Trimin1|166387|e_gw1.44.82.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|166387
Unique NameTrimin1|166387|e_gw1.44.82.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length314
Homology
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BLAST of jgi.p|Trimin1|166387 vs. uniprot
Match: A0A836CBU3_9STRA (Armadillo-type protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBU3_9STRA)

HSP 1 Score: 122 bits (305), Expect = 8.890e-29
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 
Query:    1 MRAHTGNAEVQRWTVALAAAGVCGAVVAVMRAHAGTADVQQRAAWAVANLCDAHPTNRTAF 61
            MRAHTGNAEVQRWTVALAAAGVCGAVVAVMRAHAGTADVQQRAAWAVANLCDAHPTNRTAF
Sbjct:    1 MRAHTGNAEVQRWTVALAAAGVCGAVVAVMRAHAGTADVQQRAAWAVANLCDAHPTNRTAF 61
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|166387 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CBU3_9STRA8.890e-29100.00Armadillo-type protein (Fragment) n=1 Tax=Tribonem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 142..184
e-value: 0.4
score: 19.7
coord: 274..314
e-value: 31.0
score: 9.4
coord: 186..228
e-value: 0.025
score: 23.8
coord: 54..96
e-value: 7.0E-4
score: 28.9
coord: 98..140
e-value: 0.017
score: 24.3
coord: 230..272
e-value: 5.9
score: 15.0
coord: 14..52
e-value: 130.0
score: 4.7
IPR000225ArmadilloPFAMPF00514Armcoord: 187..228
e-value: 1.2E-4
score: 22.0
coord: 99..140
e-value: 2.9E-5
score: 23.9
coord: 57..95
e-value: 4.4E-6
score: 26.5
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 65..109
score: 9.0124
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 212..314
e-value: 1.6E-15
score: 59.2
coord: 5..121
e-value: 2.5E-22
score: 81.5
coord: 122..211
e-value: 1.1E-17
score: 66.2
IPR040104Armadillo repeat-containing protein 6PANTHERPTHR22895:SF0ARMADILLO REPEAT-CONTAINING PROTEIN 6coord: 145..239
coord: 16..109
IPR040104Armadillo repeat-containing protein 6PANTHERPTHR22895:SF0ARMADILLO REPEAT-CONTAINING PROTEIN 6coord: 101..197
coord: 189..304
IPR040104Armadillo repeat-containing protein 6PANTHERPTHR22895:SF0ARMADILLO REPEAT-CONTAINING PROTEIN 6coord: 64..153
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 145..239
coord: 16..109
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 64..153
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 101..197
coord: 189..304
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 36..314

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_44contigContig_44:862105..863046 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|166387mRNA_9130Tribonema minus UTEX_B_3156 mRNAContig_44 862105..863046 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|166387|e_gw1.44.82.1 ID=Trimin1|166387|e_gw1.44.82.1|Name=jgi.p|Trimin1|166387|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=314bp
MRAHTGNAEVQRWTVALAAAGVCGAVVAVMRAHAGTADVQQRAAWAVANL
CDAHPTNRTAFANAGVSEPLVAAMHTHAGNADVQQQAAWAVANLCVAHPA
NRTAFANAGVSKPLVAAMRAHAENADVQQQAARAVANLCAAHPANRTAFA
DAGVSEPLVAAMRAHGENAEVQARVAQAVANLCAAHPANRTAFADAGVSE
PLVAAMHTHAENAEVQQQAARAVAYLCDAHPANSTALVDAGVCELLVAAM
SGHAGNAEVQRWTTQAVASLCFGNPANRTALADAGVCEVLVAAMRAHAGN
AEVQLCAAGAVAYL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR040104ARMC6
IPR016024ARM-type_fold