Trimin1|181425|e_gw1.256.1.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|181425
Unique NameTrimin1|181425|e_gw1.256.1.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length106
Homology
BLAST of jgi.p|Trimin1|181425 vs. uniprot
Match: A0A835Z0K7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0K7_9STRA)

HSP 1 Score: 202 bits (514), Expect = 8.660e-66
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
Query:    1 RVGYHAVPSLEPLHLHVISQDLDGHSMKTPKHWNTFATPFFLETEVCEPLPLAQNAKTLQHMCPHCCLXXXXXXXXXXALVRQSTAIHVSAQHKHVNHAQWSYFK 105
            RVGYHAVPSLEPLHLHVISQDLDGHSMKTPKHWNTFATPFFLETEVCEPLPLAQNAKTLQHMCPHCCLXXXXXXXXXXALVRQSTAIHVSAQHKHVNHAQWSYFK
Sbjct:    1 RVGYHAVPSLEPLHLHVISQDLDGHSMKTPKHWNTFATPFFLETEVCEPLPLAQNAKTLQHMCPHCCLXXXXXXXXXXALVRQSTAIHVSAQHKHVNHAQWSYFK 105          
BLAST of jgi.p|Trimin1|181425 vs. uniprot
Match: A0A093EUS7_TYTAL (HIT domain-containing protein (Fragment) n=1 Tax=Tyto alba TaxID=56313 RepID=A0A093EUS7_TYTAL)

HSP 1 Score: 70.5 bits (171), Expect = 4.840e-13
Identity = 33/63 (52.38%), Postives = 42/63 (66.67%), Query Frame = 0
Query:    1 RVGYHAVPSLEPLHLHVISQDLDGHSMKTPKHWNTFATPFFLETE-VCEPLPLAQNAKTLQHM 62
            R+GYHA+PS+  LHLHVISQD D  ++KT KHWN+F T FFL +E V E +      K   H+
Sbjct:   67 RLGYHAIPSMSQLHLHVISQDFDSPALKTKKHWNSFTTDFFLNSEDVIEMVRSKGKVKVKDHV 129          
BLAST of jgi.p|Trimin1|181425 vs. uniprot
Match: A0A8C4V838_FALTI (Aprataxin n=1 Tax=Falco tinnunculus TaxID=100819 RepID=A0A8C4V838_FALTI)

HSP 1 Score: 72.0 bits (175), Expect = 1.150e-12
Identity = 30/55 (54.55%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    1 RVGYHAVPSLEPLHLHVISQDLDGHSMKTPKHWNTFATPFFLETEVCEPLPLAQN 55
            R+GYHA+PS+  LHLHVISQD D  ++KT KHWN+F T +FL +E  +P+    N
Sbjct:  256 RLGYHAIPSMSQLHLHVISQDFDSPALKTKKHWNSFTTDYFLNSEAGKPIQETGN 310          
BLAST of jgi.p|Trimin1|181425 vs. uniprot
Match: W7TK61_9STRA (Basic helix-loop-helix family protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TK61_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.710e-12
Identity = 29/61 (47.54%), Postives = 42/61 (68.85%), Query Frame = 0
Query:    1 RVGYHAVPSLEPLHLHVISQDLDGHSMKTPKHWNTFATPFFLETEVCEPLPLAQNAKTLQH 61
            R+GYH++PSL PLH+H++SQD D  ++KT +HWN+F TPFFL+    E         T++H
Sbjct:  394 RMGYHSLPSLRPLHIHIVSQDFDSPALKTKRHWNSFTTPFFLDLLQVETALQIHGKVTVRH 454          
BLAST of jgi.p|Trimin1|181425 vs. uniprot
Match: A0A8C3UJ45_CATUS (Aprataxin n=1 Tax=Catharus ustulatus TaxID=91951 RepID=A0A8C3UJ45_CATUS)

HSP 1 Score: 68.9 bits (167), Expect = 1.750e-12
Identity = 28/45 (62.22%), Postives = 36/45 (80.00%), Query Frame = 0
Query:    1 RVGYHAVPSLEPLHLHVISQDLDGHSMKTPKHWNTFATPFFLETE 45
            R+GYHA+PS+  LHLHVISQD D  ++KT KHWN+F T +FL +E
Sbjct:  109 RLGYHAIPSMSQLHLHVISQDFDSPALKTKKHWNSFTTDYFLNSE 153          
BLAST of jgi.p|Trimin1|181425 vs. uniprot
Match: UPI000BF630ED (aprataxin-like n=1 Tax=Varroa jacobsoni TaxID=62625 RepID=UPI000BF630ED)

HSP 1 Score: 69.7 bits (169), Expect = 1.780e-12
Identity = 30/46 (65.22%), Postives = 37/46 (80.43%), Query Frame = 0
Query:    1 RVGYHAVPSLEPLHLHVISQDLDGHSMKTPKHWNTFATPFFLETEV 46
            R+GYHAVPS+  LHLHVISQD D  S+KT KHWN+F T FF+++ V
Sbjct:   97 RLGYHAVPSMAQLHLHVISQDFDSPSLKTKKHWNSFTTAFFVDSGV 142          
BLAST of jgi.p|Trimin1|181425 vs. uniprot
Match: A0A7S2SCH0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCH0_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 2.280e-12
Identity = 30/46 (65.22%), Postives = 36/46 (78.26%), Query Frame = 0
Query:    1 RVGYHAVPSLEPLHLHVISQDLDGHSMKTPKHWNTFATPFFLETEV 46
            R GYHA+PSLEPLH+HVISQD D   +KT KHWN+F T +F+  EV
Sbjct:  345 RCGYHAIPSLEPLHIHVISQDFDSPCLKTKKHWNSFTTDYFVPCEV 390          
BLAST of jgi.p|Trimin1|181425 vs. uniprot
Match: A0A0V0GCY0_TRIDM (Putative aprataxin (Fragment) n=2 Tax=Triatominae TaxID=70999 RepID=A0A0V0GCY0_TRIDM)

HSP 1 Score: 68.9 bits (167), Expect = 2.670e-12
Identity = 28/45 (62.22%), Postives = 36/45 (80.00%), Query Frame = 0
Query:    1 RVGYHAVPSLEPLHLHVISQDLDGHSMKTPKHWNTFATPFFLETE 45
            R G+HA+PSL+ LHLHVIS D +  ++KT KHWN+F TPFFL+ E
Sbjct:   79 RYGFHAIPSLQRLHLHVISDDFNSSALKTAKHWNSFTTPFFLDAE 123          
BLAST of jgi.p|Trimin1|181425 vs. uniprot
Match: G1N246_MELGA (HIT domain-containing protein n=3 Tax=Neognathae TaxID=8825 RepID=G1N246_MELGA)

HSP 1 Score: 68.9 bits (167), Expect = 5.310e-12
Identity = 28/45 (62.22%), Postives = 36/45 (80.00%), Query Frame = 0
Query:    1 RVGYHAVPSLEPLHLHVISQDLDGHSMKTPKHWNTFATPFFLETE 45
            R+GYHA+PS+  LHLHVISQD D  ++KT KHWN+F T +FL +E
Sbjct:  123 RLGYHAIPSMSQLHLHVISQDFDSPALKTKKHWNSFTTEYFLNSE 167          
BLAST of jgi.p|Trimin1|181425 vs. uniprot
Match: UPI001C67E2FF (aprataxin isoform X2 n=2 Tax=Tyto alba TaxID=56313 RepID=UPI001C67E2FF)

HSP 1 Score: 70.5 bits (171), Expect = 5.610e-12
Identity = 33/63 (52.38%), Postives = 42/63 (66.67%), Query Frame = 0
Query:    1 RVGYHAVPSLEPLHLHVISQDLDGHSMKTPKHWNTFATPFFLETE-VCEPLPLAQNAKTLQHM 62
            R+GYHA+PS+  LHLHVISQD D  ++KT KHWN+F T FFL +E V E +      K   H+
Sbjct:  325 RLGYHAIPSMSQLHLHVISQDFDSPALKTKKHWNSFTTDFFLNSEDVIEMVRSKGKVKVKDHV 387          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|181425 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z0K7_9STRA8.660e-66100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A093EUS7_TYTAL4.840e-1352.38HIT domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A8C4V838_FALTI1.150e-1254.55Aprataxin n=1 Tax=Falco tinnunculus TaxID=100819 R... [more]
W7TK61_9STRA1.710e-1247.54Basic helix-loop-helix family protein n=2 Tax=Nann... [more]
A0A8C3UJ45_CATUS1.750e-1262.22Aprataxin n=1 Tax=Catharus ustulatus TaxID=91951 R... [more]
UPI000BF630ED1.780e-1265.22aprataxin-like n=1 Tax=Varroa jacobsoni TaxID=6262... [more]
A0A7S2SCH0_9STRA2.280e-1265.22Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0V0GCY0_TRIDM2.670e-1262.22Putative aprataxin (Fragment) n=2 Tax=Triatominae ... [more]
G1N246_MELGA5.310e-1262.22HIT domain-containing protein n=3 Tax=Neognathae T... [more]
UPI001C67E2FF5.610e-1252.38aprataxin isoform X2 n=2 Tax=Tyto alba TaxID=56313... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF11969DcpS_Ccoord: 1..32
e-value: 9.2E-6
score: 26.1
NoneNo IPR availablePANTHERPTHR12486APRATAXIN-RELATEDcoord: 1..60
IPR036265HIT-like superfamilyGENE3D3.30.428.10coord: 1..98
e-value: 5.3E-19
score: 70.7
IPR036265HIT-like superfamilySUPERFAMILY54197HIT-likecoord: 1..47
IPR026963Aprataxin-likePANTHERPTHR12486:SF4APRATAXINcoord: 1..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_256contigContig_256:93588..93905 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|181425mRNA_18574Tribonema minus UTEX_B_3156 mRNAContig_256 93588..93905 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|181425|e_gw1.256.1.1 ID=Trimin1|181425|e_gw1.256.1.1|Name=jgi.p|Trimin1|181425|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=106bp
RVGYHAVPSLEPLHLHVISQDLDGHSMKTPKHWNTFATPFFLETEVCEPL
PLAQNAKTLQHMCPHCCLETEVCAPCPLALVRQSTAIHVSAQHKHVNHAQ
WSYFK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036265HIT-like_sf
IPR026963Aprataxin-like