLGARGAAPLAKGRHSERXXXXXXXXXXXXXXXRRAAAARDARVRAARALCAPPPPEPLLLGLPQQTSGEGGDGETRLRLXXXXXXXXXXXXXXXLVVQVVVVAEHELLAPLAERDRRDAQRIRALKRLLLRVSEQERAAGLARGAAMWRAVVVTIIAQERRQASIRMQAVWRGYLARRRALALRWMKLQAEEEAAPPHKGPQFHFATRGQGGITTNGRTFFSTHKELRAYEDAIAHAFVRLFKLLASSIRLRLRRSFSHWHGLALSGAPVGQFRGFDPTTDPSLADAPALVRLTRGLRGPCEAAAWAVPGLVLMGGYPDGAARAFPSHFVRPRTDDTADAIGAPDTAATAILLSGVGLLLSVATEAEGAAFERARGLQPMQRVFQDALQMVTAHVRGKLSEEMHALRTVQQERQSMAVLHQVSGGGSSGLRSDGELDAIAREKAAREGVRCCQAALERLPKKVRVVYAVGACGTAEAPTSSGLISACAAVEVALREGERVYVWSIGGRRCIDEVAASDQLSAAESLVAAMVAGGLMLAVALSSTGFNKEFRYYHDPLGH 918
            MLICEECERACGAPATLXXXXXXXXYARVACEACRQVVCARCATLVHLPGTAGADHPHVRSAQLRRLQPRDTSCVAAFAERCRSRGARDDYVPEGTARRDHLMPHVTEEDLLRAGVDLSQPTPLEAPTLAAVAGSSMTAPPNFKLKFKPGDLVLFRADAADACPDFSAMPRDSSNDFCSGDGDHCISGTDASGXXXXXXXXXXXXXXXXXXXXXXXGSRASLPRAPAPPPGRSDQRASAAGTXXXXXXXXXXXXXXXXXXXXXNXXXXSTYASSAARAELYGVVLAQPLRWHGQWELPERRGGADGGGQFHRVQVVGAATPGLRELERVQQWLWQLQQLQQAGDVAAPQRRGTMESVIVLGARGAAPLAKGRHSERXXXXXXXXXXXXXXXRRAAAARDARVRAARALCAPPPPEPLLLGLPQQTSGEGGDGETRLRLXXXXXXXXXXXXXXXLVVQVVVVAEHELLAPLAERDRRDAQRIRALKRLLLRVSEQERAAGLARGAAMWRAVVVTIIAQERRQASIRMQAVWRGYLARRRALALRWMKLQAEEEAAPPHKGPQFHFATRGQGGITTNGRTFFSTHKELRAYEDAIAHAFVRLFKLLASSIRLRLRRSFSHWHGLALSGAPVGQFRGFDPTTDPSLADAPALVRLTRGLRGPCEAAAWAVPGLVLMGGYPDGAARAFPSHFVRPRTDDTADAIGAPDTAATAILLSGVGLLLSVATEAEGAAFERARGLQPMQRVFQDALQMVTAHVRGKLSEEMHALRTVQQERQSMAVLHQVSGGGSSGLRSDGELDAIAREKAAREGVRCCQAALERLPKKVRVVYAVGACGTAEAPTSSGLISACAAVEVALREGERVYVWSIGGRRCIDEVAASDQLSAAESLVAAMVAGGLMLAVALSSTGFNKEFRYYHDPLGH
Sbjct:    1 MLICEECERACGAPATLXXXXXXXXYARVACEACRQVVCARCATLVHLPGTAGADHPHVRSAQLRRLQPRDTSCVAAFAERCRSRGARDDYVPEGTARRDHLMPHVTEEDLLRAGVDLSQPTPLEAPTLAAVAGSSMTAPPNFKLKFKPGDLVLFRADAADACPDFSAMPRDSSNDFCSGDGDHCISGTDASGXXXXXXXXXXXXXXXXXXXXXXXGSRASLPRAPAPPPGRSDQRASAAGTXXXXXXXXXXXXXXXXXXXXXNXXXXSTYASSAARAELYGVVLAQPLRWHGQWELPERRGGADGGGQFHRVQVVGAATPGLRELERVQQWLWQLQQLQQAGDVAAPQRRGTMESVIVLGARGAAPLAKGRHSERXXXXXXXXXXXXXXXRRAAAARDARVRAARALCAPPPPEPLLLGLPQQTSGEGGDGETRLRLXXXXXXXXXXXXXXXLVVQVVVVAEHELLAPLAERDRRDAQRIRALKRLLLRVSEQERAAGLARGAAMWRAVVVTIIAQERRQASIRMQAVWRGYLARRRALALRWMKLQAEEEAAPPHKGPQFHFATRGQGGITTNGRTFFSTHKELRAYEDAIAHAFVRLFKLLASSIRLRLRRSFSHWHGLALSGAPVGQFRGFDPTTDPSLADAPALVRLTRGLRGPCEAAAWAVPGLVLMGGYPDGAARAFPSHFVRPRTDDTADAIGAPDTAATAILLSGVGLLLSVATEAEGAAFERARGLQPMQRVFQDALQMVTAHVRGKLSEEMHALRTVQQERQSMAVLHQVSGGGSSGLRSDGELDAIAREKAAREGVRCCQAALERLPKKVRVVYAVGACGTAEAPTSSGLISACAAVEVALREGERVYVWSIGGRRCIDEVAASDQLSAAESLVAAMVAGGLMLAVALSSTGFNKEFRYYHDPLGH 918
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|337165 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836C8C7_9STRA0.000e+0100.00B box-type domain-containing protein n=1 Tax=Tribo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000048IQ motif, EF-hand binding sitePFAMPF00612IQcoord: 520..538
e-value: 6.1E-4
score: 19.4
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 519..548
score: 9.2488
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..215
NoneNo IPR availableCDDcd19757Bbox1coord: 18..56
e-value: 2.85315E-5
score: 40.1719
IPR000315B-box-type zinc fingerPROSITEPS50119ZF_BBOXcoord: 14..61
score: 9.456329

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_87contigContig_87:446825..471819 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|337165mRNA_14775Tribonema minus UTEX_B_3156 mRNAContig_87 446825..471819 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|337165|MIX45928_4_14 ID=Trimin1|337165|MIX45928_4_14|Name=jgi.p|Trimin1|337165|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=919bp
MLICEECERACGAPATLICEECERAYARVACEACRQVVCARCATLVHLPG
TAGADHPHVRSAQLRRLQPRDTSCVAAFAERCRSRGARDDYVPEGTARRD
HLMPHVTEEDLLRAGVDLSQPTPLEAPTLAAVAGSSMTAPPNFKLKFKPG
DLVLFRADAADACPDFSAMPRDSSNDFCSGDGDHCISGTDASGNGGSGSG
GSSGGCSSGSGGAAETGSRASLPRAPAPPPGRSDQRASAAGTAAAAADAA
AAAAAAAAAAAACNAGAASTYASSAARAELYGVVLAQPLRWHGQWELPER
RGGADGGGQFHRVQVVGAATPGLRELERVQQWLWQLQQLQQAGDVAAPQR
RGTMESVIVLGARGAAPLAKGRHSERVIVLGARGAAPLVKERRAAAARDA
RVRAARALCAPPPPEPLLLGLPQQTSGEGGDGETRLRLLLGQPQQTGVDG
GDGLVVQVVVVAEHELLAPLAERDRRDAQRIRALKRLLLRVSEQERAAGL
ARGAAMWRAVVVTIIAQERRQASIRMQAVWRGYLARRRALALRWMKLQAE
EEAAPPHKGPQFHFATRGQGGITTNGRTFFSTHKELRAYEDAIAHAFVRL
FKLLASSIRLRLRRSFSHWHGLALSGAPVGQFRGFDPTTDPSLADAPALV
RLTRGLRGPCEAAAWAVPGLVLMGGYPDGAARAFPSHFVRPRTDDTADAI
GAPDTAATAILLSGVGLLLSVATEAEGAAFERARGLQPMQRVFQDALQMV
TAHVRGKLSEEMHALRTVQQERQSMAVLHQVSGGGSSGLRSDGELDAIAR
EKAAREGVRCCQAALERLPKKVRVVYAVGACGTAEAPTSSGLISACAAVE
VALREGERVYVWSIGGRRCIDEVAASDQLSAAESLVAAMVAGGLMLAVAL
SSTGFNKEFRYYHDPLGH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS
IPR000315Znf_B-box