Trimin1|172808|e_gw1.96.34.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|172808
Unique NameTrimin1|172808|e_gw1.96.34.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length151
Homology
BLAST of jgi.p|Trimin1|172808 vs. uniprot
Match: A0A835YH66_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH66_9STRA)

HSP 1 Score: 289 bits (739), Expect = 1.180e-98
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0
Query:    1 MAGTGCLICFDPLQGQLLAILSADNRLRLWDVVSGTVRQQYVEAQHLSKHFSAIAWHRPSSASAGKRRRSSSTDSAAPLGVIALGSEAGGVSIWDLQLGVQTTLTDGNARSPISCMAFSSDGSKLYTASSTDKDVVEWSMESSKILRKLK 150
            MAGTGCLICFDPLQGQLLAILSADNRLRLWDVVSGTVRQQYVEAQHLSKHFSAIAWHRPSSASAGKRRRSSSTDSAAPLGVIALGSEAGGVSIWDLQLGVQTTLTDGNARSPISCMAFSSDGSKLYTASSTDKDVVEWSMESSKILRKLK
Sbjct:    1 MAGTGCLICFDPLQGQLLAILSADNRLRLWDVVSGTVRQQYVEAQHLSKHFSAIAWHRPSSASAGKRRRSSSTDSAAPLGVIALGSEAGGVSIWDLQLGVQTTLTDGNARSPISCMAFSSDGSKLYTASSTDKDVVEWSMESSKILRKLK 150          
BLAST of jgi.p|Trimin1|172808 vs. uniprot
Match: A0A836CFG8_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFG8_9STRA)

HSP 1 Score: 146 bits (369), Expect = 6.680e-40
Identity = 74/140 (52.86%), Postives = 107/140 (76.43%), Query Frame = 0
Query:   14 QGQLLAILSADNRLRLWDVVSGTVRQQYVEAQHLSKHFSAIAWHRPS--SASAGKRRRSSSTDSAAPLGVIALGSEAGGVSIWDLQLGV-QTTLTDGNARSPISCMAFSSDGSKLYTASSTDKDVVEWSMESSKILRKLK 150
            +GQLLA++++ +R +LWDV +GT RQQYV+A+H ++  SAIAWHRP   +AS  K+R SS    A+ LG++ALGS+ G V++WDLQ GV +T L+D +A + +SC+AFS DG++LY+ S  DK VVEW +E+ ++LRKLK
Sbjct:   81 KGQLLAVVNSSSRFKLWDVTTGTARQQYVDAKHAARAVSAIAWHRPQPPAASQSKKRSSSGAQKASSLGLLALGSDDGAVTVWDLQRGVVRTVLSDPSAAAAVSCLAFSLDGTQLYSGSKDDKKVVEWGLEAGEVLRKLK 220          
BLAST of jgi.p|Trimin1|172808 vs. uniprot
Match: D7FJM9_ECTSI (Utp12 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJM9_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 2.130e-31
Identity = 70/150 (46.67%), Postives = 104/150 (69.33%), Query Frame = 0
Query:    2 AGTGCLICFDPLQGQLLAILSADNRLRLWDVVSGTVRQQYVEAQHLSKHFSAIAWHRPSSASAGKRRRSSSTDSAAPLGVIALGSEAGGVSIWDLQLGVQT-TLTDGNARSPISCMAFSSDGSKLYTASSTDKDVVEWSMESSKILRKLK 150
            + +G L  FDP  G+L A +S+DNRLR+W+  SG +RQQYVE +HL+K ++ IAWHR SS  + KR  S ++  ++ LG+IALG++ G VS+WDL+ G    +L +G     ++   FS+DGS L++ASS  K+VVEW++E+  + RKLK
Sbjct:    7 SSSGQLCIFDPASGELYASVSSDNRLRIWNTASGDLRQQYVEPRHLAKQYTCIAWHRRSSKKS-KRGSSGASKPSSSLGMIALGTDKGSVSVWDLKRGALAYSLGEGEGFPSVTSGGFSADGSSLFSASS-GKEVVEWNVETGTVARKLK 154          
BLAST of jgi.p|Trimin1|172808 vs. uniprot
Match: A0A5D6XKP2_9STRA (Utp12 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKP2_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.000e-19
Identity = 59/146 (40.41%), Postives = 90/146 (61.64%), Query Frame = 0
Query:   10 FDPLQGQLLAILSADNRLRLWDVVSGTVRQQYVEAQHLSKHFSAIAWHRPSSASAGKRRRSSSTDSAAPLGVIALGSEAGGVSIWDLQLG--VQTTLTDGNARS---PISCMAFSSDGSKLYTASSTDKDVVEWSMESSKILRKLK 150
            F P Q +  A +S DNRLR+WDV SG ++    E  HLS  ++ I W   S       +R+ ++ SAAPLG++ALG+ AG V +WDLQ G  VQT  +D +  +    ++ +AF+S GS LY++SS +K V+EW+++   + RK +
Sbjct:  348 FAPSQ-EYFAAVSEDNRLRVWDVSSGALQHDLRERDHLSYKYTCITWTLSSPLLKKSAKRAKASGSAAPLGLVALGTSAGAVVVWDLQKGEVVQTLASDKDKDAHGAAVTDVAFNSQGSLLYSSSS-EKHVLEWNVKDGAVTRKFR 491          
BLAST of jgi.p|Trimin1|172808 vs. uniprot
Match: A0A7S2V312_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V312_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.490e-19
Identity = 56/145 (38.62%), Postives = 83/145 (57.24%), Query Frame = 0
Query:    7 LICFDPLQGQLLAILSADNRLRLWDVVSGTVRQQYVEAQHLSKHFSAIAWHRPSSASAGKRRRSSS-TDSAAPLGVIALGSEAGGVSIWDLQLGVQTTLTDGNARSPISCMAFSSDGSKLYTASSTDKDVVEWSMESSKILRKLK 150
            L  FD  Q +  AI+SADNR+R+W+  +G +R  YV+ + L+  +S   W RP   S G +R SS      + LG IA+G + GGV IWDLQ GV +     + +S ++ + FS DG+ +YT S   K +  W ++S K+  K K
Sbjct:   17 LFKFDAEQ-ECCAIISADNRIRIWETSTGKLRSHYVDRKQLAVKYSCFDWWRPLQKSKGLKRNSSGKAKDLSSLGKIAVGLDHGGVIIWDLQRGVVSQRLSEDVQSSVTGIVFSQDGNIVYTVSK-GKQLSAWDLKSGKLAAKWK 159          
BLAST of jgi.p|Trimin1|172808 vs. uniprot
Match: A0A4D9D9A1_9STRA (Utp12 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9A1_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.540e-18
Identity = 50/136 (36.76%), Postives = 89/136 (65.44%), Query Frame = 0
Query:   15 GQLLAILSADNRLRLWDVVSGTVRQQYVEAQHLSKHFSAIAWHRPSSASAGKRRRSSSTDSAAPLGVIALGSEAGGVSIWDLQLGVQTT-LTDGNARSPISCMAFSSDGSKLYTASSTDKDVVEWSMESSKILRKL 149
            G+LL  ++ DNR+R++   +GT+RQ+Y+E  H +  ++ +AW +  + +     + +   S A +G++ALG++ G VS+WDL  GV    L +G +    + MAFS+DGS+LYT+++ D+DV+EWS+ + +  R+L
Sbjct:    8 GELLVHVATDNRIRVYSAAAGTLRQKYIEKDHFAFQYTCLAWMQGLAWNDKNLTKVAHNPSNA-MGLLALGTDRGCVSVWDLTRGVLARRLGEGQSLKRFTGMAFSADGSRLYTSNAGDEDVLEWSLGTGECRRRL 142          
BLAST of jgi.p|Trimin1|172808 vs. uniprot
Match: A0A6A5AM11_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AM11_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 3.920e-17
Identity = 49/153 (32.03%), Postives = 96/153 (62.75%), Query Frame = 0
Query:    7 LICFDPLQGQLLAILSADNRLRLWDVVSGTVRQQYVEAQHLSKHFSAIAWHRPS---SASAGKRRRSSSTDSAAPLGVIALGSEAGGVSIWDLQLG------VQTTLTDGNARSPISCMAFSSDGSKLYTASSTDKDVVEWSMESSKILRKLK 150
            L  F P Q   ++I S DNR+++WDV SG++RQ+  E  HL+  ++++AW + S   ++S+   ++ +   + + LGV+ALG+  G + +W+L+ G       + T  +G+A + ++ + F+S G+ L++ SS +K+V+EW+++ + + RK K
Sbjct:   10 LAAFSPCQSFFVSI-SDDNRVKVWDVASGSLRQELKERDHLTYKYTSLAWTKASPWAASSSSSSKKGTKRSATSDLGVLALGTTTGAIVVWNLEKGEVGVRLARETSENGHAAA-VTDIVFASSGATLFS-SSNEKNVLEWNVKDASVTRKFK 159          
BLAST of jgi.p|Trimin1|172808 vs. uniprot
Match: A0A484E0A9_BRELC (Utp12 domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E0A9_BRELC)

HSP 1 Score: 86.3 bits (212), Expect = 8.610e-17
Identity = 51/135 (37.78%), Postives = 84/135 (62.22%), Query Frame = 0
Query:   19 AILSADNRLRLWDVVSGTVRQQYVEAQHLSKHFSAIAWHRPSSASAGKRRRSSSTDSAAPLGVIALGSEAGGVSIWDLQLGVQTTLTDGNA---RSPISCMAFSSDGSKLYTASSTDKDVVEWSMESSKILRKLK 150
            A +S D RL++WDV+SG+++Q+  E  HLS  ++++AW +P + +   ++RSS+ D    LG++ALG+ +G + +WDL  G        NA    S +  +AF+  GS LY+ SS +K V+EWS+ S  + RK +
Sbjct:   12 ATVSEDGRLKVWDVLSGSLQQELKERDHLSYRYTSVAWTQPKNKT---KKRSSAND----LGLLALGTSSGTIILWDLATGDVKHTLQANAVHGASVVQALAFNPQGSLLYS-SSKEKHVLEWSISSGSVERKFR 138          
BLAST of jgi.p|Trimin1|172808 vs. uniprot
Match: A0A6G0WWJ7_9STRA (Utp12 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WWJ7_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.160e-16
Identity = 52/149 (34.90%), Postives = 94/149 (63.09%), Query Frame = 0
Query:    7 LICFDPLQGQLLAILSADNRLRLWDVVSGTVRQQYVEAQHLSKHFSAIAWHRPSSASAGKRRRSSSTDSAAPLGVIALGSEAGGVSIWDLQLG-VQTTLTDGNARS----PISCMAFSSDGSKLYTASSTDKDVVEWSMESSKILRKLK 150
            L  F P Q   ++I S DNR+++WDV SG++RQ+  E  HL+  ++++AW + S  +  K +R++++D    LGV+ALG+  G + +W+L+ G V   L+  N+ +     ++ + F+S G+ LY+A+ T+K V+EW+++   + RK K
Sbjct:    8 LAAFSPCQSFFVSI-SDDNRVKIWDVASGSLRQELKERDHLNYKYTSLAWTKASVWAGKKAKRTANSD----LGVLALGTTTGAIVVWNLEKGEVAQRLSRENSENGHAAAVTDIVFTSCGATLYSAA-TEKHVLEWNVKEGSVHRKFK 150          
BLAST of jgi.p|Trimin1|172808 vs. uniprot
Match: A0A485LGV1_9STRA (Aste57867_21150 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LGV1_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.160e-16
Identity = 52/151 (34.44%), Postives = 97/151 (64.24%), Query Frame = 0
Query:    7 LICFDPLQGQLLAILSADNRLRLWDVVSGTVRQQYVEAQHLSKHFSAIAWHRPSSASAGKR--RRSSSTDSAAPLGVIALGSEAGGVSIWDLQLG-VQTTLTDGNARS----PISCMAFSSDGSKLYTASSTDKDVVEWSMESSKILRKLK 150
            L  F P Q   ++I S DNR+++WDV +G++RQ+  E  HL+  ++++AW + S  S+GK+  +R++S +    LG++ALG+  G + +W+L+ G V   L+  N+ +     ++ + F+S G+ L++AS T+K+V+EW+++   + RK K
Sbjct:    9 LAAFSPCQSFFISI-SDDNRVKIWDVAAGSLRQELKERDHLNYKYTSLAWTKTSVWSSGKKGNKRAASGE----LGMLALGTTTGAIVVWNLEKGEVAQRLSRDNSENGHAAAVTDIVFASSGATLFSAS-TEKNVLEWNVKDGSVARKFK 153          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|172808 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A835YH66_9STRA1.180e-98100.00WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A836CFG8_9STRA6.680e-4052.86WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
D7FJM9_ECTSI2.130e-3146.67Utp12 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A5D6XKP2_9STRA1.000e-1940.41Utp12 domain-containing protein n=1 Tax=Pythium br... [more]
A0A7S2V312_9STRA1.490e-1938.62Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A4D9D9A1_9STRA1.540e-1836.76Utp12 domain-containing protein n=2 Tax=Monodopsid... [more]
A0A6A5AM11_9STRA3.920e-1732.03Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A484E0A9_BRELC8.610e-1737.78Utp12 domain-containing protein n=1 Tax=Bremia lac... [more]
A0A6G0WWJ7_9STRA1.160e-1634.90Utp12 domain-containing protein n=1 Tax=Aphanomyce... [more]
A0A485LGV1_9STRA1.160e-1634.44Aste57867_21150 protein n=1 Tax=Aphanomyces stella... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 5..150
e-value: 8.7E-18
score: 66.2
NoneNo IPR availablePANTHERPTHR44267WD REPEAT-CONTAINING PROTEIN 43coord: 9..150
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 8..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_96contigContig_96:394092..394701 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|172808mRNA_13071Tribonema minus UTEX_B_3156 mRNAContig_96 394092..394701 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|172808|e_gw1.96.34.1 ID=Trimin1|172808|e_gw1.96.34.1|Name=jgi.p|Trimin1|172808|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=151bp
MAGTGCLICFDPLQGQLLAILSADNRLRLWDVVSGTVRQQYVEAQHLSKH
FSAIAWHRPSSASAGKRRRSSSTDSAAPLGVIALGSEAGGVSIWDLQLGV
QTTLTDGNARSPISCMAFSSDGSKLYTASSTDKDVVEWSMESSKILRKLK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf