Trimin1|180321|e_gw1.214.35.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|180321
Unique Name	Trimin1\|180321\|e_gw1.214.35.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	194

Homology

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BLAST of jgi.p|Trimin1|180321 vs. uniprot
Match: A0A835Z4G6_9STRA (Calpain catalytic domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4G6_9STRA)

HSP 1 Score: 416 bits (1068), Expect = 2.060e-147
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0

Query:    1 MRGEKYQDPSFPVLSHPADCLYINANKPNSGIDVPAQWLRPTDLCSAPQLFIEGVNAGDIQQGTLGTCYLLGALASLSAHKGHLESIFVAHDFEAGVVAVRFFDHNSWKHVIIDDLIGCNADGAILYSHCKDANDFWLPLIEKAWVKLLGCYEQAQSGHEHHALMDLTGGQLLHYDAITSTALLCCHRDAPLY 193
            MRGEKYQDPSFPVLSHPADCLYINANKPNSGIDVPAQWLRPTDLCSAPQLFIEGVNAGDIQQGTLGTCYLLGALASLSAHKGHLESIFVAHDFEAGVVAVRFFDHNSWKHVIIDDLIGCNADGAILYSHCKDANDFWLPLIEKAWVKLLGCYEQAQSGHEHHALMDLTGGQLLHYDAITSTALLCCHRDAPLY
Sbjct:    1 MRGEKYQDPSFPVLSHPADCLYINANKPNSGIDVPAQWLRPTDLCSAPQLFIEGVNAGDIQQGTLGTCYLLGALASLSAHKGHLESIFVAHDFEAGVVAVRFFDHNSWKHVIIDDLIGCNADGAILYSHCKDANDFWLPLIEKAWVKLLGCYEQAQSGHEHHALMDLTGGQLLHYDAITSTALLCCHRDAPLY 193

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BLAST of jgi.p|Trimin1|180321 vs. uniprot
Match: A0A835Z6R8_9STRA (Calpain catalytic domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6R8_9STRA)

HSP 1 Score: 286 bits (731), Expect = 1.440e-95
Identity = 129/170 (75.88%), Postives = 145/170 (85.29%), Query Frame = 0

Query:    1 MRGEKYQDPSFPVLSHPADCLYINANKPNSGIDVPAQWLRPTDLCSAPQLFIEGVNAGDIQQGTLGTCYLLGALASLSAHKGHLESIFVAHDFEAGVVAVRFFDHNSWKHVIIDDLIGCNADGAILYSHCKDANDFWLPLIEKAWVKLLGCYEQAQSGHEHHALMDLTGG 170
            +RG KY DPSF VL++P  CL+INA+ PN  I +P +WLRPTDL S PQLF++GV AGDIQQG +GTCYLLGALASLSAH GHLESIFVAHDFEAGVVAVRFF+HNSWK+VIIDD+IGCN DG+I YSHCKD N+FWLPLIEKAW KL GCYE    GH HHALMD+TGG
Sbjct:   24 LRGTKYVDPSFSVLANPRGCLFINADNPNPEIPIPPKWLRPTDLSSDPQLFVDGVLAGDIQQGAVGTCYLLGALASLSAHTGHLESIFVAHDFEAGVVAVRFFNHNSWKYVIIDDIIGCNEDGSIAYSHCKDKNEFWLPLIEKAWAKLHGCYEYTHYGHTHHALMDMTGG 193

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BLAST of jgi.p|Trimin1|180321 vs. uniprot
Match: A0A835ZBB9_9STRA (Calpain catalytic domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBB9_9STRA)

HSP 1 Score: 290 bits (742), Expect = 1.560e-95
Identity = 134/169 (79.29%), Postives = 143/169 (84.62%), Query Frame = 0

Query:    2 RGEKYQDPSFPVLSHPADCLYINANKPNSGIDVPAQWLRPTDLCSAPQLFIEGVNAGDIQQGTLGTCYLLGALASLSAHKGHLESIFVAHDFEAGVVAVRFFDHNSWKHVIIDDLIGCNADGAILYSHCKDANDFWLPLIEKAWVKLLGCYEQAQSGHEHHALMDLTGG 170
            RGEKY+DP FPVL+ P  CLYIN   PN+ I  PAQWLRPTDL S PQ+F+EGV+AGDIQQG LGTCYLLGALA LSAHKGHLESIFVAHDFEAGVV VRFFDHN WK++IIDDLIGCN DG ILYSHCK  N+FWLPLIEKAW KL GCYEQ   G EHHALMDLTGG
Sbjct:   60 RGEKYEDPDFPVLADPERCLYIN--NPNAEIHAPAQWLRPTDLSSDPQMFVEGVHAGDIQQGVLGTCYLLGALAGLSAHKGHLESIFVAHDFEAGVVGVRFFDHNCWKYIIIDDLIGCNEDGRILYSHCKAENEFWLPLIEKAWAKLHGCYEQTSGGWEHHALMDLTGG 226

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BLAST of jgi.p|Trimin1|180321 vs. uniprot
Match: A0A835ZFZ2_9STRA (Calpain catalytic domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFZ2_9STRA)

HSP 1 Score: 275 bits (704), Expect = 4.290e-89
Identity = 127/171 (74.27%), Postives = 140/171 (81.87%), Query Frame = 0

Query:    2 RGEKYQD---PSFPVLSHPADCLYINANKPNSGIDVPAQWLRPTDLCSAPQLFIEGVNAGDIQQGTLGTCYLLGALASLSAHKGHLESIFVAHDFEAGVVAVRFFDHNSWKHVIIDDLIGCNADGAILYSHCKDANDFWLPLIEKAWVKLLGCYEQAQSGHEHHALMDLTG 169
            RGEKY+D   P FPVL+ P  CL+IN  KPN+   VP QWLRPTDL S PQ+F+EGV+AGDIQQG +GTCYLLGALA LSAHK HLESIFVAHDFEAGVVAVRFFDHN WK++II+DLIG N DG ILYSHCKD N+ WLPLIEKAW KL GCYE    GH HHALMD+TG
Sbjct:   13 RGEKYEDLSDPDFPVLADPESCLFINVEKPNADFPVPDQWLRPTDLSSNPQMFVEGVHAGDIQQGAIGTCYLLGALAGLSAHKRHLESIFVAHDFEAGVVAVRFFDHNCWKYIIINDLIGGNEDGNILYSHCKDKNEVWLPLIEKAWAKLHGCYEYTHFGHTHHALMDMTG 183

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BLAST of jgi.p|Trimin1|180321 vs. uniprot
Match: A0A836CIW9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIW9_9STRA)

HSP 1 Score: 209 bits (531), Expect = 4.710e-62
Identity = 89/168 (52.98%), Postives = 123/168 (73.21%), Query Frame = 0

Query:    3 GEKYQDPSFPVLSHPADCLYINANKPNSGIDVPAQWLRPTDLCSAPQLFIEGVNAGDIQQGTLGTCYLLGALASLSAHKGHLESIFVAHDFEAGVVAVRFFDHNSWKHVIIDDLIGCNADGAILYSHCKDANDFWLPLIEKAWVKLLGCYEQAQSGHEHHALMDLTGG 170
            G K+ D  FPV + PA CLY   +KP+     P+ W R +++   PQ+F++GV+AGDIQQG LG+CY LGALA+++AHK HLES+ +AHD + G+VAVRFF +N W+ VIIDD IG  +DG+ILY+ CKD ++FW+PL+EKA+ KL G +E    G  + A+MD+TGG
Sbjct:   88 GSKFTDVDFPVTTKPAKCLYTRRHKPSDEFPAPSMWKRSSEISERPQMFVDGVHAGDIQQGGLGSCYFLGALAAIAAHKEHLESLIIAHDLQVGIVAVRFFKNNKWQAVIIDDYIGLKSDGSILYASCKDQDEFWVPLLEKAYAKLHGSFESIDGGWTYQAIMDMTGG 255

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BLAST of jgi.p|Trimin1|180321 vs. uniprot
Match: A0A835YKV9_9STRA (Calpain catalytic domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKV9_9STRA)

HSP 1 Score: 203 bits (517), Expect = 5.950e-59
Identity = 89/168 (52.98%), Postives = 120/168 (71.43%), Query Frame = 0

Query:    3 GEKYQDPSFPVLSHPADCLYINANKPNSGIDVPAQWLRPTDLCSAPQLFIEGVNAGDIQQGTLGTCYLLGALASLSAHKGHLESIFVAHDFEAGVVAVRFFDHNSWKHVIIDDLIGCNADGAILYSHCKDANDFWLPLIEKAWVKLLGCYEQAQSGHEHHALMDLTGG 170
            G K+ D  FPV + P  CLY      N  I  P+ W R +++ + PQ+F++GV AGDIQQG LG+CY LGALA+++AHK HLES+ +AHDFEAG+VAVRFF +N W  VIIDD IG  +DG+ILY+ C D ++FW+PL+EKA+ KL G +E    G+ +  +MD+TGG
Sbjct:   81 GTKFTDAQFPVTTTPNKCLYTCRLMKNEEIPAPSMWKRASEISARPQMFVDGVAAGDIQQGALGSCYFLGALAAIAAHKAHLESLIIAHDFEAGIVAVRFFKNNLWHAVIIDDYIGLASDGSILYARCTDPDEFWVPLLEKAYAKLHGSFESINGGYNYQVIMDMTGG 248

[Close]

BLAST of jgi.p|Trimin1|180321 vs. uniprot
Match: A0A835Z8S4_9STRA (Calpain catalytic domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8S4_9STRA)

HSP 1 Score: 194 bits (492), Expect = 2.210e-56
Identity = 81/168 (48.21%), Postives = 119/168 (70.83%), Query Frame = 0

Query:    3 GEKYQDPSFPVLSHPADCLYINANKPNSGIDVPAQWLRPTDLCSAPQLFIEGVNAGDIQQGTLGTCYLLGALASLSAHKGHLESIFVAHDFEAGVVAVRFFDHNSWKHVIIDDLIGCNADGAILYSHCKDANDFWLPLIEKAWVKLLGCYEQAQSGHEHHALMDLTGG 170
            G K+ D  FPV + P  CLY   ++P+     P+ W R +++   PQ+F++GV+AGDI+QG LG+CY LGALA+++AHK HLES+ +AHDFE G+VA+RFF +N W+ +IIDD IG  +D  I ++ C D ++FW+PL+EKA+ KL G +E  + G  +  +MD+TGG
Sbjct:   84 GTKFTDADFPVTTKPTKCLYKFRHRPSEKFPAPSMWKRVSEISERPQMFVDGVHAGDIKQGYLGSCYFLGALAAIAAHKEHLESLIIAHDFEVGIVALRFFKNNKWQSLIIDDYIGLKSDNTIHFASCNDPDEFWVPLLEKAYAKLHGSFESIECGFGYQVIMDMTGG 251

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BLAST of jgi.p|Trimin1|180321 vs. uniprot
Match: A0A7S2QNW0_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2QNW0_9DINO)

HSP 1 Score: 142 bits (359), Expect = 4.010e-36
Identity = 66/171 (38.60%), Postives = 107/171 (62.57%), Query Frame = 0

Query:    3 GEKYQDPSFPVLSHPADCLYINANKPNSGIDV--PAQWLRPTDLCSAPQLFIEGVNAGDIQQGTLGTCYLLGALASLSAHKGH-LESIFVAHDFEAGVVAVRFFDHNSWKHVIIDDLIGCNADGAILYSHCKDANDFWLPLIEKAWVKLLGCYEQAQSGHEHHALMDLTGG 170
            GE++ DP + V  +P + LY++   P     V  PA + R +++ + P+LF  GV+AGDI+QG +GTC+LLGAL +++A+K   ++  F+ +D +AGV  VRF     W+HVI+DDL+  +  G ++Y+   D  + W+P++EKA+ KL  CYE    G  + A+  + GG
Sbjct:  142 GERFVDPGWDVTKNPYEVLYVDKQGPGHDCTVGAPAAYKRLSEVVANPRLFKGGVHAGDIKQGQIGTCFLLGALGAIAANKEEAIKKAFIKYDMQAGVYGVRFCVDGEWEHVIVDDLMPVDQYGRLMYARSADPEELWVPILEKAYCKLNTCYEMCDGGRPNQAIYHICGG 312

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BLAST of jgi.p|Trimin1|180321 vs. uniprot
Match: A0A7S1RKC7_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RKC7_ALECA)

HSP 1 Score: 135 bits (339), Expect = 1.570e-33
Identity = 63/171 (36.84%), Postives = 101/171 (59.06%), Query Frame = 0

Query:    3 GEKYQDPSFPVLSHPADCLYINANKPNSGIDV--PAQWLRPTDLCSAPQLFIEGVNAGDIQQGTLGTCYLLGALASLSAHKGH-LESIFVAHDFEAGVVAVRFFDHNSWKHVIIDDLIGCNADGAILYSHCKDANDFWLPLIEKAWVKLLGCYEQAQSGHEHHALMDLTGG 170
            G ++ DP++ + + P   LY++  KP     V  PA + R ++L   PQLF  G+ AGDI QG +GTC+LLGA+ ++++H  H ++ +F+ +D + GV  VRF     W + ++DD +  +  G +LY+  KD ++ W PL+EKA+ KL  CYE    G    A+ +  GG
Sbjct:   70 GTQFTDPAWDMTTAPEAVLYVDKEKPGWDCTVGEPAGYKRLSELIQEPQLFKGGIRAGDIIQGRIGTCFLLGAMGAVASHSPHAVKKMFIKYDMKVGVYGVRFCLDGEWTYTVVDDWMPVDGSGRLLYARSKDPDEVWCPLLEKAYCKLHTCYEMCDGGWSTEAIFNFFGG 240

[Close]

BLAST of jgi.p|Trimin1|180321 vs. uniprot
Match: A0A7S0FWJ4_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0FWJ4_9DINO)

HSP 1 Score: 134 bits (338), Expect = 4.400e-33
Identity = 70/194 (36.08%), Postives = 104/194 (53.61%), Query Frame = 0

Query:    3 GEKYQDPSFPVLSHPADCLYINANKPNSGIDV--PAQWLRPTDLCSA-----------------------PQLFIEGVNAGDIQQGTLGTCYLLGALASLSAHKGH-LESIFVAHDFEAGVVAVRFFDHNSWKHVIIDDLIGCNADGAILYSHCKDANDFWLPLIEKAWVKLLGCYEQAQSGHEHHALMDLTGG 170
            G K+ DP + V S P + LY++  +P     V  PA+W R TD+  A                       P LF  G+ AGDI QG +GTC+LLGA+ ++++     ++ +F+ +D +AGV  +RF     W +VI+DD +  + DG ILY+H KDA + W+ L+EKA+ KL  CYE    G    A+  + GG
Sbjct:  263 GTKFTDPEWNVRSSPTEVLYVDKERPGWDCTVGKPARWKRLTDIAKASGTGSALNSLFGSFASGPKKKIKPALFKGGIKAGDIVQGNIGTCFLLGAMGAIASDSDEAIQRMFIRYDVDAGVYGLRFNVDGEWDYVIVDDYMPVDYDGNILYAHSKDAEEVWVALLEKAFCKLHTCYEMCDGGMSREAIACMLGG 456

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|180321 vs. uniprot

BLAST of jgi.p|Trimin1|180321 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835Z4G6_9STRA	2.060e-147	100.00	Calpain catalytic domain-containing protein n=1 Ta...	[more]
A0A835Z6R8_9STRA	1.440e-95	75.88	Calpain catalytic domain-containing protein n=1 Ta...	[more]
A0A835ZBB9_9STRA	1.560e-95	79.29	Calpain catalytic domain-containing protein n=1 Ta...	[more]
A0A835ZFZ2_9STRA	4.290e-89	74.27	Calpain catalytic domain-containing protein n=1 Ta...	[more]
A0A836CIW9_9STRA	4.710e-62	52.98	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YKV9_9STRA	5.950e-59	52.98	Calpain catalytic domain-containing protein n=1 Ta...	[more]
A0A835Z8S4_9STRA	2.210e-56	48.21	Calpain catalytic domain-containing protein n=2 Ta...	[more]
A0A7S2QNW0_9DINO	4.010e-36	38.60	Hypothetical protein n=1 Tax=Brandtodinium nutricu...	[more]
A0A7S1RKC7_ALECA	1.570e-33	36.84	Hypothetical protein n=1 Tax=Alexandrium catenella...	[more]
A0A7S0FWJ4_9DINO	4.400e-33	36.08	Hypothetical protein n=1 Tax=Pyrodinium bahamense ...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022684	Peptidase C2, calpain family	PRINTS	PR00704	CALPAIN	coord: 38..60 score: 42.61 coord: 62..78 score: 56.27 coord: 125..148 score: 40.28 coord: 150..177 score: 35.48
IPR001300	Peptidase C2, calpain, catalytic domain	SMART	SM00230	cys_prot_2	coord: 2..193 e-value: 8.0E-7 score: -80.0
IPR001300	Peptidase C2, calpain, catalytic domain	PFAM	PF00648	Peptidase_C2	coord: 6..177 e-value: 1.2E-42 score: 146.0
IPR001300	Peptidase C2, calpain, catalytic domain	PROSITE	PS50203	CALPAIN_CAT	coord: 5..193 score: 27.799782
None	No IPR available	PIRSR	PIRSR629539-1	PIRSR629539-1	coord: 3..176 e-value: 4.8E-31 score: 105.5
None	No IPR available	PANTHER	PTHR10183	CALPAIN	coord: 3..170
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 2..176

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_214	contig	Contig_214:59294..62240 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|180321	mRNA_17818	Tribonema minus UTEX_B_3156	mRNA	Contig_214 59294..62240 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|180321|e_gw1.214.35.1 ID=Trimin1|180321|e_gw1.214.35.1|Name=jgi.p|Trimin1|180321|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=194bp
MRGEKYQDPSFPVLSHPADCLYINANKPNSGIDVPAQWLRPTDLCSAPQL
FIEGVNAGDIQQGTLGTCYLLGALASLSAHKGHLESIFVAHDFEAGVVAV
RFFDHNSWKHVIIDDLIGCNADGAILYSHCKDANDFWLPLIEKAWVKLLG
CYEQAQSGHEHHALMDLTGGQLLHYDAITSTALLCCHRDAPLY*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022684	Calpain_cysteine_protease
IPR001300	Peptidase_C2_calpain_cat
IPR038765	Papain-like_cys_pep_sf