Trimin1|174646|e_gw1.116.41.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|174646
Unique NameTrimin1|174646|e_gw1.116.41.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length382
Homology
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BLAST of jgi.p|Trimin1|174646 vs. uniprot
Match: A0A836CM42_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM42_9STRA)

HSP 1 Score: 325 bits (832), Expect = 1.300e-105
Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 0 
Query:    1 MHRDVKPVVALLVLGPHGSPTAAAAFASKHVVHVKLRGRFKVDPLRVAWQESSFHKTVCVLTLEAYDGAALAHLPRSLQQLHIGCCDPVRVHHTLHALSEPGAAPALTSLSLHSCKTLRALPDALGQLMTLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGVSFTDFPALRQLEVAGCQQPVSAAADAWNRARWRRGGSSAQCAAPLPPRAAAXXAAGVDMDVAAA 381
            MHRDVKPVVALLVLGPHGSPTAAAAFASKHVVHVKLRGRFKVDPLRVAWQESSFHKTVCVLTLEAYDGAALAHLPRSLQQLHIGCCDPVRVHHTLHALSEPGAAPALTSLSLHSCKTLRALPDALGQLMTLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGVSFTDFPALRQLEVAGCQQPVSAAADAWNRARWRRGGSSAQCAAPLPPRAAAXXAAGVDMDVAAA
Sbjct:    1 MHRDVKPVVALLVLGPHGSPTAAAAFASKHVVHVKLRGRFKVDPLRVAWQESSFHKTVCVLTLEAYDGAALAHLPRSLQQLHIGCCDPVRVHHTLHALSEPGAAPALTSLSLHSCKTLRALPDALGQLMTLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGVSFTDFPALRQLEVAGCQQPVSAAADAWNRARWRRGGSSAQCAAPLPPRAAAXXAAGVDMDVAAA 381
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|174646 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CM42_9STRA1.300e-105100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 52..343
e-value: 1.9E-49
score: 169.9
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 166..287
coord: 238..334
coord: 77..187
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 72..334

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_116contigContig_116:324624..325769 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|174646mRNA_11297Tribonema minus UTEX_B_3156 mRNAContig_116 324624..325769 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|174646|e_gw1.116.41.1 ID=Trimin1|174646|e_gw1.116.41.1|Name=jgi.p|Trimin1|174646|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=382bp
MHRDVKPVVALLVLGPHGSPTAAAAFASKHVVHVKLRGRFKVDPLRVAWQ
ESSFHKTVCVLTLEAYDGAALAHLPRSLQQLHIGCCDPVRVHHTLHALSE
PGAAPALTSLSLHSCKTLRALPDALGQLMTLRALSLSWLWVLTALPETLG
DLAALTHLDISHCRALVTLPQSLGALRALTSLSVRTCHALAALPDSLGAL
PSLTALALEEHGALTRLPETLGQLAALRTLSLSYCCALARVPESLPQLGS
LTALNLFCCWALPCLPAALGRLRALAALRLRRCTALRALPASFGQLRALT
TLDLSECGRLAGLPRGVSFTDFPALRQLEVAGCQQPVSAAADAWNRARWR
RGGSSAQCAAPLPPRAAAAAAAGVDMDVAAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf