Trimin1|173336|e_gw1.101.50.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|173336
Unique NameTrimin1|173336|e_gw1.101.50.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length99
Homology
BLAST of jgi.p|Trimin1|173336 vs. uniprot
Match: A0A835ZF66_9STRA (Histone H4 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF66_9STRA)

HSP 1 Score: 185 bits (469), Expect = 4.460e-59
Identity = 94/96 (97.92%), Postives = 96/96 (100.00%), Query Frame = 0
Query:    3 GRGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENIIRDSVTYTEHARRKTVTSMDVVYALKRQGRTLYGFGG 98
            G+GLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLEN+IRDSVTYTEHARRKTVTSMDVVYALKRQGRTLYGFGG
Sbjct:    8 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTSMDVVYALKRQGRTLYGFGG 103          
BLAST of jgi.p|Trimin1|173336 vs. uniprot
Match: A0A024G0M5_9STRA (Histone H4 n=40 Tax=Stramenopiles TaxID=33634 RepID=A0A024G0M5_9STRA)

HSP 1 Score: 184 bits (466), Expect = 1.280e-58
Identity = 93/96 (96.88%), Postives = 96/96 (100.00%), Query Frame = 0
Query:    3 GRGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENIIRDSVTYTEHARRKTVTSMDVVYALKRQGRTLYGFGG 98
            G+GLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLEN+IRDSVTYTEHARRKTVT+MDVVYALKRQGRTLYGFGG
Sbjct:    8 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103          
BLAST of jgi.p|Trimin1|173336 vs. uniprot
Match: F0W2L9_9STRA (Histone H4 n=3 Tax=Stramenopiles TaxID=33634 RepID=F0W2L9_9STRA)

HSP 1 Score: 184 bits (466), Expect = 1.280e-58
Identity = 93/96 (96.88%), Postives = 96/96 (100.00%), Query Frame = 0
Query:    3 GRGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENIIRDSVTYTEHARRKTVTSMDVVYALKRQGRTLYGFGG 98
            G+GLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLEN+IRDSVTYTEHARRKTVT+MDVVYALKRQGRTLYGFGG
Sbjct:    8 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103          
BLAST of jgi.p|Trimin1|173336 vs. uniprot
Match: H4_SOLLC (Histone H4 n=13 Tax=cellular organisms TaxID=131567 RepID=H4_SOLLC)

HSP 1 Score: 183 bits (465), Expect = 1.820e-58
Identity = 92/96 (95.83%), Postives = 96/96 (100.00%), Query Frame = 0
Query:    3 GRGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENIIRDSVTYTEHARRKTVTSMDVVYALKRQGRTLYGFGG 98
            G+GLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLEN+IRDSVTYTEHARRKTVT+MDVVYALKRQGRTLYGFGG
Sbjct:    8 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103          
BLAST of jgi.p|Trimin1|173336 vs. uniprot
Match: A0A3L6V663_9STRA (Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID=A0A3L6V663_9STRA)

HSP 1 Score: 184 bits (466), Expect = 2.580e-58
Identity = 93/96 (96.88%), Postives = 96/96 (100.00%), Query Frame = 0
Query:    3 GRGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENIIRDSVTYTEHARRKTVTSMDVVYALKRQGRTLYGFGG 98
            G+GLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLEN+IRDSVTYTEHARRKTVT+MDVVYALKRQGRTLYGFGG
Sbjct:   30 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 125          
BLAST of jgi.p|Trimin1|173336 vs. uniprot
Match: A0A401RTV2_CHIPU (Histone H4 n=3 Tax=Bilateria TaxID=33213 RepID=A0A401RTV2_CHIPU)

HSP 1 Score: 183 bits (464), Expect = 2.580e-58
Identity = 93/96 (96.88%), Postives = 96/96 (100.00%), Query Frame = 0
Query:    3 GRGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENIIRDSVTYTEHARRKTVTSMDVVYALKRQGRTLYGFGG 98
            G+GLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENIIRDSVTYTEHA+RKTVT+MDVVYALKRQGRTLYGFGG
Sbjct:    8 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENIIRDSVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103          
BLAST of jgi.p|Trimin1|173336 vs. uniprot
Match: F6VFV9_HORSE (Histone H4 n=1 Tax=Equus caballus TaxID=9796 RepID=F6VFV9_HORSE)

HSP 1 Score: 183 bits (464), Expect = 2.840e-58
Identity = 92/97 (94.85%), Postives = 96/97 (98.97%), Query Frame = 0
Query:    2 TGRGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENIIRDSVTYTEHARRKTVTSMDVVYALKRQGRTLYGFGG 98
             GRGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLEN+IRD+VTYTEHA+RKTVT+MDVVYALKRQGRTLYGFGG
Sbjct:   10 VGRGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 106          
BLAST of jgi.p|Trimin1|173336 vs. uniprot
Match: B7FX68_PHATC (Histone H4 n=13 Tax=Bacillariophyta TaxID=2836 RepID=B7FX68_PHATC)

HSP 1 Score: 182 bits (463), Expect = 3.670e-58
Identity = 92/96 (95.83%), Postives = 96/96 (100.00%), Query Frame = 0
Query:    3 GRGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENIIRDSVTYTEHARRKTVTSMDVVYALKRQGRTLYGFGG 98
            G+GLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLEN+IRDSVTYTEHARRKTVT+MDVVYALKRQG+TLYGFGG
Sbjct:    8 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGKTLYGFGG 103          
BLAST of jgi.p|Trimin1|173336 vs. uniprot
Match: C1MUM2_MICPC (Histone H4 n=20 Tax=Eukaryota TaxID=2759 RepID=C1MUM2_MICPC)

HSP 1 Score: 182 bits (463), Expect = 3.670e-58
Identity = 92/96 (95.83%), Postives = 96/96 (100.00%), Query Frame = 0
Query:    3 GRGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENIIRDSVTYTEHARRKTVTSMDVVYALKRQGRTLYGFGG 98
            G+GLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLEN+IRD+VTYTEHARRKTVT+MDVVYALKRQGRTLYGFGG
Sbjct:    8 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103          
BLAST of jgi.p|Trimin1|173336 vs. uniprot
Match: A0A067CU13_SAPPC (Histone H4 n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CU13_SAPPC)

HSP 1 Score: 182 bits (463), Expect = 3.670e-58
Identity = 92/96 (95.83%), Postives = 96/96 (100.00%), Query Frame = 0
Query:    3 GRGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENIIRDSVTYTEHARRKTVTSMDVVYALKRQGRTLYGFGG 98
            G+GLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLEN+I+DSVTYTEHARRKTVT+MDVVYALKRQGRTLYGFGG
Sbjct:    8 GKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIKDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|173336 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZF66_9STRA4.460e-5997.92Histone H4 n=2 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A024G0M5_9STRA1.280e-5896.88Histone H4 n=40 Tax=Stramenopiles TaxID=33634 RepI... [more]
F0W2L9_9STRA1.280e-5896.88Histone H4 n=3 Tax=Stramenopiles TaxID=33634 RepID... [more]
H4_SOLLC1.820e-5895.83Histone H4 n=13 Tax=cellular organisms TaxID=13156... [more]
A0A3L6V663_9STRA2.580e-5896.88Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID... [more]
A0A401RTV2_CHIPU2.580e-5896.88Histone H4 n=3 Tax=Bilateria TaxID=33213 RepID=A0A... [more]
F6VFV9_HORSE2.840e-5894.85Histone H4 n=1 Tax=Equus caballus TaxID=9796 RepID... [more]
B7FX68_PHATC3.670e-5895.83Histone H4 n=13 Tax=Bacillariophyta TaxID=2836 Rep... [more]
C1MUM2_MICPC3.670e-5895.83Histone H4 n=20 Tax=Eukaryota TaxID=2759 RepID=C1M... [more]
A0A067CU13_SAPPC3.670e-5895.83Histone H4 n=5 Tax=Saprolegniaceae TaxID=4764 RepI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001951Histone H4PRINTSPR00623HISTONEH4coord: 84..95
score: 97.79
coord: 35..55
score: 93.56
coord: 15..34
score: 93.38
coord: 57..71
score: 85.49
coord: 72..84
score: 85.07
IPR001951Histone H4SMARTSM00417h44coord: 11..85
e-value: 1.5E-28
score: 110.8
IPR001951Histone H4CDDcd00076H4coord: 12..96
e-value: 3.5059E-44
score: 136.092
IPR035425CENP-T/Histone H4, histone foldPFAMPF15511CENP-T_Ccoord: 32..91
e-value: 4.4E-8
score: 33.2
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 1..98
e-value: 7.0E-55
score: 185.4
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 3..97
NoneNo IPR availablePANTHERPTHR10484:SF185HISTONE H4coord: 3..98
NoneNo IPR availablePANTHERPTHR10484HISTONE H4coord: 3..98
IPR019809Histone H4, conserved sitePROSITEPS00047HISTONE_H4coord: 10..14

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_101contigContig_101:511710..512006 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|173336mRNA_10837Tribonema minus UTEX_B_3156 mRNAContig_101 511710..512006 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|173336|e_gw1.101.50.1 ID=Trimin1|173336|e_gw1.101.50.1|Name=jgi.p|Trimin1|173336|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=99bp
MTGRGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEET
RGVLKVFLENIIRDSVTYTEHARRKTVTSMDVVYALKRQGRTLYGFGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001951Histone_H4
IPR035425CENP-T/H4_C
IPR009072Histone-fold
IPR019809Histone_H4_CS