Trimin1|17749|CE17748_106 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|17749
Unique Name	Trimin1\|17749\|CE17748_106
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	327

Homology

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BLAST of jgi.p|Trimin1|17749 vs. uniprot
Match: A0A836CLT7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLT7_9STRA)

HSP 1 Score: 617 bits (1592), Expect = 7.740e-223
Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0

Query:    1 MDPCCQKEAIANRKMGKLMDALRKEDRVAKAEQRRKVIAGSLAPHELPSLDDDYPALVQARLQAAEKAPPEATASTAPQRGPASDSGDSXXXXXXXHLLDELELEPEGLRLRQAHMEAAAQQLKEMQQRAAYGYGQHQAVHEADLPHIVQRLPRVIVHFYCADSAACAALDLLLERAAQEWPGTRFVRARAPPGGPLADRLGLRHARGGALLAFKDGASVAQATDFRQFGGPDSVDPGAVHQWLQHSGALERTPLPLDALNAAMGGQSLADEEAYSSGGEEEGGGARYDCGRSGCNKPFAHQHVGANGGGAAPGALVAPGVGQLRA 326
            MDPCCQKEAIANRKMGKLMDALRKEDRVAKAEQRRKVIAGSLAPHELPSLDDDYPALVQARLQAAEKAPPEATASTAPQRGPASDSGDSXXXXXXXHLLDELELEPEGLRLRQAHMEAAAQQLKEMQQRAAYGYGQHQAVHEADLPHIVQRLPRVIVHFYCADSAACAALDLLLERAAQEWPGTRFVRARAPPGGPLADRLGLRHARGGALLAFKDGASVAQATDFRQFGGPDSVDPGAVHQWLQHSGALERTPLPLDALNAAMGGQSLADEEAYSSGGEEEGGGARYDCGRSGCNKPFAHQHVGANGGGAAPGALVAPGVGQLRA
Sbjct:    1 MDPCCQKEAIANRKMGKLMDALRKEDRVAKAEQRRKVIAGSLAPHELPSLDDDYPALVQARLQAAEKAPPEATASTAPQRGPASDSGDSXXXXXXXHLLDELELEPEGLRLRQAHMEAAAQQLKEMQQRAAYGYGQHQAVHEADLPHIVQRLPRVIVHFYCADSAACAALDLLLERAAQEWPGTRFVRARAPPGGPLADRLGLRHARGGALLAFKDGASVAQATDFRQFGGPDSVDPGAVHQWLQHSGALERTPLPLDALNAAMGGQSLADEEAYSSGGEEEGGGARYDCGRSGCNKPFAHQHVGANGGGAAPGALVAPGVGQLRA 326

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BLAST of jgi.p|Trimin1|17749 vs. uniprot
Match: A0A6S8SQX8_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8SQX8_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 4.900e-10
Identity = 98/356 (27.53%), Postives = 155/356 (43.54%), Query Frame = 0

Query:    1 MDPCCQKEAIANRKMGKLMDALRKEDRVAKAEQRRKVI-------AGSLAPHELPSLDD-DYPALVQARLQA---AEKAPPEATASTAPQRGPASDSGDSXXXXXXXHLLDELELEPE----GLRLRQAHMEAAAQQLK--EMQQRAA--YGYGQHQAVHEADLPHIV---------QRL----PRVIVHFYCADSAACAALDLLLERAAQEWPGTRFVRARAPPGGPLADRLGLRHARGG----------ALLAFKDGASVAQATDFRQFGGPDS--VDPGAVHQWLQHSGALER-TPLPLDALNAAMGGQSLADEEAYSSGGEEEGGGAR------YDCGRSGCNKPFAHQHVG 305
            ++ CCQ+E  +NRK+  +   LR+ DR+A AE+RR+ +       +G    ++ P++D  +Y AL++ +      +E+   EA  +   ++   S+  DS       +LLDE    P     G     AH +   ++L+   M   +A  +G+G H+ +H   + H            R     P  I+H Y  +S   A+LD+ LE+  +E+ GT++VRA    GG     +    AR            AL+A +DG  VA        G   +  V+P AV  WL ++  L R  PL  +        +    E        E+   A       Y+CG  GC K F HQHVG
Sbjct:   23 LESCCQREIESNRKLNAVETTLRRHDRIALAERRRRNVIDDLKFGSGCRCCYD-PNMDGGEYIALIEMKASVGTLSEQVCNEAQLNLKTEQ--ESNESDSDDDSEFDYLLDEDLPVPGTAGGGDNALMAHHQDRVKELQLFMMMNESAREHGFGVHRQLHPERVLHAAGLGMGGVRGNRAAAIPPAAIIHLYDPESTMSASLDVCLEKLGEEYRGTKYVRA----GGRATLTMNEDLARESLPKLTRDTLPALIAVRDGVVVACCPQLSSLGDARAGKVEPHAVEAWLDNARVLLREVPLEFEDYCRIRPEEDALLENMM----REKAKLAELPPENIYNCGVKGCCKTFRHQHVG 367

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|17749 vs. uniprot

BLAST of jgi.p|Trimin1|17749 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A836CLT7_9STRA	7.740e-223	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6S8SQX8_9STRA	4.900e-10	27.53	Hypothetical protein n=2 Tax=Chaetoceros debilis T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 109..129
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 127..254 e-value: 2.3E-11 score: 45.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..102
None	No IPR available	PANTHER	PTHR21148:SF25	PHOSDUCIN-LIKE PROTEIN 1	coord: 64..252
IPR045037	Phosducin-like	PANTHER	PTHR21148	THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9	coord: 64..252
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 85..251

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_134	contig	Contig_134:65592..69504 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|17749	mRNA_12300	Tribonema minus UTEX_B_3156	mRNA	Contig_134 65459..69549 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|17749|CE17748_106 ID=Trimin1|17749|CE17748_106|Name=jgi.p|Trimin1|17749|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=327bp
MDPCCQKEAIANRKMGKLMDALRKEDRVAKAEQRRKVIAGSLAPHELPSL
DDDYPALVQARLQAAEKAPPEATASTAPQRGPASDSGDSDSDSDYDHLLD
ELELEPEGLRLRQAHMEAAAQQLKEMQQRAAYGYGQHQAVHEADLPHIVQ
RLPRVIVHFYCADSAACAALDLLLERAAQEWPGTRFVRARAPPGGPLADR
LGLRHARGGALLAFKDGASVAQATDFRQFGGPDSVDPGAVHQWLQHSGAL
ERTPLPLDALNAAMGGQSLADEEAYSSGGEEEGGGARYDCGRSGCNKPFA
HQHVGANGGGAAPGALVAPGVGQLRA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR045037	PhLP
IPR036249	Thioredoxin-like_sf