Trimin1|169590|e_gw1.65.24.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|169590
Unique Name	Trimin1\|169590\|e_gw1.65.24.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	237

Homology

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BLAST of jgi.p|Trimin1|169590 vs. uniprot
Match: A0A836CB79_9STRA (Ras family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB79_9STRA)

HSP 1 Score: 421 bits (1081), Expect = 5.790e-148
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0

Query:    1 MSTSLNPARRGTGPSTPLSSPTPATRSPSLEDDCHQPMKVILLGSSGVGKSNLIARYHSDSFSTEFMSTIGVEFVTKKIEVDGQAVWLQIWDTAGQERYAAMMKTYYRRAKGAVLVYDVTDATSFEALELWRAALGTNAAPDCVAVVAGNKCDMEPAVSAQQAQAYAQGADMAFKLTSAKTAENVRELFEELARRMVAARXXXXXXXXXXXXXAAAVRLKALPTAAQRARSYANCC 236
            MSTSLNPARRGTGPSTPLSSPTPATRSPSLEDDCHQPMKVILLGSSGVGKSNLIARYHSDSFSTEFMSTIGVEFVTKKIEVDGQAVWLQIWDTAGQERYAAMMKTYYRRAKGAVLVYDVTDATSFEALELWRAALGTNAAPDCVAVVAGNKCDMEPAVSAQQAQAYAQGADMAFKLTSAKTAENVRELFEELARRMVAARXXXXXXXXXXXXXAAAVRLKALPTAAQRARSYANCC
Sbjct:    1 MSTSLNPARRGTGPSTPLSSPTPATRSPSLEDDCHQPMKVILLGSSGVGKSNLIARYHSDSFSTEFMSTIGVEFVTKKIEVDGQAVWLQIWDTAGQERYAAMMKTYYRRAKGAVLVYDVTDATSFEALELWRAALGTNAAPDCVAVVAGNKCDMEPAVSAQQAQAYAQGADMAFKLTSAKTAENVRELFEELARRMVAARXXXXXXXXXXXXXAAAVRLKALPTAAQRARSYANCC 236

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BLAST of jgi.p|Trimin1|169590 vs. uniprot
Match: A0A835YTJ1_9STRA (GTPase Ypt3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTJ1_9STRA)

HSP 1 Score: 228 bits (582), Expect = 1.710e-72
Identity = 115/162 (70.99%), Postives = 136/162 (83.95%), Query Frame = 0

Query:   37 PMKVILLGSSGVGKSNLIARYHSDSFSTEFMSTIGVEFVTKKIEVDGQAVWLQIWDTAGQERYAAMMKTYYRRAKGAVLVYDVTDATSFEALELWRAALGTNAAPDCVAVVAGNKCDMEPAVSAQQAQAYAQGADMAFKLTSAKTAENVRELFEELARRMVA 198
            P+KV+LLG+SGVGKSNLIARYH++ FS EFMSTIGVEFVTKKIEVDG A+ LQIWDTAGQERYA+MMKTYYR+AKGA+LVYDVT  +SF++LE+WR  L  NA P CV++VAGNKCDME  V    A+AYA    M F +TSAKTA+NV  LFEE+ARR++A
Sbjct:    5 PVKVVLLGNSGVGKSNLIARYHANEFSNEFMSTIGVEFVTKKIEVDGVAIRLQIWDTAGQERYASMMKTYYRKAKGALLVYDVTSQSSFDSLEIWRKNLEANADPQCVSMVAGNKCDMEGVVDEAAARAYADAHSMGFMMTSAKTAQNVDTLFEEVARRIIA 166

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BLAST of jgi.p|Trimin1|169590 vs. uniprot
Match: A0A6H5JPX3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPX3_9PHAE)

HSP 1 Score: 197 bits (500), Expect = 3.420e-60
Identity = 104/165 (63.03%), Postives = 129/165 (78.18%), Query Frame = 0

Query:   36 QPMKVILLGSSGVGKSNLIARYHSDSFSTEFMSTIGVEFVTKKIEVDGQAVWLQIWDTAGQERYAAMMKTYYRRAKGAVLVYDVTDATSFEALELWRAALGTNAAPDCVAVVAGNKCDM-EPAVSAQQAQAYAQGADMAFKLTSAKTAENVRELFEELARRMVAA 199
            +P+KVILLG+SGVGKSNLIAR+H++ FS +F ST+GVEFVTK+I VDG  V LQIWDTAGQERYA+MMKTYYR+AKG++LVYDVT+ +SF  LE WR  L  NA P CV++VAGNK D+ +  VS +  +AYA+   MAF  TSAKT +NV E F  LAR ++ A
Sbjct:    5 EPLKVILLGNSGVGKSNLIARFHNNDFSEDFESTVGVEFVTKRITVDGVPVKLQIWDTAGQERYASMMKTYYRKAKGSLLVYDVTNRSSFVGLEAWRKHLEANADPRCVSIVAGNKSDVSDQLVSPKDGEAYARQRGMAFISTSAKTGDNVEEAFVTLARNILRA 169

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BLAST of jgi.p|Trimin1|169590 vs. uniprot
Match: D8LCK0_ECTSI (Rab11D, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK0_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 4.020e-49
Identity = 85/133 (63.91%), Postives = 104/133 (78.20%), Query Frame = 0

Query:   36 QPMKVILLGSSGVGKSNLIARYHSDSFSTEFMSTIGVEFVTKKIEVDGQAVWLQIWDTAGQERYAAMMKTYYRRAKGAVLVYDVTDATSFEALELWRAALGTNAAPDCVAVVAGNKCDM-EPAVSAQQAQAYA 167
            +P+KVILLG+SGVGKSNLIAR+H++ FS +F ST+GVEFVTK+I VDG  V LQIWDTAGQERYA+MMKTYYR+AKG++L YD T+  SF  LE WR  L  NA P CV++V GNK D+ +  VS    +AYA
Sbjct:    5 EPLKVILLGNSGVGKSNLIARFHNNDFSEDFESTVGVEFVTKRITVDGVPVKLQIWDTAGQERYASMMKTYYRKAKGSLLFYDFTNRFSFVGLEAWRKHLEANADPRCVSIVTGNKSDVSDQLVSPNDGEAYA 137

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BLAST of jgi.p|Trimin1|169590 vs. uniprot
Match: A0A6V2T6F4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2T6F4_HETAK)

HSP 1 Score: 162 bits (409), Expect = 2.890e-46
Identity = 87/164 (53.05%), Postives = 116/164 (70.73%), Query Frame = 0

Query:   36 QPMKVILLGSSGVGKSNLIARYHSDSFSTEFMSTIGVEFVTKKIEVDGQAVWLQIWDTAGQERYAAMMKTYYRRAKGAVLVYDVTDATSFEALELWRAALGTNAAPDCVAVVAGNKCDM------EPAVSAQQAQAYAQGADMAFKLTSAKTAENVRELFEELA 193
            Q  KV+LLG+SGVGKS +++R +S+ FS +F+STIGVEF+TK+++++G+ V +QIWDTAGQERYAAMM TYYR+A+GAVL Y+     SFE++E WR  L  NA PD   ++   K D+      E  V  Q+A+AYA+   M F  TSAKT ENV E F +LA
Sbjct:    9 QQYKVVLLGNSGVGKSAVLSRLYSNEFSEDFLSTIGVEFLTKQLDINGEMVKVQIWDTAGQERYAAMMGTYYRKARGAVLCYEAVRPESFESVENWRTELMKNAEPDVKIILVATKMDLAGNVAPERLVDPQRARAYARKHGMEFMETSAKTGENVNEAFIKLA 172

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BLAST of jgi.p|Trimin1|169590 vs. uniprot
Match: A0A485LS46_9STRA (Aste57867_24372 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LS46_9STRA)

HSP 1 Score: 158 bits (400), Expect = 2.150e-43
Identity = 87/157 (55.41%), Postives = 109/157 (69.43%), Query Frame = 0

Query:   39 KVILLGSSGVGKSNLIARYHSDSFSTEFMSTIGVEFVTKKIEVDGQAVWLQIWDTAGQERYAAMMKTYYRRAKGAVLVYDVTDATSFEALELWRAALGTNAAPDCVAVVAGNKCDMEPA---VSAQQAQAYAQGADMAFKLTSAKTAENVRELFEEL 192
            KVILLG+SGVGK+NL++R     FST+F STIGVEF+T  +E+DG +V  QIWDTAGQER+ AMM TYYR+A GA+LV+DVTD T+F+ ++ W   L   A P    V+ GNK D +PA   VS  +AQAYA    M +  TSAKT  NV + F EL
Sbjct:  153 KVILLGNSGVGKTNLLSRLAKGEFSTDFASTIGVEFLTHCMEIDGTSVKAQIWDTAGQERFHAMMSTYYRKAVGALLVFDVTDKTTFDGVQKWLDQLLQVAEPGLTTVLVGNKADADPAKRAVSTVEAQAYATAHHMTYVETSAKTGANVDKAFREL 309

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BLAST of jgi.p|Trimin1|169590 vs. uniprot
Match: A0A024T985_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T985_9STRA)

HSP 1 Score: 156 bits (395), Expect = 1.010e-42
Identity = 86/157 (54.78%), Postives = 109/157 (69.43%), Query Frame = 0

Query:   39 KVILLGSSGVGKSNLIARYHSDSFSTEFMSTIGVEFVTKKIEVDGQAVWLQIWDTAGQERYAAMMKTYYRRAKGAVLVYDVTDATSFEALELWRAALGTNAAPDCVAVVAGNKCDMEP---AVSAQQAQAYAQGADMAFKLTSAKTAENVRELFEEL 192
            KVILLG+SGVGK+NL++R     FST+F STIGVEF+T+ +EVDG  V  QIWDTAGQER+ AMM TYYR+A GA+LV+DVTD T+F+ ++ W   L   A P    V+ GNK D++    AVS  +AQAYA    M +  TSAKT  NV + F +L
Sbjct:  142 KVILLGNSGVGKTNLLSRLAKGEFSTDFASTIGVEFLTQVMEVDGVQVKAQIWDTAGQERFHAMMSTYYRKAVGALLVFDVTDKTTFDGIQKWLDQLVQVAEPGLATVLVGNKADVDASKRAVSTMEAQAYAASHHMMYVETSAKTGANVDKAFRDL 298

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BLAST of jgi.p|Trimin1|169590 vs. uniprot
Match: A0A067BVU4_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BVU4_SAPPC)

HSP 1 Score: 155 bits (392), Expect = 2.870e-42
Identity = 85/157 (54.14%), Postives = 109/157 (69.43%), Query Frame = 0

Query:   39 KVILLGSSGVGKSNLIARYHSDSFSTEFMSTIGVEFVTKKIEVDGQAVWLQIWDTAGQERYAAMMKTYYRRAKGAVLVYDVTDATSFEALELWRAALGTNAAPDCVAVVAGNKCDMEPA---VSAQQAQAYAQGADMAFKLTSAKTAENVRELFEEL 192
            KVILLG+SGVGK+NL++R +   FST+F STIGVEF+T  +E+DG  V  QIWDTAGQER+ AMM TYYR+A GA+LV+DV+D  SFE ++ W   L   A P   AV+ GNK D+EP+   VS  +AQ +A    M++  TSAKT  NV   F +L
Sbjct:  143 KVILLGNSGVGKTNLLSRLNKGEFSTDFASTIGVEFLTHVMEIDGANVKAQIWDTAGQERFHAMMGTYYRKAVGALLVFDVSDPVSFEGVQRWLDQLLQVAEPGLAAVLVGNKADVEPSKRMVSTAEAQKFATAHHMSYIETSAKTGANVERAFRDL 299

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BLAST of jgi.p|Trimin1|169590 vs. uniprot
Match: W4FSX7_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FSX7_9STRA)

HSP 1 Score: 154 bits (388), Expect = 1.210e-41
Identity = 85/157 (54.14%), Postives = 108/157 (68.79%), Query Frame = 0

Query:   39 KVILLGSSGVGKSNLIARYHSDSFSTEFMSTIGVEFVTKKIEVDGQAVWLQIWDTAGQERYAAMMKTYYRRAKGAVLVYDVTDATSFEALELWRAALGTNAAPDCVAVVAGNKCDME---PAVSAQQAQAYAQGADMAFKLTSAKTAENVRELFEEL 192
            KVILLG+SGVGK+NL++R     FST+F STIGVEF+T  +EVDG  V  QIWDTAGQER+ AMM TYYR+A GA+LV+DVTD T+F+ ++ W   L   A P    V+ GNK D++    AV+  +AQAYA    M +  TSAKT  NV + F +L
Sbjct:  146 KVILLGNSGVGKTNLLSRLAKGEFSTDFASTIGVEFLTHVMEVDGVPVKAQIWDTAGQERFHAMMSTYYRKAVGALLVFDVTDKTTFDGIQKWLDQLLQVAEPGLTTVLVGNKADVDLNKRAVTTAEAQAYAASHHMMYLETSAKTGSNVDKAFRDL 302

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BLAST of jgi.p|Trimin1|169590 vs. uniprot
Match: A0A6G0W803_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W803_9STRA)

HSP 1 Score: 153 bits (386), Expect = 2.180e-41
Identity = 83/157 (52.87%), Postives = 107/157 (68.15%), Query Frame = 0

Query:   39 KVILLGSSGVGKSNLIARYHSDSFSTEFMSTIGVEFVTKKIEVDGQAVWLQIWDTAGQERYAAMMKTYYRRAKGAVLVYDVTDATSFEALELWRAALGTNAAPDCVAVVAGNKCDMEP---AVSAQQAQAYAQGADMAFKLTSAKTAENVRELFEEL 192
            KVILLG+SGVGK+NL++R     FST+F STIGVEF+T  +EVDG  V  QIWDTAGQER+ AMM TYYR+A GA+LV+DVTD T+F+ ++ W   L   A P    ++ GNK D +    AV++ +AQA+A    M +  TSAKT  NV   F +L
Sbjct:  146 KVILLGNSGVGKTNLLSRLAKGEFSTDFASTIGVEFLTHSMEVDGVIVKAQIWDTAGQERFHAMMSTYYRKAVGALLVFDVTDKTTFDGIQKWLDQLLQVAEPGLATILVGNKADADASKRAVTSAEAQAFANAHHMMYVETSAKTGANVERAFRDL 302

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|169590 vs. uniprot

BLAST of jgi.p|Trimin1|169590 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CB79_9STRA	5.790e-148	100.00	Ras family-domain-containing protein n=1 Tax=Tribo...	[more]
A0A835YTJ1_9STRA	1.710e-72	70.99	GTPase Ypt3 n=1 Tax=Tribonema minus TaxID=303371 R...	[more]
A0A6H5JPX3_9PHAE	3.420e-60	63.03	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LCK0_ECTSI	4.020e-49	63.91	Rab11D, RAB family GTPase n=1 Tax=Ectocarpus silic...	[more]
A0A6V2T6F4_HETAK	2.890e-46	53.05	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A485LS46_9STRA	2.150e-43	55.41	Aste57867_24372 protein n=1 Tax=Aphanomyces stella...	[more]
A0A024T985_9STRA	1.010e-42	54.78	Uncharacterized protein n=2 Tax=Aphanomyces invada...	[more]
A0A067BVU4_SAPPC	2.870e-42	54.14	Uncharacterized protein n=3 Tax=Saprolegnia TaxID=...	[more]
W4FSX7_9STRA	1.210e-41	54.14	Uncharacterized protein n=3 Tax=Aphanomyces astaci...	[more]
A0A6G0W803_9STRA	2.180e-41	52.87	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 182..202
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 61..77 score: 34.97 coord: 174..196 score: 38.95 coord: 141..154 score: 37.2 coord: 38..59 score: 41.77 coord: 79..101 score: 53.19
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 38..199 e-value: 4.5E-70 score: 248.8
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 35..199 e-value: 1.6E-22 score: 90.8
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 43..235 e-value: 6.1E-5 score: 21.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR47977	LD21953P-RELATED	coord: 33..196
None	No IPR available	PANTHER	PTHR47977:SF51	RAS AND EF-HAND DOMAIN-CONTAINING PROTEIN	coord: 33..196
None	No IPR available	PROSITE	PS51419	RAB	coord: 31..236 score: 28.491793
None	No IPR available	CDD	cd00154	Rab	coord: 38..192 e-value: 2.66107E-64 score: 195.367
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 40..199 e-value: 3.2E-8 score: -13.2
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 39..196 e-value: 1.7E-51 score: 174.0
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 28..236 score: 15.170029
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 36..192 e-value: 3.3E-27 score: 93.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 28..229 e-value: 1.1E-56 score: 193.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 36..199

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_65	contig	Contig_65:758294..761946 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|169590	mRNA_12702	Tribonema minus UTEX_B_3156	mRNA	Contig_65 758294..761946 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|169590|e_gw1.65.24.1 ID=Trimin1|169590|e_gw1.65.24.1|Name=jgi.p|Trimin1|169590|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=237bp
MSTSLNPARRGTGPSTPLSSPTPATRSPSLEDDCHQPMKVILLGSSGVGK
SNLIARYHSDSFSTEFMSTIGVEFVTKKIEVDGQAVWLQIWDTAGQERYA
AMMKTYYRRAKGAVLVYDVTDATSFEALELWRAALGTNAAPDCVAVVAGN
KCDMEPAVSAQQAQAYAQGADMAFKLTSAKTAENVRELFEELARRMVAAR
AAAAATAAPSTSAAAAVRLKALPTAAQRARSYANCC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase