Trimin1|160681|e_gw1.14.158.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|160681
Unique NameTrimin1|160681|e_gw1.14.158.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length85
Homology
BLAST of jgi.p|Trimin1|160681 vs. uniprot
Match: A0A835ZAZ7_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAZ7_9STRA)

HSP 1 Score: 139 bits (350), Expect = 2.000e-41
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
Query:    1 QTTKMGKVFTAYASRKGLQVDQLRFMSDGKRIKAEDTPADCGLEDGDQLDCMMEAQGGFIMXXXXXXXXXXXXXXGCSTEACRR 84
            QTTKMGKVFTAYASRKGLQVDQLRFMSDGKRIKAEDTPADCGLEDGDQLDCMMEAQGGFIMXXXXXXXXXXXXXXGCSTEACRR
Sbjct:    1 QTTKMGKVFTAYASRKGLQVDQLRFMSDGKRIKAEDTPADCGLEDGDQLDCMMEAQGGFIMXXXXXXXXXXXXXXGCSTEACRR 84          
BLAST of jgi.p|Trimin1|160681 vs. uniprot
Match: D7FVD5_ECTSI (Small ubiquitin-like modifier n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVD5_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 6.250e-17
Identity = 37/58 (63.79%), Postives = 44/58 (75.86%), Query Frame = 0
Query:    1 QTTKMGKVFTAYASRKGLQVDQLRFMSDGKRIKAEDTPADCGLEDGDQLDCMMEAQGG 58
            +TT+M KVFT YASRKG+ V  LRF+ DG R+ AEDTP    LED DQ+DCM+E QGG
Sbjct:   24 KTTRMEKVFTTYASRKGVSVSALRFLLDGSRVGAEDTPTSLELEDQDQIDCMLEQQGG 81          
BLAST of jgi.p|Trimin1|160681 vs. uniprot
Match: A0A7S2UU84_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU84_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 7.970e-15
Identity = 35/58 (60.34%), Postives = 44/58 (75.86%), Query Frame = 0
Query:    1 QTTKMGKVFTAYASRKGLQVDQLRFMSDGKRIKAEDTPADCGLEDGDQLDCMMEAQGG 58
            +TT+M KVFT YASRKG+QV+ LRF+ DG+R+    TP    LED DQ+DCM+E QGG
Sbjct:   43 KTTRMEKVFTTYASRKGVQVNALRFLLDGERVNPAHTPKMLDLEDQDQIDCMLEQQGG 100          
BLAST of jgi.p|Trimin1|160681 vs. uniprot
Match: A0A835YTL0_9STRA (Ubiquitin-related domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTL0_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 4.170e-13
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 0
Query:    1 QTTKMGKVFTAYASRKGLQVDQLRFMSDGKRIKAEDTPADCGLEDGDQLDCMMEAQGGF 59
            +TT+M KVF+ YA RKG+Q   LRF+ DG R+    TP +  LED D +DCM+E QGG+
Sbjct:   39 KTTRMEKVFSTYAQRKGVQASALRFLLDGDRVDPNQTPGELDLEDQDMIDCMLEQQGGW 97          
BLAST of jgi.p|Trimin1|160681 vs. uniprot
Match: A0A7S4JPZ0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JPZ0_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 5.090e-13
Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    3 TKMGKVFTAYASRKGLQVDQLRFMSDGKRIKAEDTPADCGLEDGDQLDCMMEAQGG 58
            TKMGKVF AYA RKG+Q + +RF+ DG RI  + TP    +EDGDQ+DC +E  GG
Sbjct:   78 TKMGKVFAAYAQRKGIQQNAVRFLLDGDRIADDSTPESLDMEDGDQIDCFLEQVGG 133          
BLAST of jgi.p|Trimin1|160681 vs. uniprot
Match: B7G0R2_PHATC (Small ubiquitin-like modifier n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G0R2_PHATC)

HSP 1 Score: 67.4 bits (163), Expect = 9.720e-13
Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = 0
Query:    1 QTTKMGKVFTAYASRKGLQVDQLRFMSDGKRIKAEDTPADCGLEDGDQLDCMMEAQGG 58
            +TTKM KVF  YA+RKG+QV+ LRF+ DG RI  + TP    LED DQ+DC++E  GG
Sbjct:   35 KTTKMQKVFETYATRKGVQVNSLRFLLDGDRITPDQTPKMLELEDQDQIDCVLEQTGG 92          
BLAST of jgi.p|Trimin1|160681 vs. uniprot
Match: A0A2V0PK35_9CHLO (Small ubiquitin-related modifier n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PK35_9CHLO)

HSP 1 Score: 66.2 bits (160), Expect = 1.950e-12
Identity = 29/59 (49.15%), Postives = 41/59 (69.49%), Query Frame = 0
Query:    2 TTKMGKVFTAYASRKGLQVDQLRFMSDGKRIKAEDTPADCGLEDGDQLDCMMEAQGGFI 60
            TTKM K+F AYA +K L    ++F+ DG+R++   TPAD G+EDGD +D M+E  GG +
Sbjct:   30 TTKMEKIFKAYAEKKALNAGAVKFLFDGQRVQGHQTPADLGMEDGDSMDAMLEQLGGSL 88          
BLAST of jgi.p|Trimin1|160681 vs. uniprot
Match: A0A7S2G492_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G492_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 3.790e-12
Identity = 30/58 (51.72%), Postives = 42/58 (72.41%), Query Frame = 0
Query:    1 QTTKMGKVFTAYASRKGLQVDQLRFMSDGKRIKAEDTPADCGLEDGDQLDCMMEAQGG 58
            ++T+  KVF+ YA RKG+ V  LRF+ DG+RI    +PA+  +ED DQ+DCM+E QGG
Sbjct:   58 KSTRFEKVFSTYAQRKGVNVASLRFLIDGERINPSQSPAELDMEDQDQIDCMLEQQGG 115          
BLAST of jgi.p|Trimin1|160681 vs. uniprot
Match: A0A830HS18_9CHLO (Small ubiquitin-related modifier n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HS18_9CHLO)

HSP 1 Score: 65.1 bits (157), Expect = 5.690e-12
Identity = 30/57 (52.63%), Postives = 42/57 (73.68%), Query Frame = 0
Query:    2 TTKMGKVFTAYASRKGLQVDQLRFMSDGKRIKAEDTPADCGLEDGDQLDCMMEAQGG 58
            +TKMGKVF AYAS+K ++   ++F+ DG RIK +DTP   GLE+ D++D M+E  GG
Sbjct:   29 STKMGKVFAAYASKKSVEQRSVKFLFDGNRIKEDDTPESLGLENDDEVDAMLEMVGG 85          
BLAST of jgi.p|Trimin1|160681 vs. uniprot
Match: K3X7L8_GLOUD (Ubiquitin-like domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X7L8_GLOUD)

HSP 1 Score: 65.5 bits (158), Expect = 6.110e-12
Identity = 32/57 (56.14%), Postives = 39/57 (68.42%), Query Frame = 0
Query:    3 TKMGKVFTAYASRKGLQVDQLRFMSDGKRIKAEDTPADCGLEDGDQLDCMMEAQGGF 59
            TKM K+F+AYA RKG+ V  LRF+ DG RI  + TP    LED DQ+DC +E  GGF
Sbjct:   51 TKMEKIFSAYAQRKGVPVSALRFLLDGTRISGDQTPKMLELEDQDQIDCALEQVGGF 107          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|160681 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZAZ7_9STRA2.000e-41100.00Ubiquitin-like domain-containing protein n=1 Tax=T... [more]
D7FVD5_ECTSI6.250e-1763.79Small ubiquitin-like modifier n=2 Tax=Ectocarpus T... [more]
A0A7S2UU84_9STRA7.970e-1560.34Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835YTL0_9STRA4.170e-1352.54Ubiquitin-related domain-containing protein n=1 Ta... [more]
A0A7S4JPZ0_9STRA5.090e-1357.14Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
B7G0R2_PHATC9.720e-1356.90Small ubiquitin-like modifier n=3 Tax=Phaeodactylu... [more]
A0A2V0PK35_9CHLO1.950e-1249.15Small ubiquitin-related modifier n=1 Tax=Raphidoce... [more]
A0A7S2G492_9STRA3.790e-1251.72Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A830HS18_9CHLO5.690e-1252.63Small ubiquitin-related modifier n=1 Tax=Pycnococc... [more]
K3X7L8_GLOUD6.110e-1256.14Ubiquitin-like domain-containing protein n=2 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 1..65
e-value: 4.8E-20
score: 73.4
NoneNo IPR availablePANTHERPTHR10562SMALL UBIQUITIN-RELATED MODIFIERcoord: 1..58
NoneNo IPR availablePANTHERPTHR10562:SF14SMALL UBIQUITIN-RELATED MODIFIER 1coord: 1..58
NoneNo IPR availableCDDcd01763Ubl_SUMO_likecoord: 2..52
e-value: 1.3677E-20
score: 75.3093
IPR022617Rad60/SUMO-like domainPFAMPF11976Rad60-SLDcoord: 2..52
e-value: 3.0E-10
score: 39.8
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 1..58
score: 12.138995
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 2..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_14contigContig_14:1112509..1113544 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|160681mRNA_3251Tribonema minus UTEX_B_3156 mRNAContig_14 1112509..1113544 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|160681|e_gw1.14.158.1 ID=Trimin1|160681|e_gw1.14.158.1|Name=jgi.p|Trimin1|160681|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=85bp
QTTKMGKVFTAYASRKGLQVDQLRFMSDGKRIKAEDTPADCGLEDGDQLD
CMMEAQGGFIMMEAQGESIMMEAQGGCSTEACRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022617Rad60/SUMO-like_dom
IPR000626Ubiquitin-like_dom
IPR029071Ubiquitin-like_domsf