Trimin1|168103|e_gw1.55.153.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|168103
Unique NameTrimin1|168103|e_gw1.55.153.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length158
Homology
BLAST of jgi.p|Trimin1|168103 vs. uniprot
Match: A0A836CB55_9STRA (PsbP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB55_9STRA)

HSP 1 Score: 318 bits (814), Expect = 7.260e-110
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
Query:    1 MDGAVYTAQDGSFSFRYPGDFKAYSKLLKTHKQEVNYKSPTARGYEIGVAVDPVRINSLDQFGSAQEVGTKVVNVELGKDGCLEAKLLGTSSERMGDVLAYTIEYYVENTHYTSQFVAKVIIKDGRLFVCTGKCKAKDFDTYGSALREAVGSFTVTA 157
            MDGAVYTAQDGSFSFRYPGDFKAYSKLLKTHKQEVNYKSPTARGYEIGVAVDPVRINSLDQFGSAQEVGTKVVNVELGKDGCLEAKLLGTSSERMGDVLAYTIEYYVENTHYTSQFVAKVIIKDGRLFVCTGKCKAKDFDTYGSALREAVGSFTVTA
Sbjct:    1 MDGAVYTAQDGSFSFRYPGDFKAYSKLLKTHKQEVNYKSPTARGYEIGVAVDPVRINSLDQFGSAQEVGTKVVNVELGKDGCLEAKLLGTSSERMGDVLAYTIEYYVENTHYTSQFVAKVIIKDGRLFVCTGKCKAKDFDTYGSALREAVGSFTVTA 157          
BLAST of jgi.p|Trimin1|168103 vs. uniprot
Match: D7FNF2_ECTSI (Similar to photosystem II oxygen evolving complex protein PsbP in Synechococcus n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNF2_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 3.050e-49
Identity = 81/152 (53.29%), Postives = 106/152 (69.74%), Query Frame = 0
Query:    6 YTAQDGSFSFRYPGDFKAYSKLLKTHKQEVNYKSPTARGYEIGVAVDPVRINSLDQFGSAQEVGTKVVNVELGKDGCLEAKLLGTSSERMGDVLAYTIEYYVENTHYTSQFVAKVIIKDGRLFVCTGKCKAKDFDTYGSALREAVGSFTVTA 157
            Y + DGSF+ RYP  FK +SK LKTHK EVN+KS   +GYE+GVA+DPVRI SL+ FG+ +EVG +V+ VE  KDG L+ KLL TS+E+ GD+  YT++Y+VE+T     FVAKV IKD  L+ CT + K KD+    + L+  V SF V A
Sbjct:  124 YASPDGSFALRYPVGFKGFSKPLKTHKVEVNFKSEEVKGYEVGVAIDPVRIESLETFGTPEEVGARVLKVEQAKDGTLDTKLLDTSAEKQGDLSLYTLDYFVESTRGFKHFVAKVTIKDNLLYACTAQAKEKDYPQVEAELKRVVESFRVLA 275          
BLAST of jgi.p|Trimin1|168103 vs. uniprot
Match: A0A6H5JQE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQE7_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 5.840e-46
Identity = 82/152 (53.95%), Postives = 106/152 (69.74%), Query Frame = 0
Query:    6 YTAQDGSFSFRYPGDFKAYSKLLKTHKQEVNYKSPTARGYEIGVAVDPVRINSLDQFGSAQEVGTKVVNVELGKDGCLEAKLLGTSSERMGDVLAYTIEYYVENTHYTSQFVAKVIIKDGRLFVCTGKCKAKDFDTYGSALREAVGSFTVTA 157
            Y + DGSF+ RYP  FK +SK LKTHK EVN+KS   +GYE+GVA+DPVRI SL+ FG+ +EVG +V+ VE  KDG L+ KLL TS+E+ GD+  YT++Y+VENT     FVAKV IKD  L+ CT + K KD+    + L+  V SF V A
Sbjct: 1989 YASPDGSFALRYPVGFKGFSKPLKTHKVEVNFKSEEVKGYEVGVAIDPVRIESLETFGTPEEVGARVLKVEQAKDGTLDTKLLDTSAEKQGDLSLYTLDYFVENTRGFKHFVAKVTIKDNLLYACTAQAKEKDYPQVEAELKHIVESFRVPA 2140          
BLAST of jgi.p|Trimin1|168103 vs. uniprot
Match: A0A7S0QHT9_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QHT9_9CRYP)

HSP 1 Score: 118 bits (295), Expect = 1.060e-30
Identity = 65/150 (43.33%), Postives = 89/150 (59.33%), Query Frame = 0
Query:    6 YTAQDGSFSFRYPGDFKAYSKLLKTHKQEVNYKSPTARGYEIGVAVDPVRINSLDQFGSAQEVGTKVVNVELGKDGCLEAKLLGTSSERMGDVLAYTIEYYVENTHYTSQFVAKVIIKDGRLFVCTGKCKAKDFDTYGSALREAVGSFTV 155
            Y +    FS  YP  ++A  K +KTH +EVN  S T++G E+GV+VDPV+I+++  FG+  +VG +VV +E  KDG L AKL+    E    V  YTIEY  E+T    +F+AKV I   RLFV T + K   F    +ALR  + SF V
Sbjct:   24 YRSDKEGFSVDYPAAWRASQKPVKTHLEEVNLLSDTSKGTELGVSVDPVKIDTVTAFGTPLQVGKRVVALERSKDGVLSAKLIAVGQEDRDGVPYYTIEYASESTRGNRRFLAKVAIVRRRLFVLTAQAKTDSFAADEAALRAGLASFAV 173          
BLAST of jgi.p|Trimin1|168103 vs. uniprot
Match: A0A7S2WW61_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW61_9STRA)

HSP 1 Score: 118 bits (295), Expect = 4.140e-30
Identity = 63/149 (42.28%), Postives = 91/149 (61.07%), Query Frame = 0
Query:    8 AQDGSFSFRYPGDFKAYSKLLKTHKQEVNYKSPTARGYEIGVAVDPVRINSLDQFGSAQEVGTKVVNVELGKDGCLEAKLLGTSSERMGD---VLAYTIEYYVENTHYTSQFVAKVIIKDGRLFVCTGKCKAKDFDTYGSALREAVGSF 153
            A+DG++ F YP  F   SK LKTH  EVN KS   RGY  G+AVDP++I SL+ FG    VG +VV VE  KDG L A L+G  +ER  D   ++ Y ++Y  E+T   ++F++++ I++G+L V T + K  DF +  +  R+   SF
Sbjct:   78 AEDGTYEFSYPAGFAVTSKPLKTHLVEVNVKSEAVRGYSAGLAVDPIKIPSLEAFGDPTTVGNRVVGVERRKDGVLSADLVG--AERAQDARGIVYYDLDYVAESTRGNNRFLSRIAIREGKLHVFTVQTKQADFGSVEAEARDMAQSF 224          
BLAST of jgi.p|Trimin1|168103 vs. uniprot
Match: A0A0G4EN49_VITBC (PsbP domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EN49_VITBC)

HSP 1 Score: 104 bits (259), Expect = 9.010e-26
Identity = 51/123 (41.46%), Postives = 76/123 (61.79%), Query Frame = 0
Query:   33 QEVNYKSPTARGYEIGVAVDPVRINSLDQFGSAQEVGTKVVNVELGKDGCLEAKLLGTSSERMGDVLAYTIEYYVENTHYTSQFVAKVIIKDGRLFVCTGKCKAKDFDTYGSALREAVGSFTV 155
            +E+NYKSP  +GY +GVAVDPV+I+SL  FG+   VG ++V+VE  KDG ++ +LL   S   G  + Y +EY  + T   + F+ +VI+ + RLF  T + K KDFD     ++  V +F V
Sbjct:    5 EEINYKSPEIKGYTVGVAVDPVKIDSLAAFGTPDFVGQRIVDVEKKKDGVIDVQLLKAESLESGGQVFYEVEYTSDTTRGFNHFITRVIVVNQRLFAFTAQSKQKDFDKVRDQMKAIVSTFVV 127          
BLAST of jgi.p|Trimin1|168103 vs. uniprot
Match: A0A7R9WT23_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WT23_9STRA)

HSP 1 Score: 106 bits (264), Expect = 6.780e-25
Identity = 60/156 (38.46%), Postives = 86/156 (55.13%), Query Frame = 0
Query:    4 AVYT--AQDGSFSFRYPGDFKAYSKLLKTHKQEVNYKSPTARGYEIGVAVDPVRINSLDQFGSAQEVGTKVVNVELGKDGCLEAKLLGTSSERMGDVLAYTIEYYVENTHYTSQFVAKVIIKDGRLFVCTGKCKAKDFDTYGSALREAVGSFTVTA 157
            AVYT   ++ +++FR P DF    K L+TH +EVN+ S T +GY+ G+ VDPVRI SL QFG+ +EV  +VV  E+ +DG  E  L+  S     D  +Y +EY  +       FV K+ +   +L+V T + K  DF    S   E  G+ T  A
Sbjct:  139 AVYTKTTKEFAYAFRPPTDFSNTKKPLQTHLEEVNFVSDTTKGYQYGITVDPVRIESLKQFGTPEEVAARVVTAEVNRDGVFEVTLV--SDPIASDDGSYVLEYLSDGKRGKKHFVTKIFVSKKKLYVLTAQAKEVDF---ASVKEELFGTLTTFA 289          
BLAST of jgi.p|Trimin1|168103 vs. uniprot
Match: A0A7S4FYE0_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FYE0_9EUGL)

HSP 1 Score: 103 bits (257), Expect = 1.930e-23
Identity = 56/152 (36.84%), Postives = 91/152 (59.87%), Query Frame = 0
Query:    7 TAQ--DGSFSFRYPGDFKAYSKLLKTHKQEVNYKSPTARGYEIGVAVDPVRINSLDQFGSAQEVGTKVVNVELGKDGCLEAKLLGTSSERMGDVLAYTIEYYVENTHYTSQFVAKVIIKDGRLFVCTGKCKAKDFDTYGSALREAVGSFTVT 156
            TAQ  +G ++F YP D++   K LKTH QE+  KSPT +   +G+AVDP+++ SL++FG    V  +VVNVE  K+G  E KLL  ++     +  YT+EY V++      ++AK+ + +G L+V T K K   ++    A+++ + +  VT
Sbjct:  201 TAQVDNGRWAFDYPSDWEVIKKPLKTHFQELEVKSPTIKKCTVGIAVDPIKLASLEKFGDPTFVAERVVNVERNKNGVREVKLLDAANAPRDGLSYYTMEYEVDSERGYYHYLAKLTVANGFLYVLTAKVKDGSWEEGRPAVQKILDTMQVT 352          
BLAST of jgi.p|Trimin1|168103 vs. uniprot
Match: A0A7S0BSD6_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BSD6_9RHOD)

HSP 1 Score: 100 bits (249), Expect = 2.610e-23
Identity = 56/144 (38.89%), Postives = 84/144 (58.33%), Query Frame = 0
Query:   13 FSFRYPGDFKAYSKLLKTHKQEVNY-KSPTARGYEIGVAVDPVRINSLDQFGSAQEVGTKVVNVELGKDGCLEAKLLGTSSERMGDVLAYTIEYYVENTHYTSQFVAKVIIKDGRLFVCTGKCKAKDFDTYGSALREAVGSFTV 155
            ++F+YP  + A  K +KTH  EV   K  T+   ++G+ VDPV+INSL +FGS ++V  KV+ VE  KDG L  + L   S     +  Y IEY VENT    ++++++ I D  L+V TG+ K  DF +  + LR+ + S  V
Sbjct:   73 YTFKYPPAWTATKKQIKTHASEVLVVKDGTSA--QVGLVVDPVKINSLKEFGSPEQVADKVLGVEKKKDGTLSVRTLALGSFDRDGLTYYDIEYEVENTRGMKRYISRLTINDKNLYVFTGQAKIADFSSSEAELRKVLSSLYV 214          
BLAST of jgi.p|Trimin1|168103 vs. uniprot
Match: W7TH67_9STRA (Photosystem II PsbP, oxygen evolving complex n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TH67_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.290e-22
Identity = 54/124 (43.55%), Postives = 78/124 (62.90%), Query Frame = 0
Query:    8 AQDGSFSFRYPGDFKAYSKLLKTHKQEVNYKSPTARGYEIGVAVDPVRINSLDQFGSAQEVGTKVVNVELGKDGCLEAKLLGTSSERMGDVLAYTIEYYVENTHYTSQFVAKVIIKDGRLFVCT 131
            +  G F F YP  + +  KLL+TH++EV  KS    G+  GVAVDPVRI S+ Q GS  EVG ++V +E  K+G  + +LLG++ E  GD   YT +Y VE+T   ++F+A+ I+ D +L V T
Sbjct:  116 SSSGIFRFLYPETWTSAPKLLQTHQEEVTLKSKNVLGFSAGVAVDPVRIESIQQSGSPSEVGARIVALEGKKEGVSKVELLGSAQE--GDF--YTFDYEVESTRGRNRFLARAIVADKKLIVFT 235          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|168103 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CB55_9STRA7.260e-110100.00PsbP domain-containing protein n=1 Tax=Tribonema m... [more]
D7FNF2_ECTSI3.050e-4953.29Similar to photosystem II oxygen evolving complex ... [more]
A0A6H5JQE7_9PHAE5.840e-4653.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0QHT9_9CRYP1.060e-3043.33Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7S2WW61_9STRA4.140e-3042.28Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0G4EN49_VITBC9.010e-2641.46PsbP domain-containing protein n=1 Tax=Vitrella br... [more]
A0A7R9WT23_9STRA6.780e-2538.46Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S4FYE0_9EUGL1.930e-2336.84Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S0BSD6_9RHOD2.610e-2338.89Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
W7TH67_9STRA1.290e-2243.55Photosystem II PsbP, oxygen evolving complex n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002683PsbP, C-terminalPFAMPF01789PsbPcoord: 5..155
e-value: 7.9E-18
score: 65.1
NoneNo IPR availableGENE3D3.40.1000.10Mog1/PsbP, alpha/beta/alpha sandwichcoord: 3..155
e-value: 3.9E-26
score: 93.9
NoneNo IPR availablePANTHERPTHR31407FAMILY NOT NAMEDcoord: 6..155
NoneNo IPR availablePANTHERPTHR31407:SF3PSBP DOMAIN-CONTAINING PROTEIN 2, CHLOROPLASTICcoord: 6..155
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichSUPERFAMILY55724Mog1p/PsbP-likecoord: 5..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_55contigContig_55:146578..148051 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|168103mRNA_7253Tribonema minus UTEX_B_3156 mRNAContig_55 146578..148051 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|168103|e_gw1.55.153.1 ID=Trimin1|168103|e_gw1.55.153.1|Name=jgi.p|Trimin1|168103|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=158bp
MDGAVYTAQDGSFSFRYPGDFKAYSKLLKTHKQEVNYKSPTARGYEIGVA
VDPVRINSLDQFGSAQEVGTKVVNVELGKDGCLEAKLLGTSSERMGDVLA
YTIEYYVENTHYTSQFVAKVIIKDGRLFVCTGKCKAKDFDTYGSALREAV
GSFTVTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002683PsbP_C
IPR016123Mog1/PsbP_a/b/a-sand