Trimin1|336459|MIX45222_17_84 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|336459
Unique NameTrimin1|336459|MIX45222_17_84
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length315
Homology
BLAST of jgi.p|Trimin1|336459 vs. uniprot
Match: A0A836C7S0_9STRA (TNase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7S0_9STRA)

HSP 1 Score: 501 bits (1289), Expect = 4.490e-177
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0
Query:    1 MAGVWSTSECAQLGKPGSGQWRAAHMYCTASGATGSSESLAVKARYAVVGAVAAGAMLVGTGALSIPGMTTYLTANDIPARYISAHATISGTVASVTDGDTIRVRHEPALSFLRRGSAKGKLSETAIAVRLYGVDTPETAKFGKPGQPMAKEATDFVKSEVLGKKVKIQLLRRDQYQRIVGSVQYSSGPLRSKDLTMEILRRGYGVVYTGGGAEHNGRLSQMRALETQAKARRRGMWAADAVETPGAFKARQRSGADAAPAAKVA 265
            MAGVWSTSECAQLGKPGSGQWRAAHMYCTASGATGSSESLAVKARYAVVGAVAAGAMLVGTGALSIPGMTTYLTANDIPARYISAHATISGTVASVTDGDTIRVRHEPALSFLRRGSAKGKLSETAIAVRLYGVDTPETAKFGKPGQPMAKEATDFVKSEVLGKKVKIQLLRRDQYQRIVGSVQYSSGPLRSKDLTMEILRRGYGVVYTGGGAEHNGRLSQMRALETQAKARRRGMWAADAVETPGAFKARQRSGADAAPAAKVA
Sbjct:    1 MAGVWSTSECAQLGKPGSGQWRAAHMYCTASGATGSSESLAVKARYAVVGAVAAGAMLVGTGALSIPGMTTYLTANDIPARYISAHATISGTVASVTDGDTIRVRHEPALSFLRRGSAKGKLSETAIAVRLYGVDTPETAKFGKPGQPMAKEATDFVKSEVLGKKVKIQLLRRDQYQRIVGSVQYSSGPLRSKDLTMEILRRGYGVVYTGGGAEHNGRLSQMRALETQAKARRRGMWAADAVETPGAFKARQRSGADAAPAAKVA 265          
BLAST of jgi.p|Trimin1|336459 vs. uniprot
Match: R1CVF3_EMIHU (TNase-like domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CVF3_EMIHU)

HSP 1 Score: 157 bits (398), Expect = 2.860e-43
Identity = 105/231 (45.45%), Postives = 141/231 (61.04%), Query Frame = 0
Query:   29 TASGATGSSESLA-VKARYAVVGAVAAGAMLVGTGALSIPGMTTYLTANDIPARYISAHATISGTVASVTDGDTIRVRHEPALSFL---RRGSAKGKLSETAIAVRLYGVDTPETAKFGKPGQPMAKEATDFVKSEVLGKKVKIQLLRRDQYQRIVGSVQYSSGPLRSKDLTMEILRRGYGVVYTGGGAEHNGRLSQMRALETQAKARRRGMWAAD-AVETPGAFKARQRS 254
            TAS ATGS+ SL  + +R  ++ A AA A+     +++      Y T  DIP      HAT+   V  V+DGDT+R  HEP  S L     G  KGKLS  +++VRLY +D PETAK G+PGQP+   AT FV + VLGK V+++LL RDQY R VG V  S G LR +DL+  +L +G   VY GGGA+++G  ++   LE  A+ +RRG+WA   AVETP  +K R R+
Sbjct:    9 TASAATGSTPSLRRLISRRPLLSAGAAAAL---GWSINAGRPRVYATVADIPDDEFRRHATLRCRVVKVSDGDTLRCEHEPLWSALIPSAGGPKKGKLSARSLSVRLYAIDAPETAKAGRPGQPLGGAATAFVSAAVLGKLVQVKLLSRDQYGRAVGVV--SVGALRRRDLSEALLSQGLAFVYRGGGAQYDGDRARWDRLEAAARRQRRGVWATGGAVETPAEYKRRGRA 234          
BLAST of jgi.p|Trimin1|336459 vs. uniprot
Match: A0A7S2USM1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USM1_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.390e-41
Identity = 94/217 (43.32%), Postives = 139/217 (64.06%), Query Frame = 0
Query:   50 GAVAAGAMLVGTGALSIPGMTTYL---------TANDIPARYISAHATISGTVASVTDGDTIRVRHEPALSFLRRGS-AKG-KLSETAIAVRLYGVDTPETAKFGKPGQPMAKEATDFVKSEV-LGKKVKIQLLRRDQYQRIVGSVQYSSGPLRSKDLTMEILRRGYGVVYTGGGAEHNGRLSQMRALETQAKARRRGMWAADAVETPGAFKARQRS 254
            G +  G ++VG G   +  ++  L         TA DIP   + A+  ++G V  VTDGDTIRVRH+   S+   G   KG KL+E ++AVR+ GVDTPETAKFG  GQP+ KEA  FV+ ++ LG+KV +QLL +DQY+RIV  V Y + P + KDL+ E+L++G  V+Y   GAE+ G+L     LE++AK+++ G+W  + +E+P  +K RQ++
Sbjct:   77 GGMPPGPVVVGVGIFLVGAISATLLKDSFQVFETAADIPGNLVKANKCLTGVVVKVTDGDTIRVRHK---SWGSSGKWQKGWKLAEHSLAVRIAGVDTPETAKFGSTGQPLGKEAKQFVERQLPLGRKVSVQLLSKDQYERIVAKVSYGTWPFK-KDLSEELLKKGLAVIYRQTGAEYAGKLPTYEKLESKAKSKKMGVWQ-EGLESPAEYKRRQKA 288          
BLAST of jgi.p|Trimin1|336459 vs. uniprot
Match: R1DC52_EMIHU (TNase-like domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DC52_EMIHU)

HSP 1 Score: 155 bits (391), Expect = 1.540e-41
Identity = 90/185 (48.65%), Postives = 120/185 (64.86%), Query Frame = 0
Query:   72 YLTANDIPARYISAHATISGTVASVTDGDTIRVRHEPALSFLRRGSAKGKLSETAIAVRLYGVDTPETAKFGKPGQPMAKEATDFVKSEVLGKKVKIQLLRRDQYQRIVGSVQYSSGPLRSKDLTMEILRRGYGVVYTGGGAEHNGR-LSQMRALETQAKARRRGMW--AADAVETPGAFKARQR 253
            YLTA+D+P  ++  H +I+  V +V+DGDT+RVRH P L  L  G  KGKLSE  I+VR+  VDTPETAKFG+PGQP+  +A  F K  +L ++V+++   RDQY RIVG+VQY    +R +DL+ E+LR+G   VY   GA +  R L    A+E +A+  R GMW     A   PG FKARQR
Sbjct:  111 YLTADDMPGSHLRQHRSIAAKVVAVSDGDTLRVRHTPTL--LSSGKFKGKLSENTISVRIAAVDTPETAKFGQPGQPLGADAKAFTK-RLLNRRVRVRCYARDQYGRIVGTVQYG---IRRRDLSTELLRKGLASVYRSAGAVYAQRPLGGWDAIEARAQRNRLGMWQRGVSAAMLPGEFKARQR 289          
BLAST of jgi.p|Trimin1|336459 vs. uniprot
Match: A0A6H5JVK5_9PHAE (TNase-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVK5_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 1.650e-41
Identity = 86/182 (47.25%), Postives = 108/182 (59.34%), Query Frame = 0
Query:   72 YLTANDIPARYISAHATISGTVASVTDGDTIRVRHEP--ALSFLRRGSAKGKLSETAIAVRLYGVDTPETAKFGKPGQPMAKEATDFVKSEVLGKKVKIQLLRRDQYQRIVGSVQYSSGPLRSKDLTMEILRRGYGVVYTGGGAEHNGRLSQMRALETQAKARRRGMWAADAVETPGAFKAR 251
            Y T  DIP      HAT++G V +V+DGD+IRVRH+P   L    R     K SE  + VRLY VD PE A FG P QP + EA  F K  + GK VKI+LL  DQY R V  V+Y   P R KD++ E+L+ G GVVY  GGAE++GR   +   E  AK R+ G+W+    ETP  +KAR
Sbjct:   18 YRTVPDIPKSMFKNHATLNGNVVTVSDGDSIRVRHKPNIPLPLPNRDMTGKKNSEQTLQVRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVRYGKWPFR-KDISAELLKNGLGVVYRQGGAEYDGREESLTEYENSAKRRKEGVWSRSNGETPAQYKAR 198          
BLAST of jgi.p|Trimin1|336459 vs. uniprot
Match: D7FRT5_ECTSI (TNase-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT5_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 7.900e-40
Identity = 84/182 (46.15%), Postives = 108/182 (59.34%), Query Frame = 0
Query:   72 YLTANDIPARYISAHATISGTVASVTDGDTIRVRHEP--ALSFLRRGSAKGKLSETAIAVRLYGVDTPETAKFGKPGQPMAKEATDFVKSEVLGKKVKIQLLRRDQYQRIVGSVQYSSGPLRSKDLTMEILRRGYGVVYTGGGAEHNGRLSQMRALETQAKARRRGMWAADAVETPGAFKAR 251
            Y T  DIP      HA+++G V +V+DGD+IRVRH+P   L    R     K SE  + +RLY VD PE A FG P QP + EA  F K  + GK VKI+LL  DQY R V  VQY   P R KD++ E+L+ G GVVY  GGAE++ R   +   E  AK+R+ G+W+    ETP  +KAR
Sbjct:   87 YRTVPDIPKSMFKNHASLNGNVVTVSDGDSIRVRHKPNIPLPLPNRDMTGKKNSEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVQYGKWPFR-KDISAELLKNGLGVVYRQGGAEYDSREESLTEYEKSAKSRKEGVWSRSNGETPAQYKAR 267          
BLAST of jgi.p|Trimin1|336459 vs. uniprot
Match: A0A7S2UCP4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UCP4_9STRA)

HSP 1 Score: 147 bits (371), Expect = 2.570e-39
Identity = 77/185 (41.62%), Postives = 111/185 (60.00%), Query Frame = 0
Query:   72 YLTANDIPARYISAHATISGTVASVTDGDTIRVRHEPALSFLRRGSAKGKLSETAIAVRLYGVDTPETAKFGKPGQPMAKEATDFVKSEVLGKKVKIQLLRRDQYQRIVGSVQYSSG-PLRSKDLTMEILRRGYGVVYTGGGAEHNGRLSQMRALETQAKARRRGMWAADAVETPGAFKARQRSG 255
            Y TA +IPA +   H  + G V  V DGDT R+RH P    +R  S +G+LS+  I+VR+YGVD PE  KFGKP  P A+ A  +  + V GK V+++LLRRDQY R VG V      P+   D+++ + ++GY  +YTGGGAE++G+  +       A+ RRRG+W      +P  FK + ++G
Sbjct:   44 YNTAGEIPAPWFRKHTVLYGRVVKVVDGDTFRIRHYPLYPLVRSSSYQGRLSDHTISVRIYGVDAPELGKFGKPAMPEAETAKQYTANLVDGKIVRVKLLRRDQYNRAVGKVTVRHTIPIFKTDVSIGLAKKGYATLYTGGGAEYDGKKDRFEKEIATARRRRRGIWKNGEALSPAEFKKQLKAG 228          
BLAST of jgi.p|Trimin1|336459 vs. uniprot
Match: A0A7S2TXA0_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TXA0_9EUKA)

HSP 1 Score: 146 bits (369), Expect = 3.470e-38
Identity = 78/185 (42.16%), Postives = 111/185 (60.00%), Query Frame = 0
Query:   72 YLTANDIPARYISAHATISGTVASVTDGDTIRVRHEPAL---SFLRRGSAKGKLSETAIAVRLYGVDTPETAKFGKPGQPMAKEATDFVKSEVLGKKVKIQLLRRDQYQRIVGSVQYSSGPLRSKDLTMEILRRGYGVVYTGGGAEHNGRLSQMRALETQAKARRRGMWAADAVETPGAFKARQR 253
            Y TA+D+P R IS  ATISG VA+V DGD +R+ H P +       +   KG LS   I+VRLYGVD PE AK+G   QP A E+ DF++  +  KKV+++LL +DQY R+VG V Y + P  + D++  +L+ G   VY   G  ++    ++  +E  AK  +RGMWA+D   +P  FK + R
Sbjct:  113 YKTADDVPTRLISRQATISGMVATVPDGDGLRIAHSPRIPLPDLFPKSKKKGSLSTRTISVRLYGVDAPEMAKYGYRSQPFAVESRDFLRDAIADKKVQVKLLAKDQYGRLVGKVTYGTWPFET-DVSQALLKEGLAEVYRSKGGHYDSMFDRLVDIEADAKRGKRGMWASDKPPSPAEFKRKVR 296          
BLAST of jgi.p|Trimin1|336459 vs. uniprot
Match: R1D4L7_EMIHU (TNase-like domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D4L7_EMIHU)

HSP 1 Score: 142 bits (359), Expect = 5.130e-38
Identity = 90/192 (46.88%), Postives = 116/192 (60.42%), Query Frame = 0
Query:   69 MTTYLTANDIPARYISA----HATISGTVASVTDGDTIRVRHEPALSFLRRGSAKGKLSETAIAVRLYGVDTPETAKFGKPGQPMAKEATDFVKSEVLGKKVKIQLLRRDQYQRIVGSVQYSSGPLRSKDLTMEILRRGYGVVYTGGGAEHNGR-LSQMRALETQAKARRRGMW--AADAVETPGAFKARQR 253
            M   L A  IPA          A +  +V +V+DGDT+RVRH P L  L  G  KGKLSE  I+VR+  VDTPETAKFG+PGQP+  +A  F K  +L ++V+++   RDQY RIVG+VQY    +R +DL+ E+LR+G   VY   GA +  R LS   A+E +A+  R GMW     A   PG FKARQR
Sbjct:    1 MLAILVATSIPAALTPGAKPFFAVVQTSVVAVSDGDTLRVRHTPTL--LSSGKFKGKLSENTISVRIAAVDTPETAKFGQPGQPLGADAKAFTK-RLLNRRVRVRCYARDQYGRIVGTVQYG---IRRRDLSTELLRKGLASVYRSAGAVYAQRPLSGWDAIEARAQRNRLGMWQRGVSAAMLPGEFKARQR 186          
BLAST of jgi.p|Trimin1|336459 vs. uniprot
Match: A0A4D9D0T6_9STRA (TNase-like domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0T6_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.050e-37
Identity = 91/225 (40.44%), Postives = 125/225 (55.56%), Query Frame = 0
Query:   43 KARYAVVGAVAAGAMLVGTGALSIPG-MTTYLTANDIPARYISAHATISGTVASVTDGDTIRVRHEPALSFLRRGSAKGKLSETAIAVRLYGVDTPETAKFGKPGQPMAKEATDFVKSEVLGKKVKIQLLRRDQYQRIVGSVQYSSGPLRS----------KDLTMEILRRGYGVVYTGGGAEHNGRLSQMRALETQAKARRRGMWAADAVETPGAFKARQRSGA 256
            KA+ A+  AVA+ A+ V    LS PG    Y T  +IP R   A   + G V  V DGDT+R+RH P    L      G+LSE  + +RL G+D PE  K  K GQ  A+EA  FV  +VL + V+I+LL RDQY R + SV Y  GP+ S          KDL+ ++++ G+ V+Y   GA ++G+L  +   E  AKA+R+G+W    VE P  FKAR +  A
Sbjct:   13 KAKAAMAAAVASLALGVS---LSPPGTFQRYHTVGEIPGRVFRAQTVLVGKVVRVMDGDTLRIRHTPLFPLLNNHPGSGRLSEETLIIRLAGIDAPELGKGKKQGQAGAEEAKSFVTKKVLDQSVRIKLLGRDQYARAIASVAY--GPVASFPFPLPSFLNKDLSTDLVKEGFAVIYRQKGAHYDGKLGTLERYEAWAKAKRKGVWHGRDVELPHQFKARMKKAA 232          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|336459 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C7S0_9STRA4.490e-177100.00TNase-like domain-containing protein n=1 Tax=Tribo... [more]
R1CVF3_EMIHU2.860e-4345.45TNase-like domain-containing protein n=2 Tax=Emili... [more]
A0A7S2USM1_9STRA1.390e-4143.32Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
R1DC52_EMIHU1.540e-4148.65TNase-like domain-containing protein n=2 Tax=Emili... [more]
A0A6H5JVK5_9PHAE1.650e-4147.25TNase-like domain-containing protein n=1 Tax=Ectoc... [more]
D7FRT5_ECTSI7.900e-4046.15TNase-like domain-containing protein n=1 Tax=Ectoc... [more]
A0A7S2UCP4_9STRA2.570e-3941.62Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2TXA0_9EUKA3.470e-3842.16Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
R1D4L7_EMIHU5.130e-3846.88TNase-like domain-containing protein n=1 Tax=Emili... [more]
A0A4D9D0T6_9STRA1.050e-3740.44TNase-like domain-containing protein n=1 Tax=Nanno... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016071Staphylococcal nuclease (SNase-like), OB-foldSMARTSM00318SNASE_2coord: 87..239
e-value: 1.0E-34
score: 131.4
IPR016071Staphylococcal nuclease (SNase-like), OB-foldPFAMPF00565SNasecoord: 129..238
e-value: 7.1E-22
score: 77.9
IPR016071Staphylococcal nuclease (SNase-like), OB-foldPROSITEPS50830TNASE_3coord: 87..239
score: 32.656815
IPR035437SNase-like, OB-fold superfamilyGENE3D2.40.50.90coord: 84..244
e-value: 1.6E-35
score: 123.8
IPR035437SNase-like, OB-fold superfamilySUPERFAMILY50199Staphylococcal nucleasecoord: 85..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..314
NoneNo IPR availablePANTHERPTHR12302:SF3SERINE/THREONINE-PROTEIN KINASE 31coord: 86..251
NoneNo IPR availablePANTHERPTHR12302EBNA2 BINDING PROTEIN P100coord: 86..251

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_83contigContig_83:597408..602895 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|336459mRNA_12001Tribonema minus UTEX_B_3156 mRNAContig_83 597263..602895 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|336459|MIX45222_17_84 ID=Trimin1|336459|MIX45222_17_84|Name=jgi.p|Trimin1|336459|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=315bp
MAGVWSTSECAQLGKPGSGQWRAAHMYCTASGATGSSESLAVKARYAVVG
AVAAGAMLVGTGALSIPGMTTYLTANDIPARYISAHATISGTVASVTDGD
TIRVRHEPALSFLRRGSAKGKLSETAIAVRLYGVDTPETAKFGKPGQPMA
KEATDFVKSEVLGKKVKIQLLRRDQYQRIVGSVQYSSGPLRSKDLTMEIL
RRGYGVVYTGGGAEHNGRLSQMRALETQAKARRRGMWAADAVETPGAFKA
RQRSGADAAPAAKVAAAAAPKAAQTKPKTPAKAKAQGKGAAGGATDKPQA
KPKAKPKTAAVATQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016071Staphylococal_nuclease_OB-fold
IPR035437SNase_OB-fold_sf