Trimin1|275424|gm1.3268_g (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|275424
Unique NameTrimin1|275424|gm1.3268_g
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length318
Homology
BLAST of jgi.p|Trimin1|275424 vs. uniprot
Match: A0A835Z8K2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8K2_9STRA)

HSP 1 Score: 627 bits (1618), Expect = 4.190e-227
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0
Query:    1 MRLVSGTRNAIAWTGTAASLITATYCVHELCYFYINVAQDRASCAQFQAWFVMRGISNILAFLHLFLRANAVNAFNPKWPPWRCFGIVLMLATVGTIAAATVTRTAKPVPNPPFPDRCEEFIEPVPFTLNWIAQLLCHVFFAAFFIWPLRSHMRDVRAAHTGSSVAPATLFDRLKRRASKVRGAPASRDSSGADDNGTADFPGGGNGDVYQALVTRAFASLTGSALFTLLAAVLSVLSVYGVLSDVPVVGFSILDNGFTLASIYFANSAKWNYHNNFDSNHDNFNSNARHGSAAPQRIASNWTPSRVGRSNEVAAAF 317
            MRLVSGTRNAIAWTGTAASLITATYCVHELCYFYINVAQDRASCAQFQAWFVMRGISNILAFLHLFLRANAVNAFNPKWPPWRCFGIVLMLATVGTIAAATVTRTAKPVPNPPFPDRCEEFIEPVPFTLNWIAQLLCHVFFAAFFIWPLRSHMRDVRAAHTGSSVAPATLFDRLKRRASKVRGAPASRDSSGADDNGTADFPGGGNGDVYQALVTRAFASLTGSALFTLLAAVLSVLSVYGVLSDVPVVGFSILDNGFTLASIYFANSAKWNYHNNFDSNHDNFNSNARHGSAAPQRIASNWTPSRVGRSNEVAAAF
Sbjct:    1 MRLVSGTRNAIAWTGTAASLITATYCVHELCYFYINVAQDRASCAQFQAWFVMRGISNILAFLHLFLRANAVNAFNPKWPPWRCFGIVLMLATVGTIAAATVTRTAKPVPNPPFPDRCEEFIEPVPFTLNWIAQLLCHVFFAAFFIWPLRSHMRDVRAAHTGSSVAPATLFDRLKRRASKVRGAPASRDSSGADDNGTADFPGGGNGDVYQALVTRAFASLTGSALFTLLAAVLSVLSVYGVLSDVPVVGFSILDNGFTLASIYFANSAKWNYHNNFDSNHDNFNSNARHGSAAPQRIASNWTPSRVGRSNEVAAAF 317          
BLAST of jgi.p|Trimin1|275424 vs. uniprot
Match: A0A835Z9W2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9W2_9STRA)

HSP 1 Score: 273 bits (698), Expect = 4.260e-86
Identity = 151/283 (53.36%), Postives = 186/283 (65.72%), Query Frame = 0
Query:    1 MRLVSGTRNAIAWTGTAASLITATYCVHELCYFYINVAQDRASCAQFQAWFVMRGISNILAFLHLFLRANAVNAFNPKWPPWRCFGIVLMLATVGTIAAATVTRTAKPVPNPPFPDRCEEFIEPVPFTLNWIAQLLCHVFFAAFFIWPLRSHMRDVRAAHTGSSVAPATLFDRL----------KRRASKVRGAPASRDSSGADDNGT-ADFPGG----GNGDVYQALVTRAFASLTGSALFTLLAAVLSVLSVYGVLSDVPVVGFSILDNGFTLASIYFANS 268
            MRLV G RNA+AWTG  ASL TA YCVHELCY++++VA   ASCAQF+A+F++RG SN LAFLHLFLRANAVN+ NPKWPPWR  GI L + T+G +A    TR AKP  +PP P RC+EFI P+P TL W  QL+CH+ FA FFIWPL  HMR +R A  G +  P    +R                       +++   A  +GT A+ P G     +  VY+ LV RA  S+  SALFT++AAVL +L VYGV+  +PVVG SILDNGFTL SI+FANS
Sbjct:   31 MRLVYGVRNAMAWTGFLASLFTAIYCVHELCYYFVDVADQTASCAQFKAFFILRGASNSLAFLHLFLRANAVNSLNPKWPPWRRAGIALTVVTLGVLALVAATRGAKPTASPPHPSRCQEFIAPIPATLKWTLQLICHIAFAGFFIWPLLGHMRMLRKA--GLAQHPPHAVERCCGGCAWWCSXXXXXXXXXXXXXAQEDGDAPGSGTPAETPTGFTTPRHDTVYRQLVLRAVVSVAASALFTVVAAVLVMLDVYGVVDGIPVVGLSILDNGFTLGSIFFANS 311          
BLAST of jgi.p|Trimin1|275424 vs. uniprot
Match: A0A835ZIT3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIT3_9STRA)

HSP 1 Score: 261 bits (668), Expect = 7.240e-82
Identity = 136/259 (52.51%), Postives = 175/259 (67.57%), Query Frame = 0
Query:   11 IAWTGTAASLITATYCVHELCYFYINVAQDRASCAQFQAWFVMRGISNILAFLHLFLRANAVNAFNPKWPPWRCFGIVLMLATVGTIAAATVTRTAKPVPNPPFPDRCEEFIEPVPFTLNWIAQLLCHVFFAAFFIWPLRSHMRDVRAAHTGSSVAPATLFDRLKRRASKVRGAPASRDSSGADDNGTADFPGGGNGD-VYQALVTRAFASLTGSALFTLLAAVLSVLSVYGVLSDVPVVGFSILDNGFTLASIYFANS 268
            I WTG  AS++T  YCV+ELCY+Y+N+A   A CA F+ W VMR  SN LAFLHLFLRA+AVNA NP WPPWR FGI L++AT+  + A   TR+A+ V NPPF +RCE+  EPV F L W+ QLLCH+ F+  FI+PL  HMR VRAA    +  P +   R+ RR  +     A+ ++   +D+ TA   G   GD VYQ LV RA  SL  S+LFT+  AV+  L ++G +SD+P+V F+ILDNGFTL +IYFANS
Sbjct:   31 IHWTGFLASVLTIFYCVYELCYYYVNMASRDAHCAVFKVWIVMRTASNALAFLHLFLRADAVNAINPNWPPWRRFGIALLVATLIMLIAVAATRSARLVRNPPFGERCEQSYEPVSFALKWVVQLLCHITFSLMFIYPLVDHMRAVRAAGLAVAHTPRSFLRRVLRRTVQKPSVTATENARAREDSNTAPVTGSMRGDTVYQRLVRRAVISLVASSLFTIAVAVMVFLDIFGAVSDMPLVAFAILDNGFTLGAIYFANS 289          
BLAST of jgi.p|Trimin1|275424 vs. uniprot
Match: A0A835Z9N7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9N7_9STRA)

HSP 1 Score: 144 bits (364), Expect = 9.730e-37
Identity = 110/269 (40.89%), Postives = 137/269 (50.93%), Query Frame = 0
Query:    2 RLVSGTRNAIAWTGTAASLITATYCVHELCYFYINVAQDRASCAQFQAWF-VMRGISNILAFLHLFLRANAVNAFNPKWPPWRCFGIVLMLATVGTIAAATVTRTAKPVPNPPFPDRCEEFIEPVPFTLNWIAQLLCHVFFAAFFIWPLRSHMRDVRAAHTGSSVAPATLFDRLKRRA-SKVRGAPASRDSSGADDNGTADFPGGGNGDVYQALVTRAFASLTGSALFTLLAAVLSVLSVYGVLSDVPVVGFSILDNGFTLASIYFANS 268
            R V    NA+  TG  ASLI  TYC  +L YFY     +  SC Q +    V +G SN LAFLHLFLRA+AVN  N  W PWR FGI L      T+ A   TRTA  V       RC+   +   F   W+ QLL HV F+  F++PLR HM+++  A        A           S V  +  SR S  A+   T    G    DV++ LV RA  S+  S+ FTL+ A++  +       D+PVV  S LDNG TLASIYFANS
Sbjct:   32 RCVLRKANAMNITGFMASLIAVTYCFLKLIYFYTGA--EELSCDQLKIILGVGQGSSNALAFLHLFLRADAVNKINTHWRPWRWFGIALTALNWATLLAVCFTRTA--VLATSGSQRCKFTFDQSTFEAKWVVQLLNHVVFSMMFVFPLRQHMKEMHRAGVEHQRQHAXXXXXXXXAPNSSVAMSTGSRTS--AEPTATGSSRGA---DVFRRLVWRATLSMAISSAFTLVVAIMVFVQFADPNIDLPVVALSNLDNGLTLASIYFANS 291          
BLAST of jgi.p|Trimin1|275424 vs. uniprot
Match: A0A835Z0T7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0T7_9STRA)

HSP 1 Score: 134 bits (336), Expect = 4.010e-32
Identity = 91/268 (33.96%), Postives = 131/268 (48.88%), Query Frame = 0
Query:    8 RNAIAWTGTAASLITATYCVHELCYFYINVAQDRASCAQFQAWFVMRGISNILAFLHLFLRANAVNAFNPKWPPWRCFGIVLMLATVGTIAAATVTRTAKPVPNPPF-PDRCEEFIEPVPFTLNWIAQLLCHVFFAAFFIWPLRSHMRDVRAAH---TGSSVAPATLFD----RLKRRASKVRGAPASRDSSGADDNGTADFPGGGNGDVYQALVTRAFASLTGSALFTLLAAVLSVLSVYGVLSDVPVVGFSILDNGFTLASIYFAN 267
            RN +  TG  A++I A Y + +  + +  +     +  +     + +G+SN  AFLHLFLRA+A+NA NPKWPPWR  GIVL +A      A +  R    +    F  +RC  + E +     W+ QL+ HV F+ FF WPL  HMR +  A+      +VA +  F      L+R  +  RG                         VY+ LV RA   +  S++FTL+  +L+V+       D+P+   SILDNG TL SI FAN
Sbjct:   51 RNMMNATGFLAAIIAAVYTLVKALHLFSGIGLSECNALRISLG-LGQGLSNGFAFLHLFLRADAINAINPKWPPWRAVGIVLTVANWVCFLAVSFLRKGSAIDQ--FGAERCVFYFEEISSNFKWVLQLINHVLFSLFFAWPLVKHMRAMERANMDTVAGTVARSGFFSVLLYLLRRHRTSSRGVA-----------------------VYERLVRRAVVPMVVSSVFTLVVTILNVIDFQAPDLDIPITSLSILDNGLTLGSICFAN 292          
BLAST of jgi.p|Trimin1|275424 vs. uniprot
Match: A0A836CG65_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG65_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.020e-24
Identity = 77/223 (34.53%), Postives = 98/223 (43.95%), Query Frame = 0
Query:    6 GTRNAIAWTGTAASLITATYCVHELCYFYINVAQDRASCAQFQAWFVMRGISNILAFLHLFLRANAVNAFNPKWPPWRCFGIVLMLATVGTIAAATVTRTAKPVPNPPFPDRCEEFIEPVPFTLNWIAQLLCHVFFAAFFIWPLRSHMRDVRAAHTGSSVAPATLFDRLKRRASKVRGAPASRDSSGADDNGTADFPGGGNGDVYQALVTRAFASLTGSALFT 228
            G RN I  T   A+LI   Y   EL YFY  +     +C    AW V+R ISN LAFLHLFLRA+  N+ NP W  WR  GI L +     +  A   R    +P      RC    E V FTL W++QL+CHV            HM +++ +   S++                    A+R SS  D             DVY+ LV RA  +L  SA FT
Sbjct:   56 GKRNTITATALLAALICVVYTTWELAYFYAGLMAQPDTCKTATAWGVLRSISNALAFLHLFLRADVANSINPHWHMWRRVGIALTVINWALLIVAPALRRITLIPTK-LGARCSAQYESVSFTLMWVSQLVCHVAXXXXXXXXXXRHMNELKQSTADSALEAGV----------------AARGSSRDD-------------DVYRTLVRRAAGALALSATFT 248          
BLAST of jgi.p|Trimin1|275424 vs. uniprot
Match: A0A836CF01_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF01_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.090e-19
Identity = 62/155 (40.00%), Postives = 78/155 (50.32%), Query Frame = 0
Query:    3 LVSGTRNAIAWTGTAASLITATYCVHELCYFYINVAQDRASCAQFQAWFVMRGISNILAFLHLFLRANAVNAFNPKWPPWRCFGIVLMLATVGTIAAATVTRTAKPVPNPPFPDRCEEFIEPVPFTLNWIAQLLCHVFFAAFFIWPLRSHMRDVR 157
            LV   RNAI  T  AA+ +++   V +L YF++    D + C    AW +MR  S+ LAFLHLFLRANA           R FG +L+LA V  +          P        RC     PV F L W AQL  HV FA  F+WPL SH+R +R
Sbjct:   31 LVMRKRNAITVTALAAAFLSSLNTVWQLAYFHLGKMTDLSICKIGYAWGIMRTTSSALAFLHLFLRANAAXXXXXXXXXXRAFGALLLLANVLLLVLVPSLWLLTPK-RYDTGVRCVVIFPPVTFLLMWAAQLASHVVFAGLFVWPLLSHVRAMR 184          
BLAST of jgi.p|Trimin1|275424 vs. uniprot
Match: A0A835Z0Y4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Y4_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 3.400e-14
Identity = 54/162 (33.33%), Postives = 82/162 (50.62%), Query Frame = 0
Query:   18 ASLITATYCVHELCYFYINVAQDRASCAQFQAWFVMRGISNILAFLHLFLRANAVNAFNPKWPPWRCFGIVLMLATVGTIAAATVTRTAKPVPNPPFPDRCEEFIEPVPFTLNWIAQLLCHVFFAAFFIWPLRSHMRDV---RAAHTGSSVAPATLFDRLKR 176
            AS +  TY  ++  Y++  +       +      +++G  N +AFLHLF RA+A+NA NP+W   R F + L++A    +    V R  K V N P   RC      V F + ++ QL+ HV  +AFF+WPL  H+R +   R A  G+S + A      KR
Sbjct:   48 ASALALTYAAYKTGYWFAGLGPYYDCQSVLMVAGILQGACNSMAFLHLFQRADAINALNPRWRYLRIFALFLVIANWAVLGGVVVDRKFKEV-NGPDGTRCLFIPGLVVFRVKFLVQLVNHVVQSAFFVWPLIVHIRLLDKGRRAGLGTSSSVAVYRHMAKR 208          
BLAST of jgi.p|Trimin1|275424 vs. uniprot
Match: A0A835ZCN3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCN3_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.480e-9
Identity = 78/280 (27.86%), Postives = 113/280 (40.36%), Query Frame = 0
Query:    9 NAIAWTGTAASLITATYCVHELCYFYINVAQDRASCAQFQAWFVMRGISNILAFLHLFLRANAVNAFNPKWPPWRCFGIVLMLATVGTIAAATVTRTAKPVPNPPFPDRCEEFIEPVPFTLN------------WIAQLLCHVF-------FAAFFIWPLRSHMRDV---RAAHTGSSVAPATLFDRLKRRASKVRGAPASRDSSGADDNGTADFPGGGNGDVYQALVTRAFASLTGSALFTLLAAVLSVLSVYGVLSDVPVVGFSILDNGFTLASIYFA 266
            N  A+  +A  LI A Y   +L Y++  +    +         +++G  N +AFLHLFLRA+A+N+ N KW   R  G+VL+ A    + A  V RT K V  P   DR      P    L              ++ +   +F        +AFF+WPL  H+R +   R A  G+S   A                                        +Y+ +  RA A++    L TLL  V++VL ++      P    SILD    LASIYFA
Sbjct:   37 NLSAFLASALGLIYAAY---KLGYWFAGIGAFFSCRNVMMVGGIVQGACNSMAFLHLFLRADAINSLNSKWRYLRVVGMVLVAANWAALGAVIVDRTYKEVQGP---DRTRCLFVPGTVVLRVNHTHHISNRPPGVSLIEVRLFPLLPVGVQSAFFVWPLTVHIRLMDKGRKAGLGTSATCA----------------------------------------IYRHMARRAVAAML---LSTLLTVVVTVLVIFAQRKAYPTSVLSILDISGILASIYFA 267          
BLAST of jgi.p|Trimin1|275424 vs. uniprot
Match: A0A835Z900_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z900_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 3.050e-7
Identity = 44/151 (29.14%), Postives = 67/151 (44.37%), Query Frame = 0
Query:  116 DRCEEFIEPVPFTLNWIAQLLCHVFFAAFFIWPLRSHMRDVRAAHTGSSVAPATLFDRLKRRASKVRGAPASRDSSGADDNGTADFPGGGNGDVYQALVTRAFASLTGSALFTLLAAVLSVLSVYGVLSDVPVVGFSILDNGFTLASIYFA 266
            +RC    E   F L W+ QL  H+  A  F+WPL +H+R VRA   G S   +         +     +  SR S                 ++++AL+ RA  ++  S  + ++   L +         +PV   +ILDNG TLASIY+A
Sbjct:  115 ERCVWTFEEATFKLKWLVQLFNHILMAGLFVWPLLAHVRGVRATSLGRSGGGSXXXXXXXXXSVTKARSSFSRTS-----------------ELWEALIMRAVVAMAISVTYCVIMTGLVIAKYDDPSLPIPVFALAILDNGVTLASIYYA 248          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|275424 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A835Z8K2_9STRA4.190e-227100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z9W2_9STRA4.260e-8653.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZIT3_9STRA7.240e-8252.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z9N7_9STRA9.730e-3740.89Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z0T7_9STRA4.010e-3233.96Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CG65_9STRA1.020e-2434.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CF01_9STRA2.090e-1940.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z0Y4_9STRA3.400e-1433.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZCN3_9STRA1.480e-927.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z900_9STRA3.050e-729.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_14contigContig_14:1019555..1025426 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|275424mRNA_3238Tribonema minus UTEX_B_3156 mRNAContig_14 1019555..1025426 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|275424|gm1.3268_g ID=Trimin1|275424|gm1.3268_g|Name=jgi.p|Trimin1|275424|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=318bp
MRLVSGTRNAIAWTGTAASLITATYCVHELCYFYINVAQDRASCAQFQAW
FVMRGISNILAFLHLFLRANAVNAFNPKWPPWRCFGIVLMLATVGTIAAA
TVTRTAKPVPNPPFPDRCEEFIEPVPFTLNWIAQLLCHVFFAAFFIWPLR
SHMRDVRAAHTGSSVAPATLFDRLKRRASKVRGAPASRDSSGADDNGTAD
FPGGGNGDVYQALVTRAFASLTGSALFTLLAAVLSVLSVYGVLSDVPVVG
FSILDNGFTLASIYFANSAKWNYHNNFDSNHDNFNSNARHGSAAPQRIAS
NWTPSRVGRSNEVAAAF*
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