Trimin1|180791|e_gw1.228.48.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|180791
Unique NameTrimin1|180791|e_gw1.228.48.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length311
Homology
BLAST of jgi.p|Trimin1|180791 vs. uniprot
Match: A0A835Z117_9STRA (Proliferating cell nuclear antigen n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z117_9STRA)

HSP 1 Score: 592 bits (1527), Expect = 1.810e-213
Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0
Query:    1 MQKKKSKRPTKRKRSAKGAQSPPPVAAAEEPNADALALPSEPEVPEGTVVCMRTHHTQQWRTLIDALKDLIPESPVTFGASGMKLISMDPAHVALINLQVCSEFYYCKRETTVGLNVAALYRMLRNLTTGGYLLEINLLESDPDHLSILVNNEEKRTRTSNRLKLLRLPEEIITIPPTVFQRVLSIPSADFQRYIRELSGVSNKISIRSTKDMLLLSASGTMGTTEIEVRPTASGMHWQHIESAASDEEEEAVEGVYLAKYLERFSRPLDPVVEIFMRPAYPLVLRYSMSTAVVRLVIAQCAREEGGGDE 310
            MQKKKSKRPTKRKRSAKGAQSPPPVAAAEEPNADALALPSEPEVPEGTVVCMRTHHTQQWRTLIDALKDLIPESPVTFGASGMKLISMDPAHVALINLQVCSEFYYCKRETTVGLNVAALYRMLRNLTTGGYLLEINLLESDPDHLSILVNNEEKRTRTSNRLKLLRLPEEIITIPPTVFQRVLSIPSADFQRYIRELSGVSNKISIRSTKDMLLLSASGTMGTTEIEVRPTASGMHWQHIESAASDEEEEAVEGVYLAKYLERFSRPLDPVVEIFMRPAYPLVLRYSMSTAVVRLVIAQCAREEGGGDE
Sbjct:    1 MQKKKSKRPTKRKRSAKGAQSPPPVAAAEEPNADALALPSEPEVPEGTVVCMRTHHTQQWRTLIDALKDLIPESPVTFGASGMKLISMDPAHVALINLQVCSEFYYCKRETTVGLNVAALYRMLRNLTTGGYLLEINLLESDPDHLSILVNNEEKRTRTSNRLKLLRLPEEIITIPPTVFQRVLSIPSADFQRYIRELSGVSNKISIRSTKDMLLLSASGTMGTTEIEVRPTASGMHWQHIESAASDEEEEAVEGVYLAKYLERFSRPLDPVVEIFMRPAYPLVLRYSMSTAVVRLVIAQCAREEGGGDE 310          
BLAST of jgi.p|Trimin1|180791 vs. uniprot
Match: A0A835YX88_9STRA (Proliferating cell nuclear antigen n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX88_9STRA)

HSP 1 Score: 420 bits (1079), Expect = 6.580e-145
Identity = 210/284 (73.94%), Postives = 245/284 (86.27%), Query Frame = 0
Query:   26 AAAEEPNADALALPSEPEVPEGTVVCMRTHHTQQWRTLIDALKDLIPESPVTFGASGMKLISMDPAHVALINLQVCSEFYYCKRETTVGLNVAALYRMLRNLTTGGYLLEINLLESDPDHLSILVNNEEKRTRTSNRLKLLRLPEEIITIPPTVFQRVLSIPSADFQRYIRELSGVSNKISIRSTKDMLLLSASGTMGTTEIEVRPTASGMHWQHIESAASDEEEEAVEGVYLAKYLERFSRPLDPVVEIFMRPAYPLVLRYSMSTAVVRLVIAQCAREEGGGD 309
            A A E  A A+A P++  VPEG +VCMRTHHTQQWRTL DALKDLI ESPVTFG +GMKL+SMDPAHVAL+NLQ+ SE YYCKRE TVGLNVAALY+MLRNLTTGGY+LE++L E DPDHL +L++NE+KRTRTSNR KLLRLP+EIITIPP VFQRVLSIPSADFQRYIRELSGVSNKI IRST+D+L+LSA GT G+TEIE+RPTASGMHWQ I+S A+DE    VEGV+ ++Y+ERF+RPLD VVEIF++ AYPLVLRY +  A VRLVIAQC  ++ GG+
Sbjct:   44 APAGEDAAAAVACPTDEAVPEGILVCMRTHHTQQWRTLTDALKDLISESPVTFGPAGMKLVSMDPAHVALVNLQIQSEHYYCKREITVGLNVAALYKMLRNLTTGGYILELSLSEDDPDHLRVLISNEDKRTRTSNRPKLLRLPDEIITIPPAVFQRVLSIPSADFQRYIRELSGVSNKIKIRSTRDVLVLSAEGTSGSTEIEIRPTASGMHWQFIDSEATDE---VVEGVFYSRYVERFARPLDSVVEIFIKQAYPLVLRYQLQAATVRLVIAQCTDDDAGGE 324          
BLAST of jgi.p|Trimin1|180791 vs. uniprot
Match: A0A836CPH7_9STRA (PCNA_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPH7_9STRA)

HSP 1 Score: 331 bits (848), Expect = 1.310e-108
Identity = 175/287 (60.98%), Postives = 211/287 (73.52%), Query Frame = 0
Query:   43 EVPEGTVVCMRTHHTQQWRTLIDALKDLIPESPVTFGASGMKLISMDPAHVALINLQVCSEFYYCKRETTVGLNVAALYRMLRNLTTGGYLLEINLLESDPDHLSILVNNEEKRTRTSNRLKLLRLPEEIITIPPTVFQRVLSIPSADFQRYIRELSGVSNKISIRSTKDMLLLSASGTMGTTEIEVRPTASGMHWQHIE-------------------------SAASDEEEEAVEGVYLAKYLERFSRPLDPVVEIFMRPAYPLVLRYSMSTAVVRLVIAQCARE 304
            +VP GT+V +RT H+QQWRTL DALKDL+PE PVTFGA G+KL+SMDP  +ALI   +            VGLNVAALYRMLRNLTTGGY+LE+++ ES PD +S++V+N EKR RT + LKLLRLPEEIITIPP VFQRVLSIPSADFQRY+RELSGVSN+I +RS++D L LSA+G  G TEIE+RPTASGMHWQ IE                         S  +  E+  ++GV+L+KYLERFSRPLD +VEIF++  YPLVLRY+M T VVRLV+AQC  E
Sbjct:  120 DVPLGTLVLLRTSHSQQWRTLADALKDLVPECPVTFGADGLKLVSMDPGMIALICWLM------------VGLNVAALYRMLRNLTTGGYILELSIHESTPDRMSVVVSNGEKRVRTCHSLKLLRLPEEIITIPPAVFQRVLSIPSADFQRYVRELSGVSNRIRVRSSRDRLTLSATGVAGLTEIEIRPTASGMHWQFIEPXXXXXXXXXADDAPEXXXXXXXGASPPAAVEDPGIDGVFLSKYLERFSRPLDSIVEIFLKRDYPLVLRYTMQTTVVRLVVAQCEDE 394          
BLAST of jgi.p|Trimin1|180791 vs. uniprot
Match: A0A836CHQ2_9STRA (Proliferating cell nuclear antigen n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHQ2_9STRA)

HSP 1 Score: 319 bits (817), Expect = 1.250e-105
Identity = 160/260 (61.54%), Postives = 201/260 (77.31%), Query Frame = 0
Query:   49 VVCMRTHHTQQWRTLIDALKDLIPESPVTFGASGMKLISMDPAHVALINLQVCSEFYYCKRETTVGLNVAALYRMLRNLTTGGYLLEINLLESDPDHLSILVNNEEKRTRTSNRLKLLRLPEEIITIPPTVFQRVLSIPSADFQRYIRELSGVSNKISIRSTKDMLLLSASGTMGTTEIEVRPTASGMHWQHIESAASDEE--EEAVEGVYLAKYLERFSRPLDPVVEIFMRPAYPLVLRYSMSTAVVRLVIAQCAREEG 306
            ++CMR+  T QWR L+D LKDLI E P++F   GMKLIS+DP  VAL++LQ  SEFYYCK E TVG+N+ ALY+MLRNLTTGGY+LE ++   + D LSI + N +KRT TSN+LKLL+LP+E + IP T FQRVLSIPSAD QR++REL+ +SNKI I+ST D L+LSA GTMG++EI +RPTASGMHW  I++    E   +  VEGVY +K+LERFSRPLDP+ EIF++  YPLVLRY +STA VRLVIA    +EG
Sbjct:   36 ILCMRSSQTSQWRLLVDFLKDLITECPISFSQDGMKLISLDPIKVALLHLQAKSEFYYCKSEITVGMNITALYKMLRNLTTGGYMLEFSMSSKEMDVLSIQLINSDKRTCTSNKLKLLKLPQETLIIPSTNFQRVLSIPSADLQRHVRELAALSNKIKIKSTADQLILSAEGTMGSSEIVIRPTASGMHWISIDNNQESEGGGDAVVEGVYFSKFLERFSRPLDPICEIFVKQNYPLVLRYVLSTATVRLVIAPVQEDEG 295          
BLAST of jgi.p|Trimin1|180791 vs. uniprot
Match: A0A835Z7L8_9STRA (Proliferating cell nuclear antigen n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7L8_9STRA)

HSP 1 Score: 308 bits (788), Expect = 3.330e-101
Identity = 155/250 (62.00%), Postives = 194/250 (77.60%), Query Frame = 0
Query:   59 QWRTLIDALKDLIPESPVTFGASGMKLISMDPAHVALINLQVCSEFYYCKRETTVGLNVAALYRMLRNLTTGGYLLEINLLESDPDHLSILVNNEEKRTRTSNRLKLLRLPEEIITIPPTVFQRVLSIPSADFQRYIRELSGVSNKISIRSTKDMLLLSASGTMGTTEIEVRPTASGMHWQHIESAASDEE--EEAVEGVYLAKYLERFSRPLDPVVEIFMRPAYPLVLRYSMSTAVVRLVIAQCAREEG 306
            QWR L+D LKDLI E P++F   GMKLIS+DP  VAL++LQ  SEFYYCK E T+G+N+ ALY+MLRNLTTGGY+LE ++   + D LSI + N +KRT TSN+LKLL+LP+E + IP T FQRVLSIPSAD QR++REL+ +SNKI I+ST D L+LSA GTMG++EI +RPTASGMHW  I++    E   +  VEGVY +K+LERFSRPLDP+ EIF++  YPLVLRY +STA VRLVIA    +EG
Sbjct:   48 QWRLLVDFLKDLITECPISFNQDGMKLISLDPIKVALLHLQAKSEFYYCKSEITIGMNITALYKMLRNLTTGGYMLEFSMSSKEMDVLSIQLINSDKRTCTSNKLKLLKLPQETLIIPSTNFQRVLSIPSADLQRHVRELAALSNKIKIKSTADQLILSAEGTMGSSEIVIRPTASGMHWISIDNNQESEGGGDAVVEGVYFSKFLERFSRPLDPICEIFVKQNYPLVLRYVLSTATVRLVIAPVQEDEG 297          
BLAST of jgi.p|Trimin1|180791 vs. uniprot
Match: A0A835Z2Q5_9STRA (Proliferating cell nuclear antigen n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Q5_9STRA)

HSP 1 Score: 260 bits (664), Expect = 1.050e-82
Identity = 122/257 (47.47%), Postives = 185/257 (71.98%), Query Frame = 0
Query:   43 EVPEGTVVCMRTHHTQQWRTLIDALKDLIPESPVTFGASGMKLISMDPAHVALINLQVCSEFYYCKRETTVGLNVAALYRMLRNLTTGGYLLEINLLESDPDHLSILVNNEEKRTRTSNRLKLLRLPEEIITIPPTVFQRVLSIPSADFQRYIRELSGVSNKISIRSTKDMLLLSASGTMGTTEIEVRPTASGMHWQHIESAASDEEEEAVEGVYLAKYLERFSRPLDPVVEIFMRPAYPLVLRYSMSTAVVRLVIA 299
            ++P   ++ MR+  T QWR++ D +KD+  E P  F   G+ +I++DP  +ALI+++  +EFYYCK    VG+NV  LYR+LRNLT+ GY+LEI++ +++ D + + + N +KR+   N++KLLRLP+E+ITIP T F RVLSIPS+D QRYIRELS +S+KI++ ST+D L LSA G +G++EI VRPT+SG+H+   ++   DE    V   + ++YLE+  RP+D   E+F++  YPLVLRY+++TA +R+VIA
Sbjct:   20 DLPADCILMMRSTQTSQWRSIFDFVKDVTTEVPFKFDTEGLSIITLDPLKIALISVRAVTEFYYCKAPLNVGINVTVLYRLLRNLTSAGYVLEISMFQNETDVIHVQITNRDKRSVVRNKIKLLRLPDEVITIPSTTFDRVLSIPSSDLQRYIRELSSLSSKITVSSTRDELTLSAQGALGSSEITVRPTSSGVHFLFKDTEKHDE---VVSARFYSRYLEKLCRPIDSSTEVFLKKGYPLVLRYNLATATIRVVIA 273          
BLAST of jgi.p|Trimin1|180791 vs. uniprot
Match: B5LWG9_9PHYC (Putative PCNA n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWG9_9PHYC)

HSP 1 Score: 177 bits (450), Expect = 1.850e-50
Identity = 95/254 (37.40%), Postives = 164/254 (64.57%), Query Frame = 0
Query:   49 VVCMRTHHTQQWRTLIDALKDLIPESPVTFGAS-GMKLISMDPAHVALINLQVCS-EFYYCKRETTVGLNVAALYRMLRNLTTGGYLLEINLLESDPDHLSILVNNEEKRTRTSNRLKLLRLPEEIITIPPTVFQRVLSIPSADFQRYIRELSGVSNKISIRSTKDMLLLSASGTMGTTEIEVRPTASGMHWQHIESAASDEEEEAVEGVYLAKYLERFSRP-LDPVVEIFMRPAYPLVLRYSMSTAVVRLVIA 299
            +  MRT    Q+++L + LK+L+ +  + F  + G++L+S+DP  VA+++L V S E++Y K   T G+N+A LYRM+R+L++G Y+ E  + E +P  ++I + N ++RTRT + +KLL L E  I+IP   + RV+S+PS++  +++RE+  VSN +++R T+  L   A G M ++ I + PTASG++W+  E          +EG ++ +YLE+F R  ++  VE+F++  +PL+LRY +S   +R VIA
Sbjct:   36 IFLMRTSQCAQFKSLCECLKELLTDVNMEFIENKGIRLVSIDPGRVAMVHLVVNSVEYFYVKGTVTAGMNMAFLYRMIRSLSSGDYM-EWRIYEDNPHAMNIELYNSDRRTRTVSSMKLLDLDEVEISIPNVEYDRVVSMPSSELSKHVREMVAVSNFVTVRGTRSTLEFIAEGEMASSHITIHPTASGLNWKFSEDVGD------IEGKFVVRYLEKFGRVGVEANVELFLKTDFPLILRYELSIGTLRFVIA 282          
BLAST of jgi.p|Trimin1|180791 vs. uniprot
Match: Q6XM81_9PHYC (FirrV-1-A6 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM81_9PHYC)

HSP 1 Score: 177 bits (448), Expect = 2.210e-50
Identity = 94/254 (37.01%), Postives = 164/254 (64.57%), Query Frame = 0
Query:   49 VVCMRTHHTQQWRTLIDALKDLIPESPVTF-GASGMKLISMDPAHVALINLQVCS-EFYYCKRETTVGLNVAALYRMLRNLTTGGYLLEINLLESDPDHLSILVNNEEKRTRTSNRLKLLRLPEEIITIPPTVFQRVLSIPSADFQRYIRELSGVSNKISIRSTKDMLLLSASGTMGTTEIEVRPTASGMHWQHIESAASDEEEEAVEGVYLAKYLERFSRP-LDPVVEIFMRPAYPLVLRYSMSTAVVRLVIA 299
            +  +RT  + Q++ L + LK+L+ +  + F    G++L+S+DP  VA+++L + S E++Y +   T GLN++ LYRM+R LT+G  + E  + E DP  + I + N ++RTRT + +KLL L E  I+IP   + R++S+PS++  +++RE+  VSN +++R+TK  L   A G M T+ I + PTASG++W++     SD+    +EG ++ +YLE+F R  ++  VE+F++  +PL+LRY ++   +R VIA
Sbjct:   16 IALLRTSQSTQFKNLCECLKELLTDVNLEFIQDKGIRLVSIDPGRVAMVHLVINSVEYFYAQGTVTAGLNMSFLYRMIRCLTSGDSM-EWRVFEDDPHTMHIELYNNDRRTRTVSSIKLLDLDEVDISIPEVEYDRIVSMPSSELSKHVREMIAVSNYVTVRTTKTTLQFIAEGDMATSHITIHPTASGLNWKY-----SDDVVGTIEGKFVVRYLEKFGRVGVEANVELFLKKNFPLILRYELTIGTLRFVIA 263          
BLAST of jgi.p|Trimin1|180791 vs. uniprot
Match: D8LPF8_ECTSI (Proliferating cell nuclear antigen n=2 Tax=root TaxID=1 RepID=D8LPF8_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 4.500e-50
Identity = 100/254 (39.37%), Postives = 161/254 (63.39%), Query Frame = 0
Query:   49 VVCMRTHHTQQWRTLIDALKDLIPESPVTF-GASGMKLISMDPAHVALINLQVCS-EFYYCKRETTVGLNVAALYRMLRNLTTGGYLLEINLLESDPDHLSILVNNEEKRTRTSNRLKLLRLPEEIITIPPTVFQRVLSIPSADFQRYIRELSGVSNKISIRSTKDMLLLSASGTMGTTEIEVRPTASGMHWQHIESAASDEEEEAVEGVYLAKYLERFSR-PLDPVVEIFMRPAYPLVLRYSMSTAVVRLVIA 299
            V+ M+T    Q+++LI+ LK+L+ E  + F    G++L+S+DP  VA+I+L V + E +Y K   T GLNV  LY+M+R++T+  ++ E  + E +P  + I ++N E+RT+T   +KLL L  E I IP   F RV+S+PS++  +++RE+  VS  ISIR+T+  L L + G M  + I + PTASG++W+H E        E +EG Y A+Y+E+F++  L   VE+F++  YPL+LR+ +S   +R  IA
Sbjct:   28 VLMMQTSQCLQFKSLIECLKELLCEVNMDFIEGKGIRLVSIDPGRVAMIHLVVNNIESFYAKGTVTAGLNVVVLYKMIRSMTSNDFM-EWRIYEDEPHRMEIELSNSERRTKTVTSIKLLDLDAEDIIIPQVEFDRVVSMPSSELSKHVREMVTVSPFISIRATQTTLELVSEGEMAKSHITIEPTASGLNWKHSEKG------EDIEGKYFARYIEKFTKNSLAINVELFLKANYPLILRFEISIGCLRFCIA 274          
BLAST of jgi.p|Trimin1|180791 vs. uniprot
Match: A0A6C0F6B6_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0F6B6_9ZZZZ)

HSP 1 Score: 144 bits (362), Expect = 1.200e-37
Identity = 76/247 (30.77%), Postives = 154/247 (62.35%), Query Frame = 0
Query:   49 VVCMRTHHTQQWRTLIDALKDLIPESPVTFGASGMKLISMDPAHVALINLQVCS---EFYYCKRETTVGLNVAALYRMLRNLTTGGYLLEINLLESDPDHLSILVNNEEKRTRTSNRLKLLRLPEEIITIPPTVFQRVLSIPSADFQRYIRELSGVSNKISIRSTKDMLLLSASGTMGTTEIEVRPTASGMHWQHIESAASDEEEEAVEGVYLAKYLERFSR--PLDPVVEIFMRPAYPLVLRYSMS 290
            ++ ++T  +  +R L++ALK+++ ++ + F  +G+K+++ D +   LI++++ +   E YYC  +T +GLN+  LY++++ +     +L + + +  P+ +SI +NN EK+++T  RL LL LP   I+IPP  F+  L++PS+DFQ+ IR+++ + +KI I+S+ + L+LS  G     E  +  T +G+ +     +   + EE ++GV+  KYL  F++   L  ++ ++++  YPLV+RY ++
Sbjct:    7 LLVVKTVQSGAFRVLVEALKEILTDTNLIFEPTGIKMMATDNSDTVLIHMKLEADKFEHYYCPEKTVIGLNMNNLYKLIKTMGNND-ILTMAIPKMSPNRISIKINNMEKQSQTIFRLNLLDLPHPEISIPPAKFETELTLPSSDFQKLIRDMTNIGDKIEIKSSGENLILSCEGDFAEQETVLSETQNGLSF-----SVKSKPEEPIQGVFSLKYLSLFTKCTNLCNLIHLYIKNDYPLVIRYDVA 247          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|180791 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z117_9STRA1.810e-213100.00Proliferating cell nuclear antigen n=3 Tax=Tribone... [more]
A0A835YX88_9STRA6.580e-14573.94Proliferating cell nuclear antigen n=1 Tax=Tribone... [more]
A0A836CPH7_9STRA1.310e-10860.98PCNA_C domain-containing protein n=1 Tax=Tribonema... [more]
A0A836CHQ2_9STRA1.250e-10561.54Proliferating cell nuclear antigen n=1 Tax=Tribone... [more]
A0A835Z7L8_9STRA3.330e-10162.00Proliferating cell nuclear antigen n=2 Tax=Tribone... [more]
A0A835Z2Q5_9STRA1.050e-8247.47Proliferating cell nuclear antigen n=1 Tax=Tribone... [more]
B5LWG9_9PHYC1.850e-5037.40Putative PCNA n=1 Tax=Feldmannia species virus Tax... [more]
Q6XM81_9PHYC2.210e-5037.01FirrV-1-A6 n=1 Tax=Feldmannia irregularis virus a ... [more]
D8LPF8_ECTSI4.500e-5039.37Proliferating cell nuclear antigen n=2 Tax=root Ta... [more]
A0A6C0F6B6_9ZZZZ1.200e-3730.77Uncharacterized protein n=1 Tax=viral metagenome T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000730Proliferating cell nuclear antigen, PCNAPRINTSPR00339PCNACYCLINcoord: 58..77
score: 22.38
coord: 253..267
score: 26.03
coord: 82..100
score: 44.36
coord: 157..179
score: 24.02
IPR000730Proliferating cell nuclear antigen, PCNATIGRFAMTIGR00590TIGR00590coord: 59..299
e-value: 9.7E-35
score: 118.2
IPR000730Proliferating cell nuclear antigen, PCNAPANTHERPTHR11352:SF0PROLIFERATING CELL NUCLEAR ANTIGENcoord: 56..299
IPR022649Proliferating cell nuclear antigen, PCNA, C-terminalPFAMPF02747PCNA_Ccoord: 175..295
e-value: 1.4E-15
score: 57.5
IPR022648Proliferating cell nuclear antigen, PCNA, N-terminalPFAMPF00705PCNA_Ncoord: 61..167
e-value: 8.8E-13
score: 48.1
NoneNo IPR availableGENE3D3.70.10.10coord: 48..305
e-value: 3.8E-43
score: 149.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availablePANTHERPTHR11352PROLIFERATING CELL NUCLEAR ANTIGENcoord: 56..299
NoneNo IPR availableCDDcd00577PCNAcoord: 60..299
e-value: 3.30816E-29
score: 110.026
NoneNo IPR availableSUPERFAMILY55979DNA clampcoord: 55..171
NoneNo IPR availableSUPERFAMILY55979DNA clampcoord: 175..299

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_228contigContig_228:140673..141605 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|180791mRNA_11536Tribonema minus UTEX_B_3156 mRNAContig_228 140673..141605 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|180791|e_gw1.228.48.1 ID=Trimin1|180791|e_gw1.228.48.1|Name=jgi.p|Trimin1|180791|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=311bp
MQKKKSKRPTKRKRSAKGAQSPPPVAAAEEPNADALALPSEPEVPEGTVV
CMRTHHTQQWRTLIDALKDLIPESPVTFGASGMKLISMDPAHVALINLQV
CSEFYYCKRETTVGLNVAALYRMLRNLTTGGYLLEINLLESDPDHLSILV
NNEEKRTRTSNRLKLLRLPEEIITIPPTVFQRVLSIPSADFQRYIRELSG
VSNKISIRSTKDMLLLSASGTMGTTEIEVRPTASGMHWQHIESAASDEEE
EAVEGVYLAKYLERFSRPLDPVVEIFMRPAYPLVLRYSMSTAVVRLVIAQ
CAREEGGGDE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000730Pr_cel_nuc_antig
IPR022649Pr_cel_nuc_antig_C
IPR022648Pr_cel_nuc_antig_N