Trimin1|337150|MIX45913_8_6 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|337150
Unique Name	Trimin1\|337150\|MIX45913_8_6
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	1626

Homology

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BLAST of jgi.p|Trimin1|337150 vs. uniprot
Match: A0A836C8M4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8M4_9STRA)

HSP 1 Score: 2494 bits (6464), Expect = 0.000e+0
Identity = 1625/1625 (100.00%), Postives = 1625/1625 (100.00%), Query Frame = 0

Query:    1 MGRVAAAALRQGCRSLKPPRAGVPTCTDLVPAISTARTGTRSLSSGTSQPAEYTSQRXXXXXXXXXRSRVGSAIHSRHVLHHNYLPCQVCGGLYGATRGPARAASSLRENDDAADWHFQHFVPETDWQEKPLAAAQAQGGGADGGQEQLSKHADDQLDEAHSLAARADEQRVLALVPDALERIAKLLASRQQLQEAVAELESLCPQLPRRLPGSVKGPLLNRHTNDRLDARMPPQPGMRTPFCQNGMTYSDTKAAISQQGCRQKAHGAALRMCERDGLWRAAAALVRAPVTPDGRPTERALALAARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVRAMNGPLRGAFDFLRDGDGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAHDSEVDGQLHGGRASWDVGGHLSEAIVWDVDRAPRAERRLLLAFLRVLWEPARNHWQVGAAAXXXXXXXXXXXXEVRGAETAGSPADQPTAAXXXXXXXXDGSDAEQRMPEATVAMVRDALTACHHAGAFEAAFALLADASRAHARSSXXXXXXXXXXXXXXXXXAAAVAGDARCHNAALCACAQAGAWGPALSLLGAMGAAPLALAQQIAALERAPLRLPWAQGAAAAEGSMATHPRGRAAAAARARSGISKSDWTARRAREAAERSSVSALSPEVMGKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPHAEPWRMEGRAAPPPPPDAGTYSAVMAALTRAKLWRGALRLLQELRSGRCGGAAATKETYEAVLEACAANGRATEAVALLKRMRADSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEMLCADAESHLLVARAAAAAAAWAAAEGLLAAALRAPRADVTTLEAALRVLTVGDGAGRTRVGAAVRLLEAARRIEDEGGAAAPQLLTARAVNVVLNMCAEARDWRRAIALLQAITKGSGSGALRVRADTRTFNAVLKALAAAGAKPFEESAFICGRSTPKTLLKCVARQVNVSPQAMRKTPVLLQSRQQRVQHSPRLAAYELSPSSELHTCSTEREKAMELSDAMPRLGVRRDRDTYTALLHAIRMSDGGTWEEARELLTGLRGTGRRVSGSALNAAARAIAKESPAHARAVARAMRRRDFPILPSTFTAVAPRRSGSGAAVFDDYRALMKREPEVDEEVEEVLGRGGRKWLNLKKSDKLRTIQCLADHSCEQPRCALCTLCTQPSSLKPPIEFYISGMRIAGDSDWDSVLEVAEDVEDRGFSNSEEMILHLVMQCGYFNRPAVALQLLERARARGRLNAPVLNAVLWTLARTGKWEDALELVWISSXXXXXXXXXXXXXXXXXXXXXXXXXXXVRRLHKDPKHWGILPDLSSVALALRACADAGRWQEALKFIDDMHNQGVSIDERCLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEKRVRRYHGRSLRLHCASHCCAVAEAGGSVIASHANAAGLNGQPLPPKRLSKRRLRLPTKKAESAKKRVTSWGKKRSTTRSSCCVRSATRASYARLQTCLARDSIMYCVVQIIAPSSIILSGMPFCAMSLRHVKALPNDDSEEQYAAQSAGCASSTLSFGGSRRS 1625
            MGRVAAAALRQGCRSLKPPRAGVPTCTDLVPAISTARTGTRSLSSGTSQPAEYTSQRXXXXXXXXXRSRVGSAIHSRHVLHHNYLPCQVCGGLYGATRGPARAASSLRENDDAADWHFQHFVPETDWQEKPLAAAQAQGGGADGGQEQLSKHADDQLDEAHSLAARADEQRVLALVPDALERIAKLLASRQQLQEAVAELESLCPQLPRRLPGSVKGPLLNRHTNDRLDARMPPQPGMRTPFCQNGMTYSDTKAAISQQGCRQKAHGAALRMCERDGLWRAAAALVRAPVTPDGRPTERALALAARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVRAMNGPLRGAFDFLRDGDGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAHDSEVDGQLHGGRASWDVGGHLSEAIVWDVDRAPRAERRLLLAFLRVLWEPARNHWQVGAAAXXXXXXXXXXXXEVRGAETAGSPADQPTAAXXXXXXXXDGSDAEQRMPEATVAMVRDALTACHHAGAFEAAFALLADASRAHARSSXXXXXXXXXXXXXXXXXAAAVAGDARCHNAALCACAQAGAWGPALSLLGAMGAAPLALAQQIAALERAPLRLPWAQGAAAAEGSMATHPRGRAAAAARARSGISKSDWTARRAREAAERSSVSALSPEVMGKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPHAEPWRMEGRAAPPPPPDAGTYSAVMAALTRAKLWRGALRLLQELRSGRCGGAAATKETYEAVLEACAANGRATEAVALLKRMRADSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEMLCADAESHLLVARAAAAAAAWAAAEGLLAAALRAPRADVTTLEAALRVLTVGDGAGRTRVGAAVRLLEAARRIEDEGGAAAPQLLTARAVNVVLNMCAEARDWRRAIALLQAITKGSGSGALRVRADTRTFNAVLKALAAAGAKPFEESAFICGRSTPKTLLKCVARQVNVSPQAMRKTPVLLQSRQQRVQHSPRLAAYELSPSSELHTCSTEREKAMELSDAMPRLGVRRDRDTYTALLHAIRMSDGGTWEEARELLTGLRGTGRRVSGSALNAAARAIAKESPAHARAVARAMRRRDFPILPSTFTAVAPRRSGSGAAVFDDYRALMKREPEVDEEVEEVLGRGGRKWLNLKKSDKLRTIQCLADHSCEQPRCALCTLCTQPSSLKPPIEFYISGMRIAGDSDWDSVLEVAEDVEDRGFSNSEEMILHLVMQCGYFNRPAVALQLLERARARGRLNAPVLNAVLWTLARTGKWEDALELVWISSXXXXXXXXXXXXXXXXXXXXXXXXXXXVRRLHKDPKHWGILPDLSSVALALRACADAGRWQEALKFIDDMHNQGVSIDERCLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEKRVRRYHGRSLRLHCASHCCAVAEAGGSVIASHANAAGLNGQPLPPKRLSKRRLRLPTKKAESAKKRVTSWGKKRSTTRSSCCVRSATRASYARLQTCLARDSIMYCVVQIIAPSSIILSGMPFCAMSLRHVKALPNDDSEEQYAAQSAGCASSTLSFGGSRRS
Sbjct:    1 MGRVAAAALRQGCRSLKPPRAGVPTCTDLVPAISTARTGTRSLSSGTSQPAEYTSQRXXXXXXXXXRSRVGSAIHSRHVLHHNYLPCQVCGGLYGATRGPARAASSLRENDDAADWHFQHFVPETDWQEKPLAAAQAQGGGADGGQEQLSKHADDQLDEAHSLAARADEQRVLALVPDALERIAKLLASRQQLQEAVAELESLCPQLPRRLPGSVKGPLLNRHTNDRLDARMPPQPGMRTPFCQNGMTYSDTKAAISQQGCRQKAHGAALRMCERDGLWRAAAALVRAPVTPDGRPTERALALAARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVRAMNGPLRGAFDFLRDGDGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAHDSEVDGQLHGGRASWDVGGHLSEAIVWDVDRAPRAERRLLLAFLRVLWEPARNHWQVGAAAXXXXXXXXXXXXEVRGAETAGSPADQPTAAXXXXXXXXDGSDAEQRMPEATVAMVRDALTACHHAGAFEAAFALLADASRAHARSSXXXXXXXXXXXXXXXXXAAAVAGDARCHNAALCACAQAGAWGPALSLLGAMGAAPLALAQQIAALERAPLRLPWAQGAAAAEGSMATHPRGRAAAAARARSGISKSDWTARRAREAAERSSVSALSPEVMGKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPHAEPWRMEGRAAPPPPPDAGTYSAVMAALTRAKLWRGALRLLQELRSGRCGGAAATKETYEAVLEACAANGRATEAVALLKRMRADSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEMLCADAESHLLVARAAAAAAAWAAAEGLLAAALRAPRADVTTLEAALRVLTVGDGAGRTRVGAAVRLLEAARRIEDEGGAAAPQLLTARAVNVVLNMCAEARDWRRAIALLQAITKGSGSGALRVRADTRTFNAVLKALAAAGAKPFEESAFICGRSTPKTLLKCVARQVNVSPQAMRKTPVLLQSRQQRVQHSPRLAAYELSPSSELHTCSTEREKAMELSDAMPRLGVRRDRDTYTALLHAIRMSDGGTWEEARELLTGLRGTGRRVSGSALNAAARAIAKESPAHARAVARAMRRRDFPILPSTFTAVAPRRSGSGAAVFDDYRALMKREPEVDEEVEEVLGRGGRKWLNLKKSDKLRTIQCLADHSCEQPRCALCTLCTQPSSLKPPIEFYISGMRIAGDSDWDSVLEVAEDVEDRGFSNSEEMILHLVMQCGYFNRPAVALQLLERARARGRLNAPVLNAVLWTLARTGKWEDALELVWISSXXXXXXXXXXXXXXXXXXXXXXXXXXXVRRLHKDPKHWGILPDLSSVALALRACADAGRWQEALKFIDDMHNQGVSIDERCLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEKRVRRYHGRSLRLHCASHCCAVAEAGGSVIASHANAAGLNGQPLPPKRLSKRRLRLPTKKAESAKKRVTSWGKKRSTTRSSCCVRSATRASYARLQTCLARDSIMYCVVQIIAPSSIILSGMPFCAMSLRHVKALPNDDSEEQYAAQSAGCASSTLSFGGSRRS 1625

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|337150 vs. uniprot

BLAST of jgi.p|Trimin1|337150 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836C8M4_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 183..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 474..518
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 375..419
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..163
None	No IPR available	PANTHER	PTHR47942	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 56..1174 coord: 1255..1460
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 935..1232 e-value: 9.6E-14 score: 53.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 732..873 e-value: 1.0E-19 score: 73.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1366..1491 e-value: 2.4E-15 score: 58.7 coord: 1233..1365 e-value: 4.0E-12 score: 48.1
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 785..832 e-value: 0.0059 score: 16.7
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 747..773 e-value: 0.2 score: 12.0 coord: 1340..1365 e-value: 0.24 score: 11.8 coord: 1383..1407 e-value: 0.2 score: 12.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 1383..1411 e-value: 2.5E-4 score: 19.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 1375..1409 score: 9.371969

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_87	contig	Contig_87:368304..388961 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|337150	mRNA_14770	Tribonema minus UTEX_B_3156	mRNA	Contig_87 368304..388961 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|337150|MIX45913_8_6 ID=Trimin1|337150|MIX45913_8_6|Name=jgi.p|Trimin1|337150|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1626bp
MGRVAAAALRQGCRSLKPPRAGVPTCTDLVPAISTARTGTRSLSSGTSQP
AEYTSQRQQHEQQQQQRSRVGSAIHSRHVLHHNYLPCQVCGGLYGATRGP
ARAASSLRENDDAADWHFQHFVPETDWQEKPLAAAQAQGGGADGGQEQLS
KHADDQLDEAHSLAARADEQRVLALVPDALERIAKLLASRQQLQEAVAEL
ESLCPQLPRRLPGSVKGPLLNRHTNDRLDARMPPQPGMRTPFCQNGMTYS
DTKAAISQQGCRQKAHGAALRMCERDGLWRAAAALVRAPVTPDGRPTERA
LALAARAAAAAGAWRGAAAVLAACTSAGAAPPSDACHAALEAMAARARWR
EAVATVRAMNGPLRGAFDFLRDGDGGGGDGNGGDGGGGGGGGSGGGSGGG
GGGGGSAHDSEVDGQLHGGRASWDVGGHLSEAIVWDVDRAPRAERRLLLA
FLRVLWEPARNHWQVGAAAASSDSSGSSSSSEVRGAETAGSPADQPTAAA
AAAAGSGDGSDAEQRMPEATVAMVRDALTACHHAGAFEAAFALLADASRA
HARSSSGGGGGGGRGAFTSKKAAAAVAGDARCHNAALCACAQAGAWGPAL
SLLGAMGAAPLALAQQIAALERAPLRLPWAQGAAAAEGSMATHPRGRAAA
AARARSGISKSDWTARRAREAAERSSVSALSPEVMGKAAAAAAGAAVAAP
ARTRARAGSAAAAAAASAAAAAAAAPHAEPWRMEGRAAPPPPPDAGTYSA
VMAALTRAKLWRGALRLLQELRSGRCGGAAATKETYEAVLEACAANGRAT
EAVALLKRMRADSGGLAPSVPAYNAALRACAGAGQIARARAVLDEMLCAD
AESHLLVARAAAAAAAWAAAEGLLAAALRAPRADVTTLEAALRVLTVGDG
AGRTRVGAAVRLLEAARRIEDEGGAAAPQLLTARAVNVVLNMCAEARDWR
RAIALLQAITKGSGSGALRVRADTRTFNAVLKALAAAGAKPFEESAFICG
RSTPKTLLKCVARQVNVSPQAMRKTPVLLQSRQQRVQHSPRLAAYELSPS
SELHTCSTEREKAMELSDAMPRLGVRRDRDTYTALLHAIRMSDGGTWEEA
RELLTGLRGTGRRVSGSALNAAARAIAKESPAHARAVARAMRRRDFPILP
STFTAVAPRRSGSGAAVFDDYRALMKREPEVDEEVEEVLGRGGRKWLNLK
KSDKLRTIQCLADHSCEQPRCALCTLCTQPSSLKPPIEFYISGMRIAGDS
DWDSVLEVAEDVEDRGFSNSEEMILHLVMQCGYFNRPAVALQLLERARAR
GRLNAPVLNAVLWTLARTGKWEDALELVWISSGKLSAAVLNAVLWALART
GKWEDALELVRRLHKDPKHWGILPDLSSVALALRACADAGRWQEALKFID
DMHNQGVSIDERCLRAAVRACAQAGAWQAATHLLYGMLRDGPEPSVLAFY
AAVTACVNGGEKRVRRYHGRSLRLHCASHCCAVAEAGGSVIASHANAAGL
NGQPLPPKRLSKRRLRLPTKKAESAKKRVTSWGKKRSTTRSSCCVRSATR
ASYARLQTCLARDSIMYCVVQIIAPSSIILSGMPFCAMSLRHVKALPNDD
SEEQYAAQSAGCASSTLSFGGSRRS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat