Trimin1|172016|e_gw1.88.102.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|172016
Unique NameTrimin1|172016|e_gw1.88.102.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length176
Homology
BLAST of jgi.p|Trimin1|172016 vs. uniprot
Match: A0A835YRH2_9STRA (Deoxyribodipyrimidine photolyase 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRH2_9STRA)

HSP 1 Score: 355 bits (910), Expect = 6.500e-124
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
Query:    1 MALPTKLPPGIQAERVQRLNSLPPSGDGKYVLYWMQRSVRTEYNHALEYAIHTANAMGLPVCVLFVLTQGYPGANERHYAFLLQGLADALSALQRRGVRLATRLARDGSVPAAVLRHAADAAVLVTDRGYTRVLRGWREEVGGGAQCAVVQVCRCGVVWRRVGSNVFSDPPYLAQ 175
            MALPTKLPPGIQAERVQRLNSLPPSGDGKYVLYWMQRSVRTEYNHALEYAIHTANAMGLPVCVLFVLTQGYPGANERHYAFLLQGLADALSALQRRGVRLATRLARDGSVPAAVLRHAADAAVLVTDRGYTRVLRGWREEVGGGAQCAVVQVCRCGVVWRRVGSNVFSDPPYLAQ
Sbjct:    1 MALPTKLPPGIQAERVQRLNSLPPSGDGKYVLYWMQRSVRTEYNHALEYAIHTANAMGLPVCVLFVLTQGYPGANERHYAFLLQGLADALSALQRRGVRLATRLARDGSVPAAVLRHAADAAVLVTDRGYTRVLRGWREEVGGGAQCAVVQVCRCGVVWRRVGSNVFSDPPYLAQ 175          
BLAST of jgi.p|Trimin1|172016 vs. uniprot
Match: UPI001AEA4742 (deoxyribodipyrimidine photo-lyase n=1 Tax=Microlunatus capsulatus TaxID=99117 RepID=UPI001AEA4742)

HSP 1 Score: 152 bits (385), Expect = 6.330e-41
Identity = 82/149 (55.03%), Postives = 100/149 (67.11%), Query Frame = 0
Query:    4 PTKLPPGIQAERVQRLNSLPPSGDGKYVLYWMQRSVRTEYNHALEYAIHTANAMGLPVCVLFVLTQGYPGANERHYAFLLQGLADALSALQRRGVRLATRLARDGSVPAAVLRHAADAAVLVTDRGYTRVLRGWREEVGGGAQCAVVQV 152
            P  + PGIQAERVQ+LN      DG+YVLYWMQ++ RT  NHALE A+H ANA+GLP+ V F L   YP AN RHY FL+ GLAD  +AL+RR +     + + G+     LR AADAA++V DRGY R  R WRE +  GA CAVVQV
Sbjct:   11 PVDVHPGIQAERVQQLNDADVREDGRYVLYWMQQAQRTVLNHALELAVHRANALGLPLLVAFGLMDDYPEANLRHYHFLVHGLADVAAALRRREIPF---VVQRGAPDEVALRLAADAALVVCDRGYLRPQRAWRERLAAGAGCAVVQV 156          
BLAST of jgi.p|Trimin1|172016 vs. uniprot
Match: A0A3Q9J214_9MICO (Deoxyribodipyrimidine photo-lyase n=1 Tax=Microbacterium lemovicicum TaxID=1072463 RepID=A0A3Q9J214_9MICO)

HSP 1 Score: 146 bits (369), Expect = 1.260e-38
Identity = 72/143 (50.35%), Postives = 99/143 (69.23%), Query Frame = 0
Query:   10 GIQAERVQRLNSLPPSGDGKYVLYWMQRSVRTEYNHALEYAIHTANAMGLPVCVLFVLTQGYPGANERHYAFLLQGLADALSALQRRGVRLATRLARDGSVPAAVLRHAADAAVLVTDRGYTRVLRGWREEVGGGAQCAVVQV 152
            GIQ+ERVQ+LN +   GDG YVLYWMQ+S R E+NHALEYA+H AN +  P+ V F +T+ YP A ERHY+F+L+GLAD   AL++RG+   T +A+ G+      + + DA+++VTDRGY R+   WR+ V   A   V+QV
Sbjct:   17 GIQSERVQQLNDIEEIGDGAYVLYWMQQSQRAEFNHALEYAVHRANELDQPILVCFGITEDYPDAQERHYSFMLEGLADVAEALEKRGI---TFVAQRGTPDDVAAKLSKDASLVVTDRGYLRIQGQWRDRVAKDADVPVIQV 156          
BLAST of jgi.p|Trimin1|172016 vs. uniprot
Match: A0A7V2UB29_9BACT (Deoxyribodipyrimidine photolyase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V2UB29_9BACT)

HSP 1 Score: 145 bits (367), Expect = 1.830e-38
Identity = 80/142 (56.34%), Postives = 97/142 (68.31%), Query Frame = 0
Query:   11 IQAERVQRLNSLPPSGDGKYVLYWMQRSVRTEYNHALEYAIHTANAMGLPVCVLFVLTQGYPGANERHYAFLLQGLADALSALQRRGVRLATRLARDGSVPAAVLRHAADAAVLVTDRGYTRVLRGWREEVGGGAQCAVVQV 152
            +Q ERV+RLN   P  DG YVLYWMQ S R E+NHALEYA+  AN   LPV  LF LT  YP AN RHYAF+L+GL +  +A+++RG++L   + R GS   A +  AADAA+LV DRGYTRV R WR+ V   A C VVQV
Sbjct:    2 VQPERVRRLNDEWPR-DGAYVLYWMQASQRAEWNHALEYAVAEANQRALPVVALFGLTDAYPEANLRHYAFMLEGLRETQAAMRQRGIQL---VVRRGSPDEAAVTMAADAALLVADRGYTRVQRQWRQHVARRAPCPVVQV 139          
BLAST of jgi.p|Trimin1|172016 vs. uniprot
Match: A0A1H1TTQ5_9ACTN (Deoxyribodipyrimidine photo-lyase type II n=1 Tax=Friedmanniella luteola TaxID=546871 RepID=A0A1H1TTQ5_9ACTN)

HSP 1 Score: 145 bits (367), Expect = 2.640e-38
Identity = 80/149 (53.69%), Postives = 97/149 (65.10%), Query Frame = 0
Query:    4 PTKLPPGIQAERVQRLNSLPPSGDGKYVLYWMQRSVRTEYNHALEYAIHTANAMGLPVCVLFVLTQGYPGANERHYAFLLQGLADALSALQRRGVRLATRLARDGSVPAAVLRHAADAAVLVTDRGYTRVLRGWREEVGGGAQCAVVQV 152
            P  + PGIQAERVQ LN      DG++VLYWMQ++ R E NHALEYA+  AN +GLP+ V F L  GYP AN RHY F++ GLAD   AL+RR V     + + G+     LR AADAA++V DRGY R  R WRE V   A C+VVQV
Sbjct:   12 PADVYPGIQAERVQLLNDDAVRDDGRHVLYWMQQAQRAELNHALEYAVRRANDLGLPLLVAFGLMDGYPEANLRHYHFMVHGLADVADALRRRHVPF---VVQRGAPDEVALRLAADAALVVCDRGYLRPQRAWRERVAAEAGCSVVQV 157          
BLAST of jgi.p|Trimin1|172016 vs. uniprot
Match: A0A3N5YCL7_9DELT (Deoxyribodipyrimidine photolyase (Fragment) n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3N5YCL7_9DELT)

HSP 1 Score: 139 bits (349), Expect = 1.430e-37
Identity = 78/144 (54.17%), Postives = 92/144 (63.89%), Query Frame = 0
Query:    9 PGIQAERVQRLNSLPPSGDGKYVLYWMQRSVRTEYNHALEYAIHTANAMGLPVCVLFVLTQGYPGANERHYAFLLQGLADALSALQRRGVRLATRLARDGSVPAAVLRHAADAAVLVTDRGYTRVLRGWREEVGGGAQCAVVQV 152
            PGI A R++RLN   P   G+YVLYWMQ+S R E NHALE A+H ANA G+ + V F LT  YP AN RHYAF+L+GLA+  +AL RRG   AT +AR GS P   L     AA+ V D GY R  R WRE V   A C V+QV
Sbjct:    7 PGIPAARIRRLNDREPV-PGRYVLYWMQQSQRAELNHALEAAVHAANARGVGLVVAFGLTDNYPEANLRHYAFMLEGLAETAAALARRG---ATLIARRGSPPDVALELGRGAALTVCDCGYLRHQRAWREAVAAKASCPVIQV 146          
BLAST of jgi.p|Trimin1|172016 vs. uniprot
Match: A0A7C4EDM6_9BACT (Deoxyribodipyrimidine photolyase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A7C4EDM6_9BACT)

HSP 1 Score: 142 bits (358), Expect = 4.120e-37
Identity = 72/142 (50.70%), Postives = 94/142 (66.20%), Query Frame = 0
Query:   11 IQAERVQRLNSLPPSGDGKYVLYWMQRSVRTEYNHALEYAIHTANAMGLPVCVLFVLTQGYPGANERHYAFLLQGLADALSALQRRGVRLATRLARDGSVPAAVLRHAADAAVLVTDRGYTRVLRGWREEVGGGAQCAVVQV 152
            IQ +R++ L   P  G G+YVLYWMQ+S RT+++HALEYA+  AN  GLP+ V F L   YP ANERHYAF+LQGLAD    L+ RG+R   +      V    L +A DAA+++ DRGY R  R WRE+V  GA+C V++V
Sbjct:   14 IQPQRIRVLRQAPARG-GRYVLYWMQQSQRTDFSHALEYAVERANEAGLPLVVCFGLMDDYPEANERHYAFMLQGLADVQRGLEERGIRFVVKRGAPADV---ALHYAGDAAMVICDRGYLRHQRRWREQVADGARCPVIEV 151          
BLAST of jgi.p|Trimin1|172016 vs. uniprot
Match: A0A7W3IT62_9ACTN (Deoxyribodipyrimidine photo-lyase n=1 Tax=Microlunatus kandeliicorticis TaxID=1759536 RepID=A0A7W3IT62_9ACTN)

HSP 1 Score: 141 bits (355), Expect = 1.450e-36
Identity = 78/149 (52.35%), Postives = 93/149 (62.42%), Query Frame = 0
Query:    9 PGIQAERVQRLNSL-----PPSGDGKYVLYWMQRSVRTEYNHALEYAIHTANAMGLPVCVLFVLTQGYPGANERHYAFLLQGLADALSALQRRGVRLATRLARDGSVPAAVLRHAADAAVLVTDRGYTRVLRGWREEVGGGAQCAVVQV 152
            PGIQAERVQ LN       P   DG+YVLYWMQ+S R  +NHALE+AIH AN + LP+ V F L   YP AN RHY FLL+GLAD  + L +R +     + + G   A   R A DAA++V DRGY R  R WRE+V     CAVVQV
Sbjct:   17 PGIQAERVQHLNDHDEPTGPDDADGRYVLYWMQQSARASFNHALEFAIHRANDLELPLLVAFGLMDDYPDANARHYRFLLEGLADVEAELGKRDIAF---VLQKGEPAAVAERLAKDAALVVVDRGYLRHQRQWREDVASSVGCAVVQV 162          
BLAST of jgi.p|Trimin1|172016 vs. uniprot
Match: A0A7J4MWY0_METTF (Deoxyribodipyrimidine photolyase (Fragment) n=1 Tax=Methanothermobacter thermautotrophicus TaxID=145262 RepID=A0A7J4MWY0_METTF)

HSP 1 Score: 132 bits (332), Expect = 5.660e-36
Identity = 69/142 (48.59%), Postives = 92/142 (64.79%), Query Frame = 0
Query:   11 IQAERVQRLNSLPPSGDGKYVLYWMQRSVRTEYNHALEYAIHTANAMGLPVCVLFVLTQGYPGANERHYAFLLQGLADALSALQRRGVRLATRLARDGSVPAAVLRHAADAAVLVTDRGYTRVLRGWREEVGGGAQCAVVQV 152
            I AER++ LN   P   G YV+YWMQ SVR+ +NHALEYAI TAN++  P+ V+F LT  +P AN RHY FL++GL D  S L+ RG++L     RD S P+ +L++A DAA  VTDRGY  + + W +E  G     + QV
Sbjct:    2 IHAERIRNLNGEEPDLRGSYVVYWMQASVRSHWNHALEYAIETANSLKKPLIVVFGLTDDFPNANSRHYRFLIEGLRDVRSNLRERGIQLVVE--RD-SPPSVLLKYADDAAAAVTDRGYLDIQKEWVDEAAGALHIPLTQV 140          
BLAST of jgi.p|Trimin1|172016 vs. uniprot
Match: Q1AY95_RUBXD (Deoxyribodipyrimidine photo-lyase type II n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129 / PRD-1) TaxID=266117 RepID=Q1AY95_RUBXD)

HSP 1 Score: 138 bits (348), Expect = 1.190e-35
Identity = 76/143 (53.15%), Postives = 89/143 (62.24%), Query Frame = 0
Query:   10 GIQAERVQRLNSLPPSGDGKYVLYWMQRSVRTEYNHALEYAIHTANAMGLPVCVLFVLTQGYPGANERHYAFLLQGLADALSALQRRGVRLATRLARDGSVPAAVLRHAADAAVLVTDRGYTRVLRGWREEVGGGAQCAVVQV 152
            GIQ ERV+ LN   P   G+YVLYWMQ S R E+NHALEYA+  ANA+G  +  +F LT GYP AN RHYAF+L+GLAD    L+RRG+  A R    GS     L     AA++VTDRGY R    WRE V   A C V QV
Sbjct:    5 GIQQERVRHLNHRGPRESGEYVLYWMQASQRAEHNHALEYAVRQANALGRSLVCVFGLTDGYPEANLRHYAFMLEGLADVEKGLRRRGIGFAVRR---GSPDEVALEAGRRAALIVTDRGYLRHQVRWRENVAAEAGCRVTQV 144          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|172016 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YRH2_9STRA6.500e-124100.00Deoxyribodipyrimidine photolyase 2 n=1 Tax=Tribone... [more]
UPI001AEA47426.330e-4155.03deoxyribodipyrimidine photo-lyase n=1 Tax=Microlun... [more]
A0A3Q9J214_9MICO1.260e-3850.35Deoxyribodipyrimidine photo-lyase n=1 Tax=Microbac... [more]
A0A7V2UB29_9BACT1.830e-3856.34Deoxyribodipyrimidine photolyase n=1 Tax=Planctomy... [more]
A0A1H1TTQ5_9ACTN2.640e-3853.69Deoxyribodipyrimidine photo-lyase type II n=1 Tax=... [more]
A0A3N5YCL7_9DELT1.430e-3754.17Deoxyribodipyrimidine photolyase (Fragment) n=1 Ta... [more]
A0A7C4EDM6_9BACT4.120e-3750.70Deoxyribodipyrimidine photolyase n=1 Tax=Phycispha... [more]
A0A7W3IT62_9ACTN1.450e-3652.35Deoxyribodipyrimidine photo-lyase n=1 Tax=Microlun... [more]
A0A7J4MWY0_METTF5.660e-3648.59Deoxyribodipyrimidine photolyase (Fragment) n=1 Ta... [more]
Q1AY95_RUBXD1.190e-3553.15Deoxyribodipyrimidine photo-lyase type II n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620HUPscoord: 10..154
e-value: 5.4E-32
score: 112.5
IPR006050DNA photolyase, N-terminalPFAMPF00875DNA_photolyasecoord: 31..152
e-value: 3.4E-14
score: 53.1
IPR006050DNA photolyase, N-terminalPROSITEPS51645PHR_CRY_ALPHA_BETAcoord: 29..160
score: 23.944654
NoneNo IPR availablePANTHERPTHR10211DEOXYRIBODIPYRIMIDINE PHOTOLYASEcoord: 12..152
NoneNo IPR availableCDDcd00293USP_Likecoord: 45..159
e-value: 5.40551E-4
score: 36.1938
IPR036155Cryptochrome/photolyase, N-terminal domain superfamilySUPERFAMILY52425Cryptochrome/photolyase, N-terminal domaincoord: 30..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_88contigContig_88:275603..276858 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|172016mRNA_11038Tribonema minus UTEX_B_3156 mRNAContig_88 275603..276858 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|172016|e_gw1.88.102.1 ID=Trimin1|172016|e_gw1.88.102.1|Name=jgi.p|Trimin1|172016|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=176bp
MALPTKLPPGIQAERVQRLNSLPPSGDGKYVLYWMQRSVRTEYNHALEYA
IHTANAMGLPVCVLFVLTQGYPGANERHYAFLLQGLADALSALQRRGVRL
ATRLARDGSVPAAVLRHAADAAVLVTDRGYTRVLRGWREEVGGGAQCAVV
QVCRCGVVWRRVGSNVFSDPPYLAQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014729Rossmann-like_a/b/a_fold
IPR006050DNA_photolyase_N
IPR036155Crypto/Photolyase_N_sf