Trimin1|181295|e_gw1.249.5.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|181295
Unique NameTrimin1|181295|e_gw1.249.5.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length449
Homology
BLAST of jgi.p|Trimin1|181295 vs. uniprot
Match: A0A835Z1B2_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1B2_9STRA)

HSP 1 Score: 828 bits (2139), Expect = 4.450e-302
Identity = 448/448 (100.00%), Postives = 448/448 (100.00%), Query Frame = 0
Query:    1 MLRVNLLGRYVVKSTGSGAPTRVALSPPTRTAWAFFVRRHTFSGDARNPGAAAREPLHRHPHQVTVLQRASHEHGIASHSTTRQQHITRGGKTSPSSSSARSIHALGRRKKWNDALQIFRSIEEPTALEVRALLGTMAYNHQPQHAMIALRQLQGSGAVTFHDYELAIHAHAKELPLVALELLHKMEREGFGWTLRARGTVLQALGKDGRLNAALHLIDEMEQRNFSPTDLDYLVLIVACARGKSGMRAGDRGGSEQALEFLQRMQDKGPVPDIRHYNAAMKVCVTKGXXXXXXXXXXXXXXXXXXXXXXXXXXXLDAIGKAGQVAEMMAWYGEMLAIGGVLPDLVIMTTLLDNAGKAGEVRIAEGIWSETRDRQLAPNNRTYNALINCYATARQPDKAEGVLAEMVQSAAVKPDAISFNRCVKLCMAVHLTAYGPIAVQEQRSHFIC 448
            MLRVNLLGRYVVKSTGSGAPTRVALSPPTRTAWAFFVRRHTFSGDARNPGAAAREPLHRHPHQVTVLQRASHEHGIASHSTTRQQHITRGGKTSPSSSSARSIHALGRRKKWNDALQIFRSIEEPTALEVRALLGTMAYNHQPQHAMIALRQLQGSGAVTFHDYELAIHAHAKELPLVALELLHKMEREGFGWTLRARGTVLQALGKDGRLNAALHLIDEMEQRNFSPTDLDYLVLIVACARGKSGMRAGDRGGSEQALEFLQRMQDKGPVPDIRHYNAAMKVCVTKGXXXXXXXXXXXXXXXXXXXXXXXXXXXLDAIGKAGQVAEMMAWYGEMLAIGGVLPDLVIMTTLLDNAGKAGEVRIAEGIWSETRDRQLAPNNRTYNALINCYATARQPDKAEGVLAEMVQSAAVKPDAISFNRCVKLCMAVHLTAYGPIAVQEQRSHFIC
Sbjct:    1 MLRVNLLGRYVVKSTGSGAPTRVALSPPTRTAWAFFVRRHTFSGDARNPGAAAREPLHRHPHQVTVLQRASHEHGIASHSTTRQQHITRGGKTSPSSSSARSIHALGRRKKWNDALQIFRSIEEPTALEVRALLGTMAYNHQPQHAMIALRQLQGSGAVTFHDYELAIHAHAKELPLVALELLHKMEREGFGWTLRARGTVLQALGKDGRLNAALHLIDEMEQRNFSPTDLDYLVLIVACARGKSGMRAGDRGGSEQALEFLQRMQDKGPVPDIRHYNAAMKVCVTKGXXXXXXXXXXXXXXXXXXXXXXXXXXXLDAIGKAGQVAEMMAWYGEMLAIGGVLPDLVIMTTLLDNAGKAGEVRIAEGIWSETRDRQLAPNNRTYNALINCYATARQPDKAEGVLAEMVQSAAVKPDAISFNRCVKLCMAVHLTAYGPIAVQEQRSHFIC 448          
BLAST of jgi.p|Trimin1|181295 vs. uniprot
Match: A0A836CEZ1_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEZ1_9STRA)

HSP 1 Score: 432 bits (1111), Expect = 8.770e-145
Identity = 249/427 (58.31%), Postives = 284/427 (66.51%), Query Frame = 0
Query:    1 MLRVNLLGRYVVKSTGSGAPTRVALSPPTRTAWAFFVRRHTFSGDARNPGAAAREPLHRHPHQVTVLQRASHEHGIASHSTTRQQHITRGGKTSPSSSSARSIHALGRRKKWNDALQIFRSIEEPTALEVRALLGTMAYNHQPQHAMIALRQLQGSGAVTFHDYELAIHAHAKELPLVALELLHKMEREGFGWTLRARGTVLQALGKDGRLNAALHLIDEMEQRNFSPTDLDYLVLIVACARGKSGMRAGDRGGSEQALEFLQRMQDKGPVPDIRHYNAAMKVCVTKGXXXXXXXXXXXXXXXXXXXXXXXXXXXLDAIGKAGQVAEMMAWYGEMLAIGGVLPDLVIMTTLLDNAGKAGEVRIAEGIWSETRDRQLAPNNRTYNALINCYATARQPDKAEGVLAEMVQSAAVKPDAISFNRCVKLCM 427
            MLR +LLGRYVV S GSG PT+VAL   T T WAF   +++FSGDAR+PGAA RE  + H H ++VLQRAS EHGI S+  TRQQH +RGGK  PS++ A  IH LGR+KKWNDALQIF+SIEEPTALE RALL TMAYNHQP+HAM ALRQL+ +GAV  HDY+L IHA+AKELPL ALELLH+MEREGFGWT RA  TVLQA GK GRL+AAL LID MEQRN +P+D                                      G   D+R +N                                     L+AIG+AGQV EMMAWY EML  GG+ PD V+MTTLLDNAGKAGE+ IAEGIW E RDRQLAP+ + YNALI CYATARQPDKAE V+AEM QSAAVKPDAI+   CV L M
Sbjct:    1 MLRAHLLGRYVVNSIGSGVPTQVALRS-TLTTWAFV--KYSFSGDARDPGAAGRESPYWHRHHLSVLQRASLEHGIGSNFATRQQHTSRGGKP-PSTTPACRIHTLGRQKKWNDALQIFKSIEEPTALEARALLATMAYNHQPRHAMFALRQLRNTGAVASHDYQLIIHAYAKELPLEALELLHQMEREGFGWTHRACSTVLQAFGKAGRLSAALQLIDVMEQRNCNPSD--------------------------------------GIKLDVRSWNVL-----------------------------------LNAIGRAGQVTEMMAWYREMLKSGGLQPDTVLMTTLLDNAGKAGELGIAEGIWREMRDRQLAPDVKAYNALITCYATARQPDKAEQVIAEMCQSAAVKPDAIALTSCVPLNM 350          
BLAST of jgi.p|Trimin1|181295 vs. uniprot
Match: A0A835YWM4_9STRA (Smr domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWM4_9STRA)

HSP 1 Score: 308 bits (790), Expect = 4.770e-97
Identity = 171/296 (57.77%), Postives = 196/296 (66.22%), Query Frame = 0
Query:  137 MAYNHQPQHAMIALRQLQGSGAVTFHDYELAIHAHAKELPLVALELLHKMEREGFGWTLRARGTVLQALGKDGRLNAALHLIDEMEQRNFSPTDLDYLVLIVACARGKSG----MRAGDRGGSEQALEFLQRMQDKGPVPDIRHYNAAMKVCVTKGXXXXXXXXXXXXXXXXXXXXXXXXXXXLDAIGKAGQVAEMMAWYGEMLAIGGVLPDLVIMTTLLDNAGK-----AGEVRIAEGIWSETRDRQLAPNNRTYNALINCYATARQPDKAEGVLAEMVQSAAVKPDAISFNRCV 423
            MAYNHQPQHAM ALRQLQGSGAV FHDY+LAIHA+AKELP  ALELLH+ EREG  WT RA  T LQA GK GRLNAAL LI EMEQR  SP  +DYL L  ACARG +     +RAGDRGGSEQ LE L+RMQDKGPVPDIRHY+AAMKVC+T+G                               G    V  ++      + + G+ PD+     LL+  G+     AGE+ IAEGIWSE  + QLAP+ +TYNALI CY TA+QPDKAE VLAEM+QSAAVKPDAI F   +
Sbjct:    1 MAYNHQPQHAMTALRQLQGSGAVAFHDYQLAIHAYAKELPFEALELLHETEREGLAWTHRACSTTLQAFGKAGRLNAALQLIGEMEQRGISPDHIDYLTLTGACARGNTRGNNVIRAGDRGGSEQVLEILRRMQDKGPVPDIRHYSAAMKVCMTEGNSAKAVNIFRSMRDQHVMR------------GVLQWVMSVLIDAPFCIVLQGIKPDVRSWNVLLNAIGRTGQVAAGELGIAEGIWSEMLEHQLAPDVKTYNALIMCYTTAKQPDKAEEVLAEMIQSAAVKPDAIMFTSAI 284          
BLAST of jgi.p|Trimin1|181295 vs. uniprot
Match: A0A835Z801_9STRA (Smr domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z801_9STRA)

HSP 1 Score: 286 bits (732), Expect = 4.380e-88
Identity = 183/325 (56.31%), Postives = 199/325 (61.23%), Query Frame = 0
Query:   89 RGGKTSPSSSSARSIHALGRRKKWNDALQIFRSIEEPTALEVRALLGTMAYNHQPQHAMIALRQLQGSGAVTFHDYELAIHAHAKELPLVALELLHKMEREGFGWTLRARGTVLQALGKDGRLNAALHLIDEMEQRNFSPTDLDYLVLIVACARGKSGMRAGDRGGSEQALEFLQRMQDKGPVPDIRHYNAAMKVCVTKGXXXXXXXXXXXXXXXXXXXXXXXXXXXLDAIGKAGQVAEMMAWYGEMLAIGGVLPDLVIMTTLLDNAGKAGEVRIAEGIWSETRDRQLAPNNRTYNALINCYATARQPDKAEGVLAEMVQSAAVK 413
            RGGK SP  SSA  IH+LGRRKKWNDALQ+F SIEEPTALEVRALL T+AYN QP+HAM ALRQL+  GAVTF+DYELAIH HAKE P+ ALELLH+MEREGFGWT RA  TVLQA GKDGRLNAAL L DEM+QRN +P   DYL+LI+ CA  K   R                              AAMKVCVT+           XXXXXXXXXXXXXXXXX                                               IAEGIW E  DRQLAPN  TYNALINCYA A+Q DKAE V+AEM+QSAAVK
Sbjct:    2 RGGKPSPPGSSANRIHSLGRRKKWNDALQVFESIEEPTALEVRALLATVAYNDQPRHAMTALRQLRNIGAVTFYDYELAIHVHAKEFPIQALELLHEMEREGFGWTQRACSTVLQAFGKDGRLNAALQLTDEMQQRNINPNSTDYLILIMGCACSKDVRRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAMKVCVTERDMANAVSIFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXNIAEGIWREMHDRQLAPNETTYNALINCYAMAKQADKAENVVAEMIQSAAVK 325          
BLAST of jgi.p|Trimin1|181295 vs. uniprot
Match: A0A836CK12_9STRA (PPR_long domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK12_9STRA)

HSP 1 Score: 267 bits (682), Expect = 2.320e-84
Identity = 138/219 (63.01%), Postives = 161/219 (73.52%), Query Frame = 0
Query:  204 ALGKDGRLNAALHLIDEMEQRNFSPTDLDYLVLIVACARGKSGMRAGDRGGSEQALEFLQRMQDKGPVPDIRHYNAAMKVCVTKGXXXXXXXXXXXXXXXXXXXXXXXXXXX--LDAIGKAGQVAEMMAWYGEMLAIGGVLPDLVIMTTLLDNAGKAGEVRIAEGIWSETRDRQLAPNNRTYNALINCYATARQPDKAEGVLAEMVQSAAVKPDAISFN 420
            A GK GRL+AAL LIDEM+QR  SP D+DYL+LIVAC  GK+ MRAGDRGGS+QALE LQRMQD GPVPDIRHY+AAMKVC T+G                             LDAIG+AGQVAEMMAWY EML  GG+ P+ VI+ ++L +AG AGE+ IAEGIW E RDRQL PN+ +Y+A INCYATA+QPDKAEGVL EMVQSA +KP+AI+F 
Sbjct:    1 AFGKAGRLSAALQLIDEMKQRGISPNDVDYLMLIVACGHGKNVMRAGDRGGSKQALELLQRMQDTGPVPDIRHYDAAMKVCATEGDLAKAINIFESARDKAMGMKPNERSWGALLDAIGRAGQVAEMMAWYAEMLTSGGLQPNNVILNSMLAHAGTAGELGIAEGIWREMRDRQLEPNSYSYSAFINCYATAKQPDKAEGVLTEMVQSATIKPNAIAFT 219          
BLAST of jgi.p|Trimin1|181295 vs. uniprot
Match: A0A836CK07_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK07_9STRA)

HSP 1 Score: 283 bits (725), Expect = 3.790e-84
Identity = 159/284 (55.99%), Postives = 194/284 (68.31%), Query Frame = 0
Query:    8 GRYVVKSTGSGAP-TRVALSPPTRTAWAFFVRRHTFSGDARNPGAAAREPLHRHPHQVTVLQRASHEHGIASHSTTRQQHITRGGKTSPSSSSARSIHALGRRKKWNDALQIFRSIEEPTALEVRALLGTMAYNHQPQHAMIALRQLQGSGAVTFHDYELAIHAHAKELPLVALELLHKMEREGFGWTLRARGTVLQALGKDGRLNAALHLIDEMEQRNFSPTDL--DYLVLIVACARGK---SGMRAGD-RGGSEQALEFLQRMQDKGPVPDIRHYNAAMKVC 284
            GRY+ +  GSGAP TR  L       WAF       S +AR+PGAA   P + H  Q+ +LQRASH+HGIAS+ TTR QH +RGGK+ PS+S A SI ALG++K+W DA  IF +I +PTALE RALL TMAYNHQP+HAM ALR+LQGSGA+  HDYELAI AH K LP  A+ELL +M+REGF WT RA  TVLQA GK GRLNAAL LI EM+    SP  L  D+ +LI  C R +      R GD RGGS+ A+  LQ M+D    PD+ ++NAA++VC
Sbjct:    9 GRYLARCLGSGAPPTRGVLQQIQAATWAFAKH---LSSNARDPGAATHGPPYWHRQQLNLLQRASHQHGIASNFTTRLQHSSRGGKSPPSASPADSIRALGKQKRWQDAFNIFNAISKPTALEARALLATMAYNHQPRHAMTALRRLQGSGAMISHDYELAIQAHEKGLPFEAMELLREMKREGFRWTHRACSTVLQASGKAGRLNAALQLIKEMQGVGMSPNSLRVDFQILICNCVRDERVDDETRPGDSRGGSKMAMTLLQLMRDARLAPDVLNFNAALRVC 289          
BLAST of jgi.p|Trimin1|181295 vs. uniprot
Match: A0A835Z5Z3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Z3_9STRA)

HSP 1 Score: 261 bits (668), Expect = 1.430e-80
Identity = 144/236 (61.02%), Postives = 154/236 (65.25%), Query Frame = 0
Query:  186 MEREGFGWTLRARGTVLQALGKDGRLNAALHLIDEMEQRNFSPTDLDYLVLIVACARGK-SGMRAGDRGGSEQALEFLQRMQDKGPVPDIRHYNAAMKVCVTKGXXXXXXXXXXXXXXXXXXXXXXXXXXXLDAIGKAGQVAEMMAWYGEMLAIGGVLPDLVIMTTLLDNAGKAGEVRIAEGIWSETRDRQLAPNNRTYNALINCYATARQPDKAEGVLAEMVQSAAVKPDAISFN 420
            MEREG  WT RA  TVLQA GK GRLNAAL LI EMEQR  SP  +DYL LI ACARGK +G RAGDRGGSEQALE LQRMQDKGPVPDIRHY AAMKVCVT+G                           LDAIGKAGQVAEMMAWYGEMLA G                    E  I E IW +  DRQL P+ ++YN  I+CYATA QPD+AEGVLAEM QSAAVKP+A  FN
Sbjct:    1 MEREGLAWTHRACSTVLQAFGKAGRLNAALQLIGEMEQRGISPDHIDYLTLIGACARGKKNGTRAGDRGGSEQALELLQRMQDKGPVPDIRHYTAAMKVCVTEGDSAKAVNIFRSMRDQGIKPNAHSWGALLDAIGKAGQVAEMMAWYGEMLASGXXXXXXXXXXXXXXXXXXXXEPGIVERIWRDMLDRQLEPDVKSYNTRISCYATANQPDQAEGVLAEMCQSAAVKPNAFCFN 236          
BLAST of jgi.p|Trimin1|181295 vs. uniprot
Match: A0A836CEM5_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEM5_9STRA)

HSP 1 Score: 257 bits (656), Expect = 1.100e-77
Identity = 140/237 (59.07%), Postives = 159/237 (67.09%), Query Frame = 0
Query:  186 MEREGFGWTLRARGTVLQALGKDGRLNAALHLIDEMEQRNFSPTDLDYLVLIVACARGKSGMRAGD-RGGSEQALEFLQRMQDKGPVPDIRHYNAAMKVCVTKGXXXXXXXXXXXXXXXXXXXXXXXXXXXLDAIGKAGQVAEMMAWYGEMLAIGGVLPDLVIMTTLLDNAGKAGEVRIAEGIWSETRDRQLAPNNRTYNALINCYATARQPDKAEGVLAEMVQSAAVKPDAISFNR 421
            ME++GF WT  A G VL A GK GRLN A+ LID M     SP    YL LI  C R  +   AGD RGGS++ALE LQ M+D GPVP+IRH+ AA+ VCV +                            L AIG+AGQ+AEMMA Y EM A GGV P+LVIMTTLLDNAGKAGEV IAEGIWSE RDRQLAP+ +TYNALI CYATA+QPDK EGVLAE ++SAAVKPDAI F R
Sbjct:    1 MEQDGFRWTQVACGAVLVACGKAGRLNDAVQLIDNMRNHRVSPDGRTYLTLIQQCVRNSASTHAGDSRGGSKRALELLQLMKDAGPVPNIRHFTAAIMVCVAERNGISAITIFRMMQHEGIRPDLQSWGALLHAIGRAGQLAEMMACYREMCATGGVQPNLVIMTTLLDNAGKAGEVSIAEGIWSEMRDRQLAPDVKTYNALITCYATAKQPDKVEGVLAERIRSAAVKPDAIMFTR 237          
BLAST of jgi.p|Trimin1|181295 vs. uniprot
Match: A0A835YW77_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW77_9STRA)

HSP 1 Score: 213 bits (543), Expect = 2.170e-61
Identity = 116/209 (55.50%), Postives = 134/209 (64.11%), Query Frame = 0
Query:  210 RLNAALHLIDEMEQRNFSPTDLDYLVLIVACARGKSGMRAGDRGGSEQALEFLQRMQDKGPVPDIRHYNAAMKVCVTKGXXXXXXXXXXXXXXXXXXXXXXXXXXXLDAIGKAGQVAEMMAW---YGEMLAIGGVLPDLVIMTTLLDNAGKAGEVRIAEGIWSETRDRQLAPNNRTYNALINCYATARQPDKAEGVLAEMVQSAAVKPD 415
            RLNAAL LIDEM+QRN SP+D DYL+LIVAC RGK   R GDRGGSEQALE LQRMQDKGPVPD+RHY+AA+ VCVT+G                           LDA G+AG   + M W   Y    A      + +      ++   AGE+ +AEGIW E RDRQL PN  +YNA INCYATA+QPDKAEGVL EMVQSA +KPD
Sbjct:   13 RLNAALQLIDEMQQRNISPSDADYLILIVACDRGKRRTRGGDRGGSEQALELLQRMQDKGPVPDLRHYSAAITVCVTEGDLANAVNTFQSMRDKGIKPNDWSWAALLDAFGRAGGRNDGMVWGDGYNRRTA------NCLHHDHSAESCWAAGELSVAEGIWREMRDRQLEPNAYSYNASINCYATAKQPDKAEGVLTEMVQSATIKPD 215          
BLAST of jgi.p|Trimin1|181295 vs. uniprot
Match: A0A835ZB42_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB42_9STRA)

HSP 1 Score: 174 bits (441), Expect = 1.630e-49
Identity = 88/110 (80.00%), Postives = 95/110 (86.36%), Query Frame = 0
Query:  179 ALELLHKMEREGFGWTLRARGTVLQALGKDGRLNAALHLIDEMEQRNFSPTDLDYLVLIVACARGKSGMRAGDRGGSEQALEFLQRMQDKGPVPDIRHYNAAMKVCVTKG 288
            ALEL H+MEREGFGWT RA  TVL A GK GRLNAAL LIDEME+R FSP D+DYL LI AC RGK+ +RAGDRGGS+QALEFLQRMQDKGPVPDIRHY AAMKVCVT+G
Sbjct:    3 ALEL-HEMEREGFGWTQRACSTVLLACGKAGRLNAALQLIDEMEKRTFSPNDVDYLKLIEACVRGKNVIRAGDRGGSKQALEFLQRMQDKGPVPDIRHYAAAMKVCVTEG 111          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|181295 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z1B2_9STRA4.450e-302100.00PPR_long domain-containing protein n=1 Tax=Tribone... [more]
A0A836CEZ1_9STRA8.770e-14558.31PPR_long domain-containing protein n=1 Tax=Tribone... [more]
A0A835YWM4_9STRA4.770e-9757.77Smr domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A835Z801_9STRA4.380e-8856.31Smr domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A836CK12_9STRA2.320e-8463.01PPR_long domain-containing protein (Fragment) n=1 ... [more]
A0A836CK07_9STRA3.790e-8455.99PPR_long domain-containing protein n=1 Tax=Tribone... [more]
A0A835Z5Z3_9STRA1.430e-8061.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CEM5_9STRA1.100e-7759.07PPR_long domain-containing protein n=1 Tax=Tribone... [more]
A0A835YW77_9STRA2.170e-6155.50PPR_long domain-containing protein n=1 Tax=Tribone... [more]
A0A835ZB42_9STRA1.630e-4980.00PPR_long domain-containing protein n=1 Tax=Tribone... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 203..358
e-value: 2.7E-10
score: 40.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 248..371
e-value: 5.8E-25
score: 90.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 372..430
e-value: 4.1E-9
score: 38.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 63..247
e-value: 1.0E-14
score: 56.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 200..229
e-value: 5.7E-5
score: 21.0
coord: 277..309
e-value: 4.2E-4
score: 18.3
coord: 382..415
e-value: 5.3E-7
score: 27.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 382..408
e-value: 1.1E-5
score: 25.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 273..307
score: 9.448698
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 194..228
score: 9.306201
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 379..413
score: 10.040608
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..102
NoneNo IPR availablePANTHERPTHR47941PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIALcoord: 103..237
coord: 179..424
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 109..339

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_249contigContig_249:111536..113490 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|181295mRNA_17970Tribonema minus UTEX_B_3156 mRNAContig_249 111536..113490 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|181295|e_gw1.249.5.1 ID=Trimin1|181295|e_gw1.249.5.1|Name=jgi.p|Trimin1|181295|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=449bp
MLRVNLLGRYVVKSTGSGAPTRVALSPPTRTAWAFFVRRHTFSGDARNPG
AAAREPLHRHPHQVTVLQRASHEHGIASHSTTRQQHITRGGKTSPSSSSA
RSIHALGRRKKWNDALQIFRSIEEPTALEVRALLGTMAYNHQPQHAMIAL
RQLQGSGAVTFHDYELAIHAHAKELPLVALELLHKMEREGFGWTLRARGT
VLQALGKDGRLNAALHLIDEMEQRNFSPTDLDYLVLIVACARGKSGMRAG
DRGGSEQALEFLQRMQDKGPVPDIRHYNAAMKVCVTKGDSAKAISMFQSA
RDQGMQPNIRSWGALLDAIGKAGQVAEMMAWYGEMLAIGGVLPDLVIMTT
LLDNAGKAGEVRIAEGIWSETRDRQLAPNNRTYNALINCYATARQPDKAE
GVLAEMVQSAAVKPDAISFNRCVKLCMAVHLTAYGPIAVQEQRSHFIC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033443PPR_long
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat