Trimin1|334407|MIX43170_54_69 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|334407
Unique NameTrimin1|334407|MIX43170_54_69
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length327
Homology
BLAST of jgi.p|Trimin1|334407 vs. uniprot
Match: A0A835YN61_9STRA (BRISC and BRCA1-A complex member 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN61_9STRA)

HSP 1 Score: 616 bits (1588), Expect = 3.150e-222
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0
Query:    1 MDSLADSMASVQVAEAGRASPAADTMAPPDDAQALPSEEERLLVHEMSRVPERIVLCVDVGDEMDSPWDLKGGKTLPRLTVVKKALQNFVQLKSWFSPRHSFALCSLTDEAEWLLDFTSDAEMVQNMLEGLHVQHGCDAAFDLGKLFTALQKHCPPPPTPTATSPPDAIVRVILLYGRSAAVPRVPPAEERPPLLSHPCFYLDALYVHAHPNEEVEGQPNECQGAYDALHAAISGGATATAYLCEQIHNARMLGRHLTLLLAHGAQRQPRDVLGRHVYYNADPAAAAAGGERGASQPPQARPAGEGSP 308
            MDSLADSMASVQVAEAGRASPAADTMAPPDDAQALPSEEERLLVHEMSRVPERIVLCVDVGDEMDSPWDLKGGKTLPRLTVVKKALQNFVQLKSWFSPRHSFALCSLTDEAEWLLDFTSDAEMVQNMLEGLHVQHGCDAAFDLGKLFTALQKHCPPPPTPTATSPPDAIVRVILLYGRSAAVPRVPPAEERPPLLSHPCFYLDALYVHAHPNEEVEGQPNECQGAYDALHAAISGGATATAYLCEQIHNARMLGRHLTLLLAHGAQRQPRDVLGRHVYYNADPAAAAAGGERGASQPPQARPAGEGSP
Sbjct:    1 MDSLADSMASVQVAEAGRASPAADTMAPPDDAQALPSEEERLLVHEMSRVPERIVLCVDVGDEMDSPWDLKGGKTLPRLTVVKKALQNFVQLKSWFSPRHSFALCSLTDEAEWLLDFTSDAEMVQNMLEGLHVQHGCDAAFDLGKLFTALQKHCPPPPTPTATSPPDAIVRVILLYGRSAAVPRVPPAEERPPLLSHPCFYLDALYVHAHPNEEVEGQPNECQGAYDALHAAISGGATATAYLCEQIHNARMLGRHLTLLLAHGAQRQPRDVLGRHVYYNADPAAAAAGGERGASQPPQARPAGEGSP 308          
BLAST of jgi.p|Trimin1|334407 vs. uniprot
Match: A0A836CA32_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA32_9STRA)

HSP 1 Score: 224 bits (572), Expect = 3.930e-68
Identity = 113/121 (93.39%), Postives = 114/121 (94.21%), Query Frame = 0
Query:  186 PPAEERPPLLSHPCFYLDALYVHAHPNEEVEGQPNECQGAYDALHAAISGGATATAYLCEQIHNARMLGRHLTLLLAHGAQRQPRDVLGRHVYYNADPAAAA-AGGERGASQPPQARPAGE 305
            PP  E PPLLSHPCFYLDALYVHAHPNEEV+GQ NECQG  DALHAAISGGATATAYLCEQIHNARMLGRHLTLLLAHGAQRQPRDVLGRHVYYNADPAAAA AGGERGASQPPQARPAGE
Sbjct:  175 PPRHEGPPLLSHPCFYLDALYVHAHPNEEVQGQLNECQGMCDALHAAISGGATATAYLCEQIHNARMLGRHLTLLLAHGAQRQPRDVLGRHVYYNADPAAAAVAGGERGASQPPQARPAGE 295          
BLAST of jgi.p|Trimin1|334407 vs. uniprot
Match: A0A835YNM6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNM6_9STRA)

HSP 1 Score: 176 bits (447), Expect = 3.100e-49
Identity = 103/159 (64.78%), Postives = 107/159 (67.30%), Query Frame = 0
Query:  151 QKHCPPPPTPTATSPPDAIVRVILLYGRSAAVPRVPPAEERPPLLSHPCFYLDALYVHAHPNEEVEGQPNECQGAYDALHAAISGG-ATATAYLCEQIHNARMLGRHLTLLLAHGAQRQPRDVLGRHVYYNADPAAAAAGGERGASQPPQARPAGEGSP 308
            QKHC PPPTPTATS PDA+VRVILLYGRSAAVPRV PAEERPPLLSHP  YLDALYVHAHPNEEVEGQPN+CQGAYDALHAAIS   AT +A    +           TL  A                          GGERGASQPPQARPAGEGSP
Sbjct:  191 QKHCSPPPTPTATSLPDAVVRVILLYGRSAAVPRVQPAEERPPLLSHPRLYLDALYVHAHPNEEVEGQPNDCQGAYDALHAAISDSRATFSAVTFTR-----------TLTAAXXXXX---------------------GGERGASQPPQARPAGEGSP 317          
BLAST of jgi.p|Trimin1|334407 vs. uniprot
Match: A0A7S2B1D2_9STRA (BRISC and BRCA1-A complex member 1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B1D2_9STRA)

HSP 1 Score: 121 bits (303), Expect = 4.470e-29
Identity = 87/250 (34.80%), Postives = 122/250 (48.80%), Query Frame = 0
Query:   47 MSRVPERIVLCVDVGDEMDSPWDLKGGKTLP-RLTVVKKALQNFVQLKSWFSPRHSFALCSLTDEAEWLLDFTSDAEMVQNMLEGLHVQH-------------GCDAAFDLGKLFTALQKHCPPPPTPTATSPPDAIVRVILLYGRSAAVPRVPPAEERPPLLSHPCFYLDALYVHAHPNEEVEGQPNECQGAYDAL--HAAISGGATA-TAYLCEQIHNARMLGRHLTLLLAHGAQRQPRDVLGRHVYY 279
            +  +PE I+LC+DVG+EM  PWD +    L  RL  VK+AL  FV+ K  F  RH F +C L+  A  +L FTS+ +++  +++ L V H               D  F L   F ++ + C P            I+RV++LYGRS  VP +      P LL  P  YLDALYVH   N+E       CQ  YD    H  +S      TAY  E   ++  L +H+ +LLAH  QR  +D    ++ Y
Sbjct:    3 LKTLPEDILLCIDVGEEMAEPWDARTTAHLATRLRAVKEALCCFVKQKLAFDRRHRFGVCLLSHTANIILPFTSEDDIILAVIDSLGVVHDNLVGGATGQTGFNFDDLFPLLDEFVSVDEDCAP----------SRILRVVILYGRSYTVPTL---SINPILLQRPHIYLDALYVHKKSNQEGV----LCQETYDFFIEHFDVSDSLHGKTAYFFEVASSSPRLYQHMMMLLAHPVQRDDQDTFLDNLEY 235          
BLAST of jgi.p|Trimin1|334407 vs. uniprot
Match: A0A369SD70_9METZ (BRISC and BRCA1-A complex member 1 n=1 Tax=Trichoplax sp. H2 TaxID=287889 RepID=A0A369SD70_9METZ)

HSP 1 Score: 115 bits (287), Expect = 1.790e-26
Identity = 74/230 (32.17%), Postives = 118/230 (51.30%), Query Frame = 0
Query:   51 PERIVLCVDVGDEMDSPWDLKGGKTLPRLTVVKKALQNFVQLKSWFSPRHSFALCSLTDEAEWLLDFTSDAEMVQNMLEGLHVQHGCDAAFDLGKLFTALQKHCPPPPTPTATSPPDAIVRVILLYGRSAAVPRVPPAEERPPLLSHPCFYLDALYVHAHPNEEVEGQPNECQGAYDALHAAISGGATATAYLCEQIHNARMLGRHLTLLLAHGAQRQPRDVLGRHVYYN 280
            PE+IVLC+D+ +EM++ +    G ++  L + KK +  FV  K   +P H FA+ ++ D+A W+ DFTS+ E + ++L   H +      FD+  LF  L ++          + P  +VR+IL+YGRS   P +   E    LL +  F+LD LY+H  P EE     N CQ  Y+ L   +     + +YL +   N   L  ++  LLAH  QR  +D    +++ N
Sbjct:   50 PEKIVLCMDLSNEMNTTFFKSKGSSMTALQLAKKMIDIFVNSKHIMNPLHRFAVIAMYDQANWMCDFTSNPETINSVLH--HTKPDDVHEFDMTSLFQILDENLN---IEGENAAPCYVVRIILIYGRSICKPHLSNQEVFQKLLRNHRFFLDFLYIHDIPTEE-----NNCQLIYETLCNLVK----SNSYLLDVTKNTVFLFDNMAKLLAHPMQRCLQDETNYNLHRN 265          
BLAST of jgi.p|Trimin1|334407 vs. uniprot
Match: A0A0J7KGL3_LASNI (Brisc and brca1-a complex member 1-like protein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KGL3_LASNI)

HSP 1 Score: 108 bits (270), Expect = 1.880e-23
Identity = 76/224 (33.93%), Postives = 116/224 (51.79%), Query Frame = 0
Query:   50 VPERIVLCVD-VGDEMDSPWDLKGGKTLPRLTVVKKALQNFVQLKSWFSPR-HSFALCSLTDE-AEWLLDFTSDAEMVQNMLEGLHVQHGCDA--AFDLGKLFTALQKHCPPPPTPTATSPPDAIVRVILLYGRSAAVPRVPPAEER-PPLLSHPCFYLDALYVHAHPNEEVEGQPNECQGAYDALHAAISGGATATAYLCEQIHNARMLGRHLTLLLAHGAQR 267
            +PE+I+L +D V ++  +P+ L  G T   L ++K+ ++NFV  KS   P  H +AL SL    A WL D+TS+ + + N LE +      +    +DLG+LF  +        TP    PP  + RVIL+YGRS A+P+    ++    L  +P F+LD L+VH     E     N C+  Y  + A  +   T+ +Y+ E   NA  L  ++  LLAH  QR
Sbjct:  106 LPEKIILVIDTVREQQCTPFKLGTGATFSPLYMIKRVVENFVGAKSTIQPGVHEYALMSLDSRGASWLCDYTSNVKSLVNHLESIAEDSPDEERRTYDLGQLFETIHARIA---TPATNQPPLFVSRVILIYGRSNAIPKFHSGQKYLENLTENPYFFLDVLFVH-----EPASDDNMCEAVYAEIAALDT---TSYSYIFEVGRNATKLHDNMAKLLAHPLQR 318          
BLAST of jgi.p|Trimin1|334407 vs. uniprot
Match: A0A0L0DJ21_THETB (BRISC and BRCA1-A complex member 1 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DJ21_THETB)

HSP 1 Score: 99.4 bits (246), Expect = 5.870e-21
Identity = 73/202 (36.14%), Postives = 99/202 (49.01%), Query Frame = 0
Query:   76 LPRLTVVKKALQNFVQLKSWFSPRHSFALCSLTDEAEWLLDFTSDAEMVQNMLEGLHVQHGCDAAFDLGKLFT-----ALQKHCPPPPTPTATSP-PDAIVRVILLYGRSAAVPRVPP--AEERPPLLSHPCFYLDALYVHAHPNEEVEGQPNECQGAYDALHAAISGGATATAYLCEQIHNARMLGRHLTLLLAHGAQRQP 269
            + RL   K+ + NFV  K+  SP H F L  LT+ A+    FTSD +   N L  +    G   + D+G +F       L          T  SP P  ++RVIL+Y RSA VP V P  A  R  LL+HP F+ D LY+H  P+ E     N+ Q  ++ L +     A+  +Y  E   N R L  H T+L+AH  QRQP
Sbjct:   20 MTRLDCAKRVISNFVVAKAGLSPLHQFGLGILTETAQLHTPFTSDVQAFHNALSAVRTL-GNFRSLDIGSVFALAASLGLLDDADDLAAQTPDSPDPPHVLRVILVYARSAIVPHVSPEHAALRTALLAHPHFFHDVLYLHEKPSAE-----NDPQSVFNFLTSVEV--ASPESYFLEDSTNFRRLVLHTTMLVAHPLQRQP 213          
BLAST of jgi.p|Trimin1|334407 vs. uniprot
Match: A0A0L0H707_SPIPD (BRISC and BRCA1-A complex member 1 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H707_SPIPD)

HSP 1 Score: 95.1 bits (235), Expect = 1.670e-19
Identity = 71/222 (31.98%), Postives = 101/222 (45.50%), Query Frame = 0
Query:   50 VPERIVLCVDVGDEMDSPWDLKGGKTLPRLTVVKKALQNFVQLKSWFSPRHSFALCSLTDEAEWLLDFTSDAEMVQNMLEGLHVQHGCDAAFDLGKLFTALQKHCPPPPTPTATSPPDAIVRVILLYGRSAAVPRVPPAEERPPLLSHPCFYLDALYVHAHPNEEVEGQPNECQGAYDALHAAISGGATATAYLCEQIHNARMLGRHLTLLLAHGAQRQPRD 271
            +PE+IV CVD+G+E  S   L     + RL   K+ ++ FV  KS  +P H F +C+      W   F+SD   +   +E +  +      +++  LF AL +H P        +  D ++RVIL+Y RS   P  PP  E   LL +P  + D +Y+H     + E   N  Q  YDAL      G      L E     R     +T LLAH  QR P D
Sbjct:    3 LPEKIVFCVDIGEEAGS--GLLTHPPVTRLEWAKRLMKRFVFQKSRLNPAHQFGICTAGVITLWHAQFSSDENAIDKAIEQIQSEDE-RTEWNMQTLFEALAEHIP-------NNESDYVLRVILIYCRSNVPP--PPTREYKYLLDNPRLFFDCVYLH-----DKESAENNVQAIYDALIQLEDEGKNQ---LFEVTRERRRFTIAMTKLLAHPQQRYPGD 204          
BLAST of jgi.p|Trimin1|334407 vs. uniprot
Match: UPI001F047005 (BRISC and BRCA1-A complex member 1-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F047005)

HSP 1 Score: 96.7 bits (239), Expect = 2.680e-19
Identity = 69/224 (30.80%), Postives = 113/224 (50.45%), Query Frame = 0
Query:   51 PERIVLCVDVGDEMDSPWDLKGGKTLPRLTVVKKALQNFVQLKSWFSPRHSFALCSLTDEAEWLLDFTSDAEMVQNMLEGLHV-QHGCDAAFDLGKLFTALQKHCPPPPTPTATS-PPDAIVRVILLYGRS-AAVPRVPPAEERPPLLSH---PCFYLDALYVHAHPNEEVEGQPNECQGAYDALHAAISGGATATAYLCE-QIHNARMLGRHLTLLLAHGAQR 267
            PE+I+LC D+  E++   ++   +T+    ++KKA++ FV+ K   + +H FA+ +   E  W+ DF++D  ++ + +  +H  Q+G    FD+      L+ H P P + T    PP+ +VRVIL+YGRS +  P +   + +     +   P F+ D LY+H  PNE+     N CQ  YD L        T   Y+ E   + A  +      LLAH  QR
Sbjct:   88 PEKIILCFDLSSELN---EVIINRTVA-FELLKKAIEIFVKHKLGLNNKHEFAIITFEKETLWVQDFSNDLGLILDTICSIHPNQNGPCGQFDMTSFLETLENHVPLPKSSTIPDIPPENVVRVILIYGRSHSETPNLSDKKAQQIFNRYTACPLFFFDVLYIHDVPNED-----NNCQAIYDGLCTLDE---TEKCYVFEVSTYVAARIHEFTAKLLAHPLQR 299          
BLAST of jgi.p|Trimin1|334407 vs. uniprot
Match: A0A2C9KMD8_BIOGL (BRISC and BRCA1-A complex member 1 n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9KMD8_BIOGL)

HSP 1 Score: 96.3 bits (238), Expect = 5.580e-19
Identity = 70/225 (31.11%), Postives = 111/225 (49.33%), Query Frame = 0
Query:   51 PERIVLCVDVGDEMDSP-WDLKGGKTLPRLTVVKKALQNFVQLKSWFSPRHSFALCSLTDEAEWLLDFTSDAEMVQNMLEGLHVQHGCDAAFDLGKLFTALQKHCPPPPTPTATS--PPDAIVRVILLYGRSAAVPRVPPAEERPPLLSHPCFYLDALYVHAHPNEEVEGQPNECQGAYDALHAAISGGATATAYLCEQIHNARMLGRHLTLLLAHGAQRQPRDV 272
            PE+I+LC+D+ DEM++  +  K G     L + K+A++ FV  KS  +P+H FA     +++  +  FT  A+ +   L+   ++      F+L  L+  ++ +   P         PP  IVRVIL+YGRS +VP V     +  L S P F+ D LY+H  P+E      N+C+  ++ L      G +   Y+ E      +L     LL AH  QR PR +
Sbjct:  116 PEKIILCLDLSDEMNTTTFKSKAGDKYSGLELGKRAIRMFVLHKSQMNPKHEFAFLIFHEDSTMIQSFTPRAQDILTALDDSIIETHKSGPFNLANLYETIKANIEVPAANETCELLPPPYIVRVILVYGRSQSVPVVTNTTAKEELESSPYFFTDVLYIHESPSEL-----NQCEEIFNVLCKLDHNGFS---YIFEVCKYTPILNSGAKLL-AHPLQR-PRQL 330          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|334407 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YN61_9STRA3.150e-222100.00BRISC and BRCA1-A complex member 1 n=1 Tax=Tribone... [more]
A0A836CA32_9STRA3.930e-6893.39Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YNM6_9STRA3.100e-4964.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2B1D2_9STRA4.470e-2934.80BRISC and BRCA1-A complex member 1 n=1 Tax=Dictyoc... [more]
A0A369SD70_9METZ1.790e-2632.17BRISC and BRCA1-A complex member 1 n=1 Tax=Trichop... [more]
A0A0J7KGL3_LASNI1.880e-2333.93Brisc and brca1-a complex member 1-like protein n=... [more]
A0A0L0DJ21_THETB5.870e-2136.14BRISC and BRCA1-A complex member 1 n=1 Tax=Thecamo... [more]
A0A0L0H707_SPIPD1.670e-1931.98BRISC and BRCA1-A complex member 1 n=2 Tax=Spizell... [more]
UPI001F0470052.680e-1930.80BRISC and BRCA1-A complex member 1-like n=1 Tax=Xe... [more]
A0A2C9KMD8_BIOGL5.580e-1931.11BRISC and BRCA1-A complex member 1 n=1 Tax=Biompha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410von Willebrand factor, type A domaincoord: 44..176
e-value: 3.2E-6
score: 29.1
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 53..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 306..326
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 283..326
IPR026126BRISC and BRCA1-A complex member 1PANTHERPTHR15660UNCHARACTERIZEDcoord: 36..286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_76contigContig_76:398076..400464 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|334407mRNA_11365Tribonema minus UTEX_B_3156 mRNAContig_76 398076..401025 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|334407|MIX43170_54_69 ID=Trimin1|334407|MIX43170_54_69|Name=jgi.p|Trimin1|334407|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=327bp
MDSLADSMASVQVAEAGRASPAADTMAPPDDAQALPSEEERLLVHEMSRV
PERIVLCVDVGDEMDSPWDLKGGKTLPRLTVVKKALQNFVQLKSWFSPRH
SFALCSLTDEAEWLLDFTSDAEMVQNMLEGLHVQHGCDAAFDLGKLFTAL
QKHCPPPPTPTATSPPDAIVRVILLYGRSAAVPRVPPAEERPPLLSHPCF
YLDALYVHAHPNEEVEGQPNECQGAYDALHAAISGGATATAYLCEQIHNA
RMLGRHLTLLLAHGAQRQPRDVLGRHVYYNADPAAAAAGGERGASQPPQA
RPAGEGSPQRRSSTSPPAERMQQQQE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036465vWFA_dom_sf
IPR026126BABAM1