Trimin1|180191|e_gw1.210.55.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|180191
Unique NameTrimin1|180191|e_gw1.210.55.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length155
Homology
BLAST of jgi.p|Trimin1|180191 vs. uniprot
Match: A0A835Z162_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z162_9STRA)

HSP 1 Score: 314 bits (804), Expect = 2.010e-108
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
Query:    1 MAATYGYRQHDHHRLEEQQQYDYQQQPQTRRSSEAQQTKIVGNGAKRWNTGEIVSFFNDLLQLDSADAASEPLANIKESSSGCYALQVLDAMYPGCFRLKDCVWGKRDEVLPYEIANNYRILLGGLQKAGVPHSIDMEGVTAGRASCVLEFNQWL 155
            MAATYGYRQHDHHRLEEQQQYDYQQQPQTRRSSEAQQTKIVGNGAKRWNTGEIVSFFNDLLQLDSADAASEPLANIKESSSGCYALQVLDAMYPGCFRLKDCVWGKRDEVLPYEIANNYRILLGGLQKAGVPHSIDMEGVTAGRASCVLEFNQWL
Sbjct:    1 MAATYGYRQHDHHRLEEQQQYDYQQQPQTRRSSEAQQTKIVGNGAKRWNTGEIVSFFNDLLQLDSADAASEPLANIKESSSGCYALQVLDAMYPGCFRLKDCVWGKRDEVLPYEIANNYRILLGGLQKAGVPHSIDMEGVTAGRASCVLEFNQWL 155          
BLAST of jgi.p|Trimin1|180191 vs. uniprot
Match: A0A836CQU4_9STRA (Putative microtubule associated protein EB1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQU4_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.560e-7
Identity = 34/103 (33.01%), Postives = 53/103 (51.46%), Query Frame = 0
Query:   52 EIVSFFNDLLQLDSADAASEPLANIKESSSGCYALQVLDAMYPGCFRLKDCVWGKRDEVLPYEIANNYRILLGGLQKAGVPHSIDMEGVTAGRASCVLEFNQW 154
            EI+ + N  L L+        L+ I+E++SGC ALQ++DA YPG   ++   W  R++   YE   NY++L     K  V   I ++ +   +    LEF QW
Sbjct:   18 EILEWLNGTLSLN--------LSKIEETASGCVALQLMDACYPGQVSIQKLNWSARND---YEFIQNYKLLQTAFDKFHVDKHIPVDKIVRAKYQDNLEFMQW 109          
BLAST of jgi.p|Trimin1|180191 vs. uniprot
Match: A0A7S4AT87_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AT87_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 3.440e-7
Identity = 35/104 (33.65%), Postives = 53/104 (50.96%), Query Frame = 0
Query:   52 EIVSFFNDLLQLDSADAASEPLANIKESSSGCYALQVLDAMYPGCFRLKDCVWGKRDEVLPYEIANNYRILLGGLQKAGVPHSIDMEGVTAGRASCVLEFNQWL 155
            E++SFFNDLL L+        LA I+++++G  A Q+ D ++PG   L    W  R +   YE   NY++L     K  V   +D+  +   +    LEF QWL
Sbjct:   22 ELLSFFNDLLDLN--------LAKIEQTATGAVACQLTDYIFPGTVPLSRINWEARSD---YEFVANYKLLQAAFTKHRVQRYVDVTKLIRAKYQDNLEFCQWL 114          
BLAST of jgi.p|Trimin1|180191 vs. uniprot
Match: A0A7S4AT91_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AT91_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 4.370e-5
Identity = 29/86 (33.72%), Postives = 45/86 (52.33%), Query Frame = 0
Query:   52 EIVSFFNDLLQLDSADAASEPLANIKESSSGCYALQVLDAMYPGCFRLKDCVWGKRDEVLPYEIANNYRILLGGLQKAGVPHSIDM 137
            E++SFFNDLL L+        LA I+++++G  A Q+ D ++PG   L    W  R +   YE   NY++L     K  V   +D+
Sbjct:   22 ELLSFFNDLLDLN--------LAKIEQTATGAVACQLTDYIFPGTVPLSRINWEARSD---YEFVANYKLLQAAFTKHRVQRYVDV 96          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|180191 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835Z162_9STRA2.010e-108100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836CQU4_9STRA1.560e-733.01Putative microtubule associated protein EB1 n=1 Ta... [more]
A0A7S4AT87_9STRA3.440e-733.65Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S4AT91_9STRA4.370e-533.72Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036872CH domain superfamilyGENE3D1.10.418.10coord: 34..155
e-value: 2.5E-14
score: 55.6
IPR036872CH domain superfamilySUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 50..155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_210contigContig_210:68836..69300 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|180191mRNA_15909Tribonema minus UTEX_B_3156 mRNAContig_210 68836..69300 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|180191|e_gw1.210.55.1 ID=Trimin1|180191|e_gw1.210.55.1|Name=jgi.p|Trimin1|180191|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=155bp
MAATYGYRQHDHHRLEEQQQYDYQQQPQTRRSSEAQQTKIVGNGAKRWNT
GEIVSFFNDLLQLDSADAASEPLANIKESSSGCYALQVLDAMYPGCFRLK
DCVWGKRDEVLPYEIANNYRILLGGLQKAGVPHSIDMEGVTAGRASCVLE
FNQWL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036872CH_dom_sf