Trimin1|180700|e_gw1.225.29.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|180700
Unique Name	Trimin1\|180700\|e_gw1.225.29.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	107

Homology

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BLAST of jgi.p|Trimin1|180700 vs. uniprot
Match: A0A836CH95_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH95_9STRA)

HSP 1 Score: 221 bits (564), Expect = 2.190e-73
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0

Query:    1 RKVVELVQVHGAQKWSQIAAQLPGRTGKQCRERWHNHLSPDINKAPFSAEEQRIILAQRRTLGNKWAEIAKHVPGRTDNSVKNHYNSSMKRKADIVFNDNEVYRML 106
            RKVVELVQVHGAQKWSQIAAQLPGRTGKQCRERWHNHLSPDINKAPFSAEEQRIILAQRRTLGNKWAEIAKHVPGRTDNSVKNHYNSSMKRKADIVFNDNEVYRML
Sbjct:    1 RKVVELVQVHGAQKWSQIAAQLPGRTGKQCRERWHNHLSPDINKAPFSAEEQRIILAQRRTLGNKWAEIAKHVPGRTDNSVKNHYNSSMKRKADIVFNDNEVYRML 106

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BLAST of jgi.p|Trimin1|180700 vs. uniprot
Match: F0Y971_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y971_AURAN)

HSP 1 Score: 141 bits (355), Expect = 1.130e-41
Identity = 63/94 (67.02%), Postives = 80/94 (85.11%), Query Frame = 0

Query:    1 RKVVELVQVHGAQKWSQIAAQLPGRTGKQCRERWHNHLSPDINKAPFSAEEQRIILAQRRTLGNKWAEIAKHVPGRTDNSVKNHYNSSMKRKAD 94
            +KV+ELV+ HGA+KWSQIA QLPGR  KQCRERWHNHL+P+I+KA ++ EE R IL+    LGN+WAEIAK +PGRTDN++KNH+NSS+KRK +
Sbjct:    1 QKVIELVKQHGARKWSQIAQQLPGRISKQCRERWHNHLNPEISKAAWTEEEDRKILSSHAKLGNRWAEIAKLLPGRTDNAIKNHWNSSIKRKYE 94

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BLAST of jgi.p|Trimin1|180700 vs. uniprot
Match: A0A7S4JCR9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JCR9_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.320e-41
Identity = 67/94 (71.28%), Postives = 82/94 (87.23%), Query Frame = 0

Query:    1 RKVVELVQVHGAQKWSQIAAQLPGRTGKQCRERWHNHLSPDINKAPFSAEEQRIILAQRRTLGNKWAEIAKHVPGRTDNSVKNHYNSSMKRKAD 94
            RKVVELV  HGA++WSQIAA+LPGR GKQCRERWHNHL+PDI+K P+  EE RII+    +LGN+WAE+AKH+PGRTDN++KNH+NSSMKRK +
Sbjct:  143 RKVVELVTAHGAKRWSQIAAELPGRIGKQCRERWHNHLNPDISKKPWMEEEDRIIIENHESLGNRWAEMAKHLPGRTDNAIKNHWNSSMKRKVE 236

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BLAST of jgi.p|Trimin1|180700 vs. uniprot
Match: A0A7S2UDC6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UDC6_9STRA)

HSP 1 Score: 153 bits (386), Expect = 4.800e-41
Identity = 68/94 (72.34%), Postives = 81/94 (86.17%), Query Frame = 0

Query:    1 RKVVELVQVHGAQKWSQIAAQLPGRTGKQCRERWHNHLSPDINKAPFSAEEQRIILAQRRTLGNKWAEIAKHVPGRTDNSVKNHYNSSMKRKAD 94
            RKV+ LV  HGA+KWSQIAA+LPGR GKQCRERWHNHL+PDI K+P+S EE RII+    +LGNKWAEIAK +PGRTDN++KNH+NSSMKRK +
Sbjct:  137 RKVISLVMTHGAKKWSQIAAELPGRIGKQCRERWHNHLNPDICKSPWSEEEDRIIIQSHESLGNKWAEIAKLLPGRTDNAIKNHWNSSMKRKVE 230

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BLAST of jgi.p|Trimin1|180700 vs. uniprot
Match: A0A1E7FEX6_9STRA (Ternary protein-Dna Complex1 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEX6_9STRA)

HSP 1 Score: 142 bits (357), Expect = 7.150e-41
Identity = 64/94 (68.09%), Postives = 77/94 (81.91%), Query Frame = 0

Query:    1 RKVVELVQVHGAQKWSQIAAQLPGRTGKQCRERWHNHLSPDINKAPFSAEEQRIILAQRRTLGNKWAEIAKHVPGRTDNSVKNHYNSSMKRKAD 94
            RKVVELV+ HGA+KWS IA  LPGR GKQCRERWHNHL+PDI+K  +  +E R IL    TLGN+WAEIAK +PGRTDN++KNH+NSSM+RK +
Sbjct:   85 RKVVELVKKHGAKKWSLIATNLPGRIGKQCRERWHNHLNPDISKEAWKEDEDRTILESHITLGNRWAEIAKMLPGRTDNAIKNHWNSSMRRKIE 178

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BLAST of jgi.p|Trimin1|180700 vs. uniprot
Match: B8CD10_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CD10_THAPS)

HSP 1 Score: 138 bits (348), Expect = 1.840e-40
Identity = 64/94 (68.09%), Postives = 80/94 (85.11%), Query Frame = 0

Query:    2 KVVELVQVHGAQKWSQIAAQLPGRTGKQCRERWHNHLSPDINKAPFSAEEQRIIL-AQRRTLGNKWAEIAKHVPGRTDNSVKNHYNSSMKRKAD 94
            KV ELV  +GA+KWSQIA +LPGR GKQCRERWHNHL+PDI K+P+S +E R+IL AQ+  +GN+WA+IAK + GRTDNS+KNH+NSSMKRK +
Sbjct:   11 KVRELVGKYGAKKWSQIAEELPGRIGKQCRERWHNHLNPDIKKSPWSEDEDRVILQAQKDGIGNRWADIAKMLNGRTDNSIKNHWNSSMKRKVE 104

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BLAST of jgi.p|Trimin1|180700 vs. uniprot
Match: D2UY60_NAEGR (Predicted protein (Fragment) n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2UY60_NAEGR)

HSP 1 Score: 138 bits (348), Expect = 2.280e-40
Identity = 61/93 (65.59%), Postives = 77/93 (82.80%), Query Frame = 0

Query:    2 KVVELVQVHGAQKWSQIAAQLPGRTGKQCRERWHNHLSPDINKAPFSAEEQRIILAQRRTLGNKWAEIAKHVPGRTDNSVKNHYNSSMKRKAD 94
            +VVELV+ +GA+KWS IA  LPGR GKQCRERWHNHL+PDINK P++ EE RII    +  GNKWA+IAK +PGRTDN++KNH+NS+M+RK +
Sbjct:   15 QVVELVKKYGAKKWSLIAQHLPGRIGKQCRERWHNHLNPDINKGPWTEEEDRIIYQAHKDYGNKWAQIAKLLPGRTDNAIKNHWNSTMRRKME 107

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BLAST of jgi.p|Trimin1|180700 vs. uniprot
Match: A0A1E7EJ97_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EJ97_9STRA)

HSP 1 Score: 135 bits (341), Expect = 2.810e-39
Identity = 63/94 (67.02%), Postives = 75/94 (79.79%), Query Frame = 0

Query:    1 RKVVELVQVHGAQKWSQIAAQLPGRTGKQCRERWHNHLSPDINKAPFSAEEQRIILAQRRTLGNKWAEIAKHVPGRTDNSVKNHYNSSMKRKAD 94
            RKVVELV+ HGA KWS IA  LPGR GKQCRERWHNHL+PDI+K  +  +E R IL    TLGN+W EIAK +PGRTDN++KNH+NSSM+RK +
Sbjct:   21 RKVVELVKKHGA-KWSLIATNLPGRIGKQCRERWHNHLNPDISKEAWKEDEDRTILESHITLGNRWTEIAKMLPGRTDNAIKNHWNSSMRRKIE 113

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BLAST of jgi.p|Trimin1|180700 vs. uniprot
Match: A0A6H5JPJ5_9PHAE (MYB protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPJ5_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 3.520e-39
Identity = 69/96 (71.88%), Postives = 80/96 (83.33%), Query Frame = 0

Query:    2 KVVELVQVHGAQKWSQIAAQLPGRTGKQCRERWHNHLSPDINKAPFSAEEQRIILAQRRTLGNKWAEIAKHVPGRTDNSVKNHYNSSMKRKADIVF 97
            +V ELV   GA+KWS IAAQLPGRTGKQCRERWHNHL+P I+K P+S  E   IL Q + LGNKWAEIAK +PGRTDN++KNH+NSSMKRKA+IVF
Sbjct:  179 RVAELVGQIGAKKWSCIAAQLPGRTGKQCRERWHNHLNPHISKVPWSEHEDHTILIQHQKLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKAEIVF 274

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BLAST of jgi.p|Trimin1|180700 vs. uniprot
Match: A0A7S2WMH6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WMH6_9STRA)

HSP 1 Score: 137 bits (345), Expect = 7.490e-39
Identity = 60/93 (64.52%), Postives = 76/93 (81.72%), Query Frame = 0

Query:    2 KVVELVQVHGAQKWSQIAAQLPGRTGKQCRERWHNHLSPDINKAPFSAEEQRIILAQRRTLGNKWAEIAKHVPGRTDNSVKNHYNSSMKRKAD 94
            KV+ELV++HG +KW+ IA  LPGR GKQCRERWHNHL+P I+K  +S +E R+IL     LGN+WAEIAK +PGRTDN++KNH+NSSMKRK +
Sbjct:   95 KVIELVKLHGPKKWTMIADCLPGRIGKQCRERWHNHLNPKISKLAWSEDEDRVILEAHEKLGNRWAEIAKRLPGRTDNAIKNHWNSSMKRKIE 187

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|180700 vs. uniprot

BLAST of jgi.p|Trimin1|180700 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CH95_9STRA	2.190e-73	100.00	Homeodomain-like protein n=1 Tax=Tribonema minus T...	[more]
F0Y971_AURAN	1.130e-41	67.02	Uncharacterized protein (Fragment) n=1 Tax=Aureoco...	[more]
A0A7S4JCR9_9STRA	1.320e-41	71.28	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]
A0A7S2UDC6_9STRA	4.800e-41	72.34	Hypothetical protein n=1 Tax=Attheya septentrional...	[more]
A0A1E7FEX6_9STRA	7.150e-41	68.09	Ternary protein-Dna Complex1 (Fragment) n=1 Tax=Fr...	[more]
B8CD10_THAPS	1.840e-40	68.09	Uncharacterized protein (Fragment) n=1 Tax=Thalass...	[more]
D2UY60_NAEGR	2.280e-40	65.59	Predicted protein (Fragment) n=1 Tax=Naegleria gru...	[more]
A0A1E7EJ97_9STRA	2.810e-39	67.02	Homeodomain-like protein (Fragment) n=1 Tax=Fragil...	[more]
A0A6H5JPJ5_9PHAE	3.520e-39	71.88	MYB protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0...	[more]
A0A7S2WMH6_9STRA	7.490e-39	64.52	Hypothetical protein (Fragment) n=1 Tax=Rhizochrom...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 1..40 e-value: 3.7E-5 score: 33.1 coord: 43..91 e-value: 3.6E-13 score: 59.8
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 39..89 score: 8.850057
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 1..38 score: 9.6397
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 46..86 e-value: 6.88982E-10 score: 48.3406
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 1..38 e-value: 6.27156E-11 score: 51.037
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 2..52 e-value: 4.6E-15 score: 55.6
None	No IPR available	GENE3D	1.10.10.60		coord: 1..43 e-value: 1.4E-18 score: 68.5
None	No IPR available	GENE3D	1.10.10.60		coord: 45..92 e-value: 2.1E-17 score: 64.7
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 2..92
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..42 score: 25.846315
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 43..93 score: 19.232576
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 18..95

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_225	contig	Contig_225:137179..139545 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|180700	mRNA_17683	Tribonema minus UTEX_B_3156	mRNA	Contig_225 137179..139545 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|180700|e_gw1.225.29.1 ID=Trimin1|180700|e_gw1.225.29.1|Name=jgi.p|Trimin1|180700|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=107bp
RKVVELVQVHGAQKWSQIAAQLPGRTGKQCRERWHNHLSPDINKAPFSAE
EQRIILAQRRTLGNKWAEIAKHVPGRTDNSVKNHYNSSMKRKADIVFNDN
EVYRML*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR017930	Myb_dom
IPR009057	Homeobox-like_sf