Trimin1|336711|MIX45474_8_51 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|336711
Unique Name	Trimin1\|336711\|MIX45474_8_51
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	432

Homology

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BLAST of jgi.p|Trimin1|336711 vs. uniprot
Match: A0A836C7X9_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7X9_9STRA)

HSP 1 Score: 871 bits (2250), Expect = 0.000e+0
Identity = 431/431 (100.00%), Postives = 431/431 (100.00%), Query Frame = 0

Query:    1 MYYHASPRNTALLFTGITSAVIAVIVTLAVLSATGSLQQNNNGGSGNAQQLAAMVERELDRRNSALEAHLVTSLMVTMPDELVENGAAPKHPAVAQLPESERKRILVTGGAGFVGSHLVDRLMTQGHEVIVLDNMFTGRKKNVQHWIGHPHFQLIIHDVVEPIMLEIDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEVYGDPEEHPQRETYWGHVNQLGPRACYDEGKRVAETMMYAYHAQGGLEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDMTIYGDGSQTRSFQYVDDLVDGLVMLMNSNYHLPVNIGNPEEFSVKQFATLIKDLTGSASRIAHLPATQDDPHKRKPDIALAKRELGWEPRVHVHDGLAHTIAFFKGVLKSGEIVPTGPKAVKPGFQHGSP 431
            MYYHASPRNTALLFTGITSAVIAVIVTLAVLSATGSLQQNNNGGSGNAQQLAAMVERELDRRNSALEAHLVTSLMVTMPDELVENGAAPKHPAVAQLPESERKRILVTGGAGFVGSHLVDRLMTQGHEVIVLDNMFTGRKKNVQHWIGHPHFQLIIHDVVEPIMLEIDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEVYGDPEEHPQRETYWGHVNQLGPRACYDEGKRVAETMMYAYHAQGGLEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDMTIYGDGSQTRSFQYVDDLVDGLVMLMNSNYHLPVNIGNPEEFSVKQFATLIKDLTGSASRIAHLPATQDDPHKRKPDIALAKRELGWEPRVHVHDGLAHTIAFFKGVLKSGEIVPTGPKAVKPGFQHGSP
Sbjct:    1 MYYHASPRNTALLFTGITSAVIAVIVTLAVLSATGSLQQNNNGGSGNAQQLAAMVERELDRRNSALEAHLVTSLMVTMPDELVENGAAPKHPAVAQLPESERKRILVTGGAGFVGSHLVDRLMTQGHEVIVLDNMFTGRKKNVQHWIGHPHFQLIIHDVVEPIMLEIDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEVYGDPEEHPQRETYWGHVNQLGPRACYDEGKRVAETMMYAYHAQGGLEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDMTIYGDGSQTRSFQYVDDLVDGLVMLMNSNYHLPVNIGNPEEFSVKQFATLIKDLTGSASRIAHLPATQDDPHKRKPDIALAKRELGWEPRVHVHDGLAHTIAFFKGVLKSGEIVPTGPKAVKPGFQHGSP 431

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BLAST of jgi.p|Trimin1|336711 vs. uniprot
Match: A0A6H5KWP6_9PHAE (UDP-glucuronate decarboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWP6_9PHAE)

HSP 1 Score: 558 bits (1438), Expect = 4.480e-195
Identity = 280/373 (75.07%), Postives = 308/373 (82.57%), Query Frame = 0

Query:   54 MVERELDRRNSALEAHLVTSLMVTMPDELVENGA-APKHPAVAQLPESERKRILVTGGAGFVGSHLVDRLMTQGHEVIVLDNMFTGRKKNVQHWIGHPHFQLIIHDVVEPIMLEIDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEVYGDPEEHPQRETYWGHVNQLGPRACYDEGKRVAETMMYAYHAQGGLEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDMTIYGDGSQTRSFQYVDDLVDGLVMLMNSNYHLPVNIGNPEEFSVKQFATLIKDLTGSASRIAHLPATQDDPHKRKPDIALAKRELGWEPRVHVHDGLAHTIAFFKGVLK-SGEIVPTGPKAVKP 424
            MVE E+ RR    +  L+ S   T+P E  +  A A   P  A L E +R R+LVTGGAGFVGSHLVD LM  GH+VIVLDN FTGR+KNVQHWIGHP F LI HDVVEPI LE+DQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEVYGDPEEHPQRETYWG+VN +GPRACYDEGKRVAETMMYAY  QG +EVRVARIFNTFGPRMHPNDGRVVSNFIIQA+QGKD+TIYGDGSQTRSFQYVDDLV GL+ LMNSNY  PVNIGNP+E++VK FA LIK  T S S+I  +  T+DDP+KRKPDI LAK+EL WEP V V DGL  TI +F+G LK +GEI+PTGP A KP
Sbjct:  101 MVEVEVQRRVQQ-QVSLLNSEPHTLPSEGGKGPAVANDFPPTADLSEKDRMRVLVTGGAGFVGSHLVDALMKMGHDVIVLDNFFTGRQKNVQHWIGHPSFHLITHDVVEPIKLEVDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEVYGDPEEHPQRETYWGNVNPIGPRACYDEGKRVAETMMYAYENQGEMEVRVARIFNTFGPRMHPNDGRVVSNFIIQAIQGKDITIYGDGSQTRSFQYVDDLVRGLIALMNSNYSGPVNIGNPDEYTVKDFAELIKSSTESTSKIIFMDGTKDDPNKRKPDITLAKKELRWEPTVAVKDGLVETIKYFRGELKKTGEIIPTGPDASKP 472

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BLAST of jgi.p|Trimin1|336711 vs. uniprot
Match: A0A6V1P8H7_HETAK (UDP-glucuronate decarboxylase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P8H7_HETAK)

HSP 1 Score: 547 bits (1409), Expect = 2.080e-191
Identity = 262/377 (69.50%), Postives = 308/377 (81.70%), Query Frame = 0

Query:   51 LAAMVERELDRRNSALEAHLVTSLMVTMPDELVENGAAPKHPAVAQLPESERKRILVTGGAGFVGSHLVDRLMTQGHEVIVLDNMFTGRKKNVQHWIGHPHFQLIIHDVVEPIMLEIDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEVYGDPEEHPQRETYWGHVNQLGPRACYDEGKRVAETMMYAYHAQGGLEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDMTIYGDGSQTRSFQYVDDLVDGLVMLMNSNYHLPVNIGNPEEFSVKQFATLIKDLTGSASRIAHLPATQDDPHKRKPDIALAKRELGWEPRVHVHDGLAHTIAFFKGVLKS-GEIVPTGPKAVKPGF 426
            + AMV  E+ +++ A+       L      +     A  ++P V  L E+ERKRILVTGGAGFVGSHLVDRLM  GHEVIV+DNMFTGRK+NV HW GHPHF L+ HDVVEPIMLE+DQIYHLACPASPPHYQ+NPIKTIKTST+GTLNMLGLAKR GAR+LLTSTSEVYGDPE HPQRE YWGHVN +GPRACYDEGKRVAETMMYAYH Q G+EVRVARIFNTFG RMHPNDGRVVSNFIIQALQGK +T+YGDG QTRSFQYV DLVDGLV LMN +Y  PVN+GNP+E++++ FA  + +LT S SR+  LPATQDDP +R+PDI+LA++ LGW+PRV+V +G+  T+ +FK  L+S GEI+PTG  A +PG+
Sbjct:   48 IRAMVRVEMAKKSEAIMQMREDQLATLNFHDRESTVATGRYPQVEILSEAERKRILVTGGAGFVGSHLVDRLMLAGHEVIVVDNMFTGRKQNVGHWFGHPHFTLVEHDVVEPIMLEVDQIYHLACPASPPHYQFNPIKTIKTSTEGTLNMLGLAKRVGARILLTSTSEVYGDPEVHPQREDYWGHVNPIGPRACYDEGKRVAETMMYAYHRQAGVEVRVARIFNTFGERMHPNDGRVVSNFIIQALQGKPLTVYGDGQQTRSFQYVADLVDGLVRLMNGDYLYPVNLGNPDEYTIRDFADYVLELTNSTSRVEQLPATQDDPGQRRPDISLARKVLGWQPRVNVKEGILRTVQYFKKELESSGEIIPTGSAAARPGY 424

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BLAST of jgi.p|Trimin1|336711 vs. uniprot
Match: A0A4D9CY17_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CY17_9STRA)

HSP 1 Score: 547 bits (1410), Expect = 9.190e-191
Identity = 276/388 (71.13%), Postives = 315/388 (81.19%), Query Frame = 0

Query:   48 AQQLAAMVERELDRRNSALEAHLVT----SLMVTMPDELVENGAAPKHPAVAQLPESERKRILVTGGAGFVGSHLVDRLMTQGHEVIVLDNMFTGRKKNVQHWIGHPHFQLIIHDVVEPIMLEIDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEVYGDPEEHPQRETYWGHVNQLGPRACYDEGKRVAETMMYAYHAQGG-----LEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDMTIYGDGSQTRSFQYVDDLVDGLVMLMNSNYHLPVNIGNPEEFSVKQFATLIKDLTGSA-SRIAHLPATQDDPHKRKPDIALAKRELGWEPRVHVHDGLAHTIAFFKGVLK-SGEIVPTGPKAVKP 424
            A+ LAAM E E  RR  A  A   T       V+  ++L +      +P  A L E +R+RILVTGGAGFVGSHLVDRLM +GHEVIV+DNMFTGRKKNV HWIGHPHF LI+HDVVEPI+LE+DQIYHLACPASPPHYQYNPIKTIKTST GTLNMLGLAKR  ARMLLTSTSEVYGDP+ HPQ E+YWG+VN +GPRACYDEGKRVAETMMYAY +QGG     +EVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGK++TIYG G QTRSFQYVDDLV GL+ LMNS+Y LPVN+GNP+E+SVK FA L+++L  +  S+I HLPAT+DDP KRKPDI  AK+ELGWEP V V DGLA TI +F+  L+ +GEI PTGP+A +P
Sbjct:   99 AEILAAMAEEEKKRRQEAPHARPGTLGDGERTVSRQEQLGQ-----LYPPTATLSEGQRRRILVTGGAGFVGSHLVDRLMAEGHEVIVVDNMFTGRKKNVAHWIGHPHFMLIVHDVVEPILLEVDQIYHLACPASPPHYQYNPIKTIKTSTMGTLNMLGLAKRVRARMLLTSTSEVYGDPQIHPQPESYWGNVNPIGPRACYDEGKRVAETMMYAYRSQGGEGDSSMEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKNITIYGKGRQTRSFQYVDDLVSGLMKLMNSDYELPVNLGNPDEYSVKDFALLVRELVRNMDSQIVHLPATKDDPAKRKPDITTAKKELGWEPTVSVRDGLAKTIEYFRKELEETGEITPTGPEAARP 481

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BLAST of jgi.p|Trimin1|336711 vs. uniprot
Match: A0A7S3H6G5_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6G5_9STRA)

HSP 1 Score: 545 bits (1405), Expect = 1.080e-190
Identity = 262/341 (76.83%), Postives = 297/341 (87.10%), Query Frame = 0

Query:   92 PAVAQLPESERKRILVTGGAGFVGSHLVDRLMTQGHEVIVLDNMFTGRKKNVQHWIGHPHFQLIIHDVVEPIMLEIDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEVYGDPEEHPQRETYWGHVNQLGPRACYDEGKRVAETMMYAYHAQGGLEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDMTIYGDGSQTRSFQYVDDLVDGLVMLMNSNYHLPVNIGNPEEFSVKQFATLIKDLTGSASRIAHLPATQDDPHKRKPDIALAKRELGWEPRVHVHDGLAHTIAFFKG-VLKSGEIVPTGPKAVKPGFQHGSP 431
            P V  LP+ ER RILVTGG+GFVGSHLVDRLM  GH+VIV+DNMFTGR++NV HW+GHP+FQLIIHDV+EPIMLE+DQIYHLACPASPPHYQYNPIKTIKTST+GTLNMLGLAKR  ARMLLTSTSEVYGDPE+HPQ+ETYWG+VN +GPRACYDEGKRVAETMMYAY +Q  LEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQ KD+TIYG+G QTRSFQYVDDLV+GL+ LMN NY  PVNIGNP+E++VK+FA +IK++T S S I  LPAT+DDP KRKPDI +A RE+GW+P + V  GL  TIA+F+  +L SGEIVPTGP A KP  Q  SP
Sbjct:  104 PEVKILPDRERMRILVTGGSGFVGSHLVDRLMIAGHQVIVVDNMFTGRQRNVAHWLGHPNFQLIIHDVIEPIMLEVDQIYHLACPASPPHYQYNPIKTIKTSTEGTLNMLGLAKRVKARMLLTSTSEVYGDPEQHPQKETYWGNVNPIGPRACYDEGKRVAETMMYAYESQLDLEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQNKDITIYGNGEQTRSFQYVDDLVNGLIKLMNGNYSQPVNIGNPDEYTVKEFAVMIKEITNSTSTIKMLPATKDDPRKRKPDITVAGREIGWKPEIPVRFGLEQTIAYFRNELLLSGEIVPTGPDAAKP-QQRSSP 443

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BLAST of jgi.p|Trimin1|336711 vs. uniprot
Match: K8YTX9_NANGC (UDP-glucuronate decarboxylase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YTX9_NANGC)

HSP 1 Score: 548 bits (1412), Expect = 1.440e-190
Identity = 273/383 (71.28%), Postives = 313/383 (81.72%), Query Frame = 0

Query:   48 AQQLAAMVERELDRRNSALEAHLVT----SLMVTMPDELVENGAAPKHPAVAQLPESERKRILVTGGAGFVGSHLVDRLMTQGHEVIVLDNMFTGRKKNVQHWIGHPHFQLIIHDVVEPIMLEIDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEVYGDPEEHPQRETYWGHVNQLGPRACYDEGKRVAETMMYAYHAQGGLEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDMTIYGDGSQTRSFQYVDDLVDGLVMLMNSNYHLPVNIGNPEEFSVKQFATLIKDLT-GSASRIAHLPATQDDPHKRKPDIALAKRELGWEPRVHVHDGLAHTIAFFKGVLK-SGEIVPTGPKAVKP 424
            A+ LAAM E E  RR  A  A   T       V+  ++L +      +P  A L E +R+RILVTGGAGFVGSHLVDRLM +GHEVIV+DNMFTGRKKNV HWIGHPHF LI+HDVVEPI+LE+DQIYHLACPASPPHYQYNPIKTIKTST GTLNMLGLAKR  ARMLLTSTSEVYGDP+ HPQ E+YWG+VN +GPRACYDEGKRVAETMMYAYH Q  ++VRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKD+TIYG+G QTRSFQYV+DLV GL  LMNS+Y LPVN+GNPEE++VK FA L+K+L  GS S I H+PAT+DDP KRKPDI +A   LGW+PRV V +GL+ T+A+F+  L+ +GEIVPTGP A +P
Sbjct:  109 AEILAAMAEEEKKRRQEAPHARPGTRGDGERTVSRQEQLGQ-----LYPPTATLSEGQRRRILVTGGAGFVGSHLVDRLMAEGHEVIVVDNMFTGRKKNVAHWIGHPHFMLIVHDVVEPILLEVDQIYHLACPASPPHYQYNPIKTIKTSTMGTLNMLGLAKRVRARMLLTSTSEVYGDPQIHPQPESYWGNVNPIGPRACYDEGKRVAETMMYAYHNQSSVDVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDITIYGEGHQTRSFQYVEDLVTGLTKLMNSDYGLPVNLGNPEEYTVKDFALLVKELVVGSPSAIVHMPATKDDPAKRKPDIRVAMDVLGWQPRVPVREGLSKTVAYFRSELEDTGEIVPTGPDATRP 486

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BLAST of jgi.p|Trimin1|336711 vs. uniprot
Match: A0A4D9D2V9_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2V9_9STRA)

HSP 1 Score: 546 bits (1407), Expect = 3.720e-190
Identity = 260/335 (77.61%), Postives = 295/335 (88.06%), Query Frame = 0

Query:   92 PAVAQLPESERKRILVTGGAGFVGSHLVDRLMTQGHEVIVLDNMFTGRKKNVQHWIGHPHFQLIIHDVVEPIMLEIDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEVYGDPEEHPQRETYWGHVNQLGPRACYDEGKRVAETMMYAYHAQGGLEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDMTIYGDGSQTRSFQYVDDLVDGLVMLMNSNYHLPVNIGNPEEFSVKQFATLIKDLT-GSASRIAHLPATQDDPHKRKPDIALAKRELGWEPRVHVHDGLAHTIAFFKGVLK-SGEIVPTGPKAVKP 424
            P  A LPES+R R+LVTGGAGFVGSHLVDRLM +GHEVIV+DNMFTGRKKNV HWIGHPHF LI+HDVVEPI+LE+DQIYHLACPASPPHYQYNPIKTIKTST GTLNMLGLAKR  ARMLLTSTSEVYGDP+ HPQ E+YWG+VN +GPRACYDEGKRVAETMMYAYH Q  ++VRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKD+TIYG+G QTRSFQYV+DLV GL  LMNS+Y LPVN+GNPEE++VK+FA L+K+L  GS S I H+PAT+DDP KRKPDI +A   LGW+PRV V +GL+ T+A+F+  L+ +GEIVPTGP A +P
Sbjct:  135 PPTATLPESQRMRVLVTGGAGFVGSHLVDRLMAEGHEVIVVDNMFTGRKKNVAHWIGHPHFMLIVHDVVEPILLEVDQIYHLACPASPPHYQYNPIKTIKTSTMGTLNMLGLAKRVRARMLLTSTSEVYGDPQIHPQPESYWGNVNPIGPRACYDEGKRVAETMMYAYHNQSSVDVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDITIYGEGHQTRSFQYVEDLVTGLTKLMNSDYGLPVNLGNPEEYTVKEFALLVKELVVGSPSAIVHMPATKDDPAKRKPDIQVATDVLGWQPRVPVREGLSKTVAYFRSELEDTGEIVPTGPDATRP 469

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BLAST of jgi.p|Trimin1|336711 vs. uniprot
Match: A0A7S2FJ01_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FJ01_9STRA)

HSP 1 Score: 540 bits (1391), Expect = 3.840e-190
Identity = 252/334 (75.45%), Postives = 294/334 (88.02%), Query Frame = 0

Query:   92 PAVAQLPESERKRILVTGGAGFVGSHLVDRLMTQGHEVIVLDNMFTGRKKNVQHWIGHPHFQLIIHDVVEPIMLEIDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEVYGDPEEHPQRETYWGHVNQLGPRACYDEGKRVAETMMYAYHAQGGLEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDMTIYGDGSQTRSFQYVDDLVDGLVMLMNSNYHLPVNIGNPEEFSVKQFATLIKDLTGSASRIAHLPATQDDPHKRKPDIALAKRELGWEPRVHVHDGLAHTIAFF-KGVLKSGEIVPTGPKAVKP 424
            P VA LPES+RKRIL+TGGAGFVGS+L DRLM +GHEVIVLDNMFTGRKKNVQHWIGHPHFQ+II DVV P+ +E+DQIYHLACPASPPHYQYNPIKTIKTST+GTLNMLGLAKR  ARMLLTSTSE+YGDPE HPQ ETYWGHVN +GPRACYDEGKRVAETMMYAY  Q G++VRVARIFNTFGPRMHPNDGRVVSNFIIQALQGK MTIYG+G+QTRSFQYVDDLV+GL+ LMN +Y +PVN+GNP+E+++K FAT+I   T + S I H+PAT+DDP +RKPDI +AK ++GW+P+V V +G+  TI +F K ++ +GEI+PTGP A +P
Sbjct:    6 PPVANLPESQRKRILITGGAGFVGSNLCDRLMMEGHEVIVLDNMFTGRKKNVQHWIGHPHFQMIIGDVVNPLYMEVDQIYHLACPASPPHYQYNPIKTIKTSTEGTLNMLGLAKRVKARMLLTSTSEIYGDPEVHPQPETYWGHVNAIGPRACYDEGKRVAETMMYAYKKQEGVDVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKPMTIYGEGAQTRSFQYVDDLVNGLMKLMNGDYDMPVNLGNPDEYTIKDFATVIHKFTDTNSTIIHMPATEDDPRQRKPDITIAKSKIGWQPQVAVDEGIRKTIDYFRKELMDTGEIIPTGPDASRP 339

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BLAST of jgi.p|Trimin1|336711 vs. uniprot
Match: A0A7S2WCV9_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCV9_9STRA)

HSP 1 Score: 533 bits (1374), Expect = 2.820e-186
Identity = 266/412 (64.56%), Postives = 320/412 (77.67%), Query Frame = 0

Query:   18 TSAVIAVIVTLAVLS--ATGSLQQNNNGGSGNAQQLAAMVERELDRRNSALEAHLVTSLMVTMPDELVENGAAP--KHPAVAQLPESERKRILVTGGAGFVGSHLVDRLMTQGHEVIVLDNMFTGRKKNVQHWIGHPHFQLIIHDVVEPIMLEIDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEVYGDPEEHPQRETYWGHVNQLGPRACYDEGKRVAETMMYAYHAQGGLEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDMTIYGDGSQTRSFQYVDDLVDGLVMLMNSNYHLPVNIGNPEEFSVKQFATLIKDLTGSASRIAHLPATQDDPHKRKPDIALAKRELGWEPRVHVHDGLAHTIAFFKGVLK-SGEIVPTGPKAVKP 424
            T  ++++ + +AV+      + ++  NG S +AQ +A   +           A  V S ++    E+  + A+     P V  LPES+RKRIL+TGGAGFVGS+LVDRLM +GHEVIVLDNMFTGRKKNVQHWIGHP FQ+I+ DVV P+ +E+DQIYHLACPASPPHYQYNPIKTIKTST+GTLNMLGLAKR  AR+LLTSTSE+YGDPEEHPQRETYWG+VN +GPRACYDEGKRVAETMMYAY  Q  +EVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGK +TIYG+G QTRSFQYVDDLVDGL+ LMN  Y  PVN+GNPEE+ + +FA +I  + GS S I  LP T DDP+KR+PDI+LA  +LGW P+V V DGL  T+ +F+  L+ +GEIVPTGP+A +P
Sbjct:   12 TVRLVSIFLAVAVVGFLVGSTAREGGNGDSSHAQAMAGSEDSSXXXXXXV--AREVRSQLIHKVSEMQNHAASSGTAWPPVRTLPESQRKRILITGGAGFVGSNLVDRLMMEGHEVIVLDNMFTGRKKNVQHWIGHPSFQMIVGDVVNPVYVEVDQIYHLACPASPPHYQYNPIKTIKTSTEGTLNMLGLAKRVRARILLTSTSEIYGDPEEHPQRETYWGNVNAIGPRACYDEGKRVAETMMYAYKNQENVEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKPITIYGEGRQTRSFQYVDDLVDGLIRLMNGEYDGPVNLGNPEEYQIGEFARVIHKMVGSNSTIVKLPPTTDDPNKRRPDISLAMEKLGWRPQVKVSDGLMKTVDYFRSELEQTGEIVPTGPQASRP 421

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BLAST of jgi.p|Trimin1|336711 vs. uniprot
Match: A0A6T5SG64_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6T5SG64_9STRA)

HSP 1 Score: 526 bits (1356), Expect = 4.090e-184
Identity = 246/337 (73.00%), Postives = 288/337 (85.46%), Query Frame = 0

Query:   89 PKHPAVAQLPESERKRILVTGGAGFVGSHLVDRLMTQGHEVIVLDNMFTGRKKNVQHWIGHPHFQLIIHDVVEPIMLEIDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEVYGDPEEHPQRETYWGHVNQLGPRACYDEGKRVAETMMYAYHAQGGLEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDMTIYGDGSQTRSFQYVDDLVDGLVMLMNSNYHLPVNIGNPEEFSVKQFATLIKDLTGSASRIAHLPATQDDPHKRKPDIALAKRELGWEPRVHVHDGLAHTIAFFKGVLKS-GEIVPTGPKAVKP 424
            PK     +LP++ RK+IL+TGGAGFVGSHL DRLM++GHEV+VLDN FTGRK NV+HW+ HP+F LI HDV++PI+LE+DQIYHLACPASPPHYQYNP+KTIKTST GT+NMLGLAKR  AR+LL STSE+YGDPE HPQ ETYWG+VN LGPR+CYDEGKRVAETMMYAY  Q  + +R+ARIFNTFGPRMHPNDGRVVSNFIIQ+LQ K++TIYGDGSQTRSFQYVDDLV+GL  LMN NY  PVN+GNP+E+S+K FAT IK+ T S+S I+ LP   DDP +RKPDI+ AKREL WEPRVHV DGL  TI +FKG +++ GEI+PTGP AVKP
Sbjct:   50 PKVIQTVRLPDALRKKILITGGAGFVGSHLTDRLMSEGHEVVVLDNFFTGRKANVEHWLHHPNFSLIRHDVIQPILLEVDQIYHLACPASPPHYQYNPVKTIKTSTMGTINMLGLAKRVKARILLASTSEIYGDPEVHPQPETYWGNVNTLGPRSCYDEGKRVAETMMYAYKNQNDVSIRIARIFNTFGPRMHPNDGRVVSNFIIQSLQNKNITIYGDGSQTRSFQYVDDLVNGLTKLMNGNYDSPVNLGNPDEYSIKDFATKIKEFTQSSSEISFLPKVADDPTQRKPDISTAKRELDWEPRVHVEDGLRKTIEYFKGEVEAAGEIIPTGPDAVKP 386

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|336711 vs. uniprot

BLAST of jgi.p|Trimin1|336711 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836C7X9_9STRA	0.000e+0	100.00	UDP-glucuronate decarboxylase n=1 Tax=Tribonema mi...	[more]
A0A6H5KWP6_9PHAE	4.480e-195	75.07	UDP-glucuronate decarboxylase n=2 Tax=Ectocarpus T...	[more]
A0A6V1P8H7_HETAK	2.080e-191	69.50	UDP-glucuronate decarboxylase n=1 Tax=Heterosigma ...	[more]
A0A4D9CY17_9STRA	9.190e-191	71.13	UDP-glucuronate decarboxylase n=1 Tax=Nannochlorop...	[more]
A0A7S3H6G5_9STRA	1.080e-190	76.83	UDP-glucuronate decarboxylase n=1 Tax=Spumella elo...	[more]
K8YTX9_NANGC	1.440e-190	71.28	UDP-glucuronate decarboxylase n=1 Tax=Nannochlorop...	[more]
A0A4D9D2V9_9STRA	3.720e-190	77.61	UDP-glucuronate decarboxylase n=1 Tax=Nannochlorop...	[more]
A0A7S2FJ01_9STRA	3.840e-190	75.45	UDP-glucuronate decarboxylase n=1 Tax=Florenciella...	[more]
A0A7S2WCV9_9STRA	2.820e-186	64.56	UDP-glucuronate decarboxylase n=1 Tax=Rhizochromul...	[more]
A0A6T5SG64_9STRA	4.090e-184	73.00	UDP-glucuronate decarboxylase n=1 Tax=Skeletonema ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016040	NAD(P)-binding domain	PFAM	PF16363	GDP_Man_Dehyd	coord: 106..400 e-value: 2.3E-57 score: 195.0
None	No IPR available	GENE3D	3.40.50.720		coord: 224..410 e-value: 3.9E-60 score: 205.7 coord: 99..223 e-value: 1.7E-49 score: 170.8
None	No IPR available	PIRSR	PIRSR617711-2	PIRSR617711-2	coord: 104..137 e-value: 0.0026 score: 14.7
None	No IPR available	PANTHER	PTHR43078:SF6	UDP-GLUCURONIC ACID DECARBOXYLASE 1	coord: 97..411
None	No IPR available	CDD	cd05230	UGD_SDR_e	coord: 103..406 e-value: 0.0 score: 603.089
IPR044516	UDP-glucuronic acid decarboxylase	PANTHER	PTHR43078	UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED	coord: 97..411
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 100..407

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_85	contig	Contig_85:23455..32168 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|336711	mRNA_12153	Tribonema minus UTEX_B_3156	mRNA	Contig_85 23370..32441 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|336711|MIX45474_8_51 ID=Trimin1|336711|MIX45474_8_51|Name=jgi.p|Trimin1|336711|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=432bp
MYYHASPRNTALLFTGITSAVIAVIVTLAVLSATGSLQQNNNGGSGNAQQ
LAAMVERELDRRNSALEAHLVTSLMVTMPDELVENGAAPKHPAVAQLPES
ERKRILVTGGAGFVGSHLVDRLMTQGHEVIVLDNMFTGRKKNVQHWIGHP
HFQLIIHDVVEPIMLEIDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNM
LGLAKRTGARMLLTSTSEVYGDPEEHPQRETYWGHVNQLGPRACYDEGKR
VAETMMYAYHAQGGLEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKD
MTIYGDGSQTRSFQYVDDLVDGLVMLMNSNYHLPVNIGNPEEFSVKQFAT
LIKDLTGSASRIAHLPATQDDPHKRKPDIALAKRELGWEPRVHVHDGLAH
TIAFFKGVLKSGEIVPTGPKAVKPGFQHGSP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016040	NAD(P)-bd_dom
IPR044516	UXS
IPR036291	NAD(P)-bd_dom_sf