Trimin1|176882|e_gw1.143.94.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|176882
Unique NameTrimin1|176882|e_gw1.143.94.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length146
Homology
[Close]
BLAST of jgi.p|Trimin1|176882 vs. uniprot
Match: A0A835ZDL7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDL7_9STRA)

HSP 1 Score: 283 bits (723), Expect = 2.220e-96
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0 
Query:    1 MQLVLFGATFATGTYDNGNFVSLLHFPAENTDQTVFYFRLTEDLGGVNVYRKQLALRSTDSSMQASYAGGRSACSIMVSPKSEIANVDIVVLAQELLTSGFFITGLNEGVVQDLKIQLSTITAFPNNTDITVDYMLVSSCIHANH 145
            MQLVLFGATFATGTYDNGNFVSLLHFPAENTDQTVFYFRLTEDLGGVNVYRKQLALRSTDSSMQASYAGGRSACSIMVSPKSEIANVDIVVLAQELLTSGFFITGLNEGVVQDLKIQLSTITAFPNNTDITVDYMLVSSCIHANH
Sbjct:    1 MQLVLFGATFATGTYDNGNFVSLLHFPAENTDQTVFYFRLTEDLGGVNVYRKQLALRSTDSSMQASYAGGRSACSIMVSPKSEIANVDIVVLAQELLTSGFFITGLNEGVVQDLKIQLSTITAFPNNTDITVDYMLVSSCIHANH 145
[Close]
BLAST of jgi.p|Trimin1|176882 vs. uniprot
Match: D8LLX6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX6_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 1.640e-30
Identity = 58/135 (42.96%), Postives = 91/135 (67.41%), Query Frame = 0 
Query:    4 VLFGATFATGTYDNGNFVSLLHFPAENTDQTVFYFRLTEDLGGVNVYRKQLALRSTDSSMQASYAGGRSACSIMVSPKSEIANVDIVVLAQELLTSGFFITGLNEGVVQDLKIQLSTITAFPNNTDITVDYMLVS 138
            V+FGA++A G+YD+   V+LLH+PAENT++TVF FRLTED  GV+V R++L LR++D+ M+ S +    A  I   P  E   V ++  A+ LLT+GF++T +    + D++++LS   A+  N  +TV+Y LV+
Sbjct:   18 VIFGASYARGSYDDDRSVTLLHYPAENTEETVFVFRLTEDASGVDVLREELTLRTSDAGMETSLSESAPAEWITTLPILESNGVSVMASAENLLTNGFYVTDIQPAKLADMRLKLSETRAYQKNAGLTVEYQLVT 152
[Close]
BLAST of jgi.p|Trimin1|176882 vs. uniprot
Match: A0A6H5J8D9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8D9_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 3.760e-13
Identity = 31/51 (60.78%), Postives = 43/51 (84.31%), Query Frame = 0 
Query:    4 VLFGATFATGTYDNGNFVSLLHFPAENTDQTVFYFRLTEDLGGVNVYRKQL 54
            V+FGA++A G+YD+   V+LLH+PAENT++TVF FRLTED  GV+V R++L
Sbjct:   18 VIFGASYARGSYDDDRSVTLLHYPAENTEETVFVFRLTEDAAGVDVLREEL 68
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|176882 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835ZDL7_9STRA2.220e-96100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LLX6_ECTSI1.640e-3042.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J8D9_9PHAE3.760e-1360.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_143contigContig_143:18491..19751 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|176882mRNA_14303Tribonema minus UTEX_B_3156 mRNAContig_143 18491..19751 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|176882|e_gw1.143.94.1 ID=Trimin1|176882|e_gw1.143.94.1|Name=jgi.p|Trimin1|176882|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=146bp
MQLVLFGATFATGTYDNGNFVSLLHFPAENTDQTVFYFRLTEDLGGVNVY
RKQLALRSTDSSMQASYAGGRSACSIMVSPKSEIANVDIVVLAQELLTSG
FFITGLNEGVVQDLKIQLSTITAFPNNTDITVDYMLVSSCIHANH*
back to top