Trimin1|177437|e_gw1.151.62.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|177437
Unique NameTrimin1|177437|e_gw1.151.62.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length70
Homology
BLAST of jgi.p|Trimin1|177437 vs. uniprot
Match: A0A835Z9A7_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9A7_9STRA)

HSP 1 Score: 137 bits (344), Expect = 5.720e-41
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
Query:    1 MVSIVGGEGPPAEYALHSGRVGGATAMMIAGRSDTEIMKAGRWKSAVFRTYIRLSPEMENASSALVPGS 69
            MVSIVGGEGPPAEYALHSGRVGGATAMMIAGRSDTEIMKAGRWKSAVFRTYIRLSPEMENASSALVPGS
Sbjct:    1 MVSIVGGEGPPAEYALHSGRVGGATAMMIAGRSDTEIMKAGRWKSAVFRTYIRLSPEMENASSALVPGS 69          
BLAST of jgi.p|Trimin1|177437 vs. uniprot
Match: A0A6H5KN32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN32_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 6.410e-9
Identity = 27/59 (45.76%), Postives = 35/59 (59.32%), Query Frame = 0
Query:   11 PAEYALHSGRVGGATAMMIAGRSDTEIMKAGRWKSAVFRTYIRLSPEMENASSALVPGS 69
            P  +ALHSGR+GGAT +   G S  +I +AGRWKS  F TY+R   +  N  S  +  S
Sbjct:   59 PTHFALHSGRIGGATQLAKQGASVVQIQRAGRWKSGAFMTYVRAGGDGANCVSRALASS 117          
BLAST of jgi.p|Trimin1|177437 vs. uniprot
Match: A0A6H5K8A0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8A0_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 7.630e-8
Identity = 28/57 (49.12%), Postives = 37/57 (64.91%), Query Frame = 0
Query:    1 MVSIVGGEGPPAEYALHSGRVGGATAMMIAGRSDTEIMKAGRWKSAVFRTYIRLSPE 57
            +VS  G +  P +YALHSGR+GGAT +   G S  +I +AGRWKS+ F  Y+R   E
Sbjct:  138 LVSAAGRD--PQKYALHSGRIGGATHLASMGASVIQIQRAGRWKSSAFMVYVRAGGE 192          
BLAST of jgi.p|Trimin1|177437 vs. uniprot
Match: A0A6H5KZQ1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZQ1_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 9.890e-7
Identity = 24/50 (48.00%), Postives = 30/50 (60.00%), Query Frame = 0
Query:   11 PAEYALHSGRVGGATAMMIAGRSDTEIMKAGRWKSAVFRTYIRLSPEMEN 60
            P  +ALHSGR+GGAT +   G S  +I + GRWKS    TY+R   E  N
Sbjct:  282 PTHFALHSGRIGGATQLAKQGASGVQIQRVGRWKSGAIMTYVRAGGEGAN 331          
BLAST of jgi.p|Trimin1|177437 vs. uniprot
Match: A0A662XNI5_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XNI5_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 1.700e-6
Identity = 27/60 (45.00%), Postives = 38/60 (63.33%), Query Frame = 0
Query:   11 PAEYALHSGRVGGATAMMIAGRSDTEIMKAGRWKSAVFRTYIRLSPEM-ENASSALVPGS 69
            P +++ HS R+GGA A+M AG+SD  I   GRW S  F  Y RL P M  +A+S+++  S
Sbjct:  209 PNDFSCHSLRIGGACALMAAGKSDLVIRLMGRWSSWCFSVYTRLKPGMVRDAASSMIKAS 268          
BLAST of jgi.p|Trimin1|177437 vs. uniprot
Match: A0A6G0NHZ3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0NHZ3_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 1.860e-6
Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 0
Query:   10 PPAEYALHSGRVGGATAMMIAGRSDTEIMKAGRWKSAVFRTYIRLSPEM-ENASSALVPGS 69
            P ++Y+ HS R+GGA A++ AG+SD  I   GRW S  F  Y RL P M  +A+S ++  S
Sbjct:  237 PRSDYSTHSLRIGGACALLAAGKSDLAIRLLGRWASWCFTVYTRLRPGMIRDAASCMIKAS 297          
BLAST of jgi.p|Trimin1|177437 vs. uniprot
Match: W2PKW8_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PKW8_PHYPN)

HSP 1 Score: 51.2 bits (121), Expect = 2.380e-6
Identity = 26/60 (43.33%), Postives = 37/60 (61.67%), Query Frame = 0
Query:   11 PAEYALHSGRVGGATAMMIAGRSDTEIMKAGRWKSAVFRTYIRLSPEM-ENASSALVPGS 69
            P +Y+ HS R+GGA A++ AG+SD  I   GRW S  F  Y RL P M  + +S+++  S
Sbjct:   56 PKDYSSHSLRIGGACALLAAGKSDLVIRLMGRWSSWCFIVYTRLKPGMIRDVASSMIKAS 115          
BLAST of jgi.p|Trimin1|177437 vs. uniprot
Match: A0A6A4FZM8_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FZM8_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 2.640e-6
Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 0
Query:   10 PPAEYALHSGRVGGATAMMIAGRSDTEIMKAGRWKSAVFRTYIRLSPEM-ENASSALVPGS 69
            P ++Y+ HS R+GGA A++ AG+SD  I   GRW S  F  Y RL P M  +A+S ++  S
Sbjct:  420 PRSDYSTHSLRIGGACALLAAGKSDLVIRLLGRWASWCFTVYTRLRPGMIRDAASCMIKAS 480          
BLAST of jgi.p|Trimin1|177437 vs. uniprot
Match: W2PLJ7_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PLJ7_PHYPN)

HSP 1 Score: 52.8 bits (125), Expect = 2.670e-6
Identity = 26/60 (43.33%), Postives = 37/60 (61.67%), Query Frame = 0
Query:   11 PAEYALHSGRVGGATAMMIAGRSDTEIMKAGRWKSAVFRTYIRLSPEM-ENASSALVPGS 69
            P +Y+ HS R+GGA A++ AG+SD  I   GRW S  F  Y RL P M  + +S+++  S
Sbjct:  697 PKDYSSHSLRIGGACALLAAGKSDLVIRLMGRWSSRCFTVYTRLKPGMIRDVASSMIKAS 756          
BLAST of jgi.p|Trimin1|177437 vs. uniprot
Match: W2QZY1_PHYPN (Uncharacterized protein n=5 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QZY1_PHYPN)

HSP 1 Score: 52.8 bits (125), Expect = 2.700e-6
Identity = 26/60 (43.33%), Postives = 38/60 (63.33%), Query Frame = 0
Query:   11 PAEYALHSGRVGGATAMMIAGRSDTEIMKAGRWKSAVFRTYIRLSPEM-ENASSALVPGS 69
            P +Y+ HS R+GGA A++ AG+SD  I   GRW S  F  Y RL P +  +A+S+++  S
Sbjct: 1101 PKDYSAHSLRIGGACALLAAGKSDLVIRLMGRWSSWCFTVYTRLKPAIIRDAASSMIKAS 1160          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|177437 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A835Z9A7_9STRA5.720e-41100.00Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A6H5KN32_9PHAE6.410e-945.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8A0_9PHAE7.630e-849.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZQ1_9PHAE9.890e-748.00Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A662XNI5_9STRA1.700e-645.00Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A6G0NHZ3_9STRA1.860e-644.26Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
W2PKW8_PHYPN2.380e-643.33Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
A0A6A4FZM8_9STRA2.640e-644.26Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]
W2PLJ7_PHYPN2.670e-643.33Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
W2QZY1_PHYPN2.700e-643.33Uncharacterized protein n=5 Tax=Phytophthora paras... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013762Integrase-like, catalytic domain superfamilyGENE3D1.10.443.10Intergrase catalytic corecoord: 3..54
e-value: 1.5E-8
score: 36.6
IPR011010DNA breaking-rejoining enzyme, catalytic coreSUPERFAMILY56349DNA breaking-rejoining enzymescoord: 12..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_151contigContig_151:186781..186990 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|177437mRNA_15172Tribonema minus UTEX_B_3156 mRNAContig_151 186781..186990 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|177437|e_gw1.151.62.1 ID=Trimin1|177437|e_gw1.151.62.1|Name=jgi.p|Trimin1|177437|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=70bp
MVSIVGGEGPPAEYALHSGRVGGATAMMIAGRSDTEIMKAGRWKSAVFRT
YIRLSPEMENASSALVPGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013762Integrase-like_cat_sf
IPR011010DNA_brk_join_enz